Gene annotation
Transcriptome id Sobic.001G046500.1
Synonym CPH, SMT1
Functional annotation C-methyltransferase, putative, expressed
UniProt A0A1B6QHB0
Pfam PF08241 PF08498
Panther DB PTHR10108 PTHR10108:SF908
NCBI CDD KOG1269; SAM-dependent methyltransferases
KEGG Orthology K00559; SMT1, sterol 24-C-methyltransferase
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process GO:0006694steroid biosynthetic process


Orthologs (automatic annotation)
TAIR AT5G13710 : sterol methyltransferase 1
RAP-DB (Rice) LOC_Os03g59290.1 : C-methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a044588 , Zm00025a016508 , Zm00025a016507
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G120800 expressed protein -
2 Sobic.002G127900 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
3 Sobic.002G075000 receptor kinase, putative, expressed -
4 Sobic.005G045700 PHD-finger family protein, expressed -
5 Sobic.003G235400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPCME, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
6 Sobic.004G285500 - -
7 Sobic.007G053100 amino acid permease family protein, putative, expressed -
8 Sobic.008G165300 Protein kinase domain containing protein, expressed -
9 Sobic.001G125400 ethylene-insensitive protein, putative, expressed -
10 Sobic.005G010800 - -
11 Sobic.003G368901 - -
12 Sobic.001G125300 ethylene-insensitive protein, putative, expressed K14513: ethylene-insensitive protein 2
13 Sobic.010G170000 Triacylglycerol biosynthesis defect 1(PubMedID : 26320239)@O-acyltransferase, putative, expressed K11155: diacylglycerol O-acyltransferase 1
14 Sobic.003G384600 expressed protein -
15 Sobic.007G221000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K16285: RING/U-box domain-containing protein
16 Sobic.002G266300 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed -
17 Sobic.003G007300 KH domain containing protein, putative, expressed K18666: activating signal cointegrator complex subunit 1
18 Sobic.001G239800 3-5 exonuclease family protein, putative, expressed K12591: RRP6, exosome complex exonuclease RRP6
19 Sobic.005G108000 - -
20 Sobic.007G103666 - -


Gene co-expression network
sample Sobic001G046500 Sobic001G046500 Sobic003G120800 Sobic003G120800 Sobic001G046500--Sobic003G120800 Sobic002G127900 Sobic002G127900 Sobic001G046500--Sobic002G127900 Sobic002G075000 Sobic002G075000 Sobic001G046500--Sobic002G075000 Sobic005G045700 Sobic005G045700 Sobic001G046500--Sobic005G045700 Sobic003G235400 Sobic003G235400 Sobic001G046500--Sobic003G235400 Sobic004G285500 Sobic004G285500 Sobic001G046500--Sobic004G285500 Sobic007G053100 Sobic007G053100 Sobic001G046500--Sobic007G053100 Sobic008G165300 Sobic008G165300 Sobic001G046500--Sobic008G165300 Sobic001G125400 Sobic001G125400 Sobic001G046500--Sobic001G125400 Sobic004G123400 Sobic004G123400 Sobic003G120800--Sobic004G123400 Sobic004G332400 Sobic004G332400 Sobic003G120800--Sobic004G332400 Sobic003G007300 Sobic003G007300 Sobic003G120800--Sobic003G007300 Sobic002G126300 Sobic002G126300 Sobic003G120800--Sobic002G126300 Sobic008G002500 Sobic008G002500 Sobic003G120800--Sobic008G002500 Sobic003G294600 Sobic003G294600 Sobic003G120800--Sobic003G294600 Sobic008G088851 Sobic008G088851 Sobic003G120800--Sobic008G088851 Sobic005G178800 Sobic005G178800 Sobic003G120800--Sobic005G178800 Sobic003G120800--Sobic001G046500 Sobic002G127900--Sobic005G045700 Sobic002G127900--Sobic008G165300 Sobic002G127900--Sobic007G053100 Sobic003G368901 Sobic003G368901 Sobic002G127900--Sobic003G368901 Sobic002G266300 Sobic002G266300 Sobic002G127900--Sobic002G266300 Sobic006G262501 Sobic006G262501 Sobic002G127900--Sobic006G262501 Sobic010G264900 Sobic010G264900 Sobic002G127900--Sobic010G264900 Sobic009G155900 Sobic009G155900 Sobic002G127900--Sobic009G155900 Sobic001G125300 Sobic001G125300 Sobic002G127900--Sobic001G125300 Sobic005G184700 Sobic005G184700 Sobic002G075000--Sobic005G184700 Sobic002G075000--Sobic001G125400 Sobic005G184800 Sobic005G184800 Sobic002G075000--Sobic005G184800 Sobic001G122600 Sobic001G122600 Sobic002G075000--Sobic001G122600 Sobic005G045700--Sobic002G127900 Sobic005G045700--Sobic007G053100 Sobic005G045700--Sobic002G266300 Sobic002G054400 Sobic002G054400 Sobic005G045700--Sobic002G054400 Sobic005G045700--Sobic003G368901 Sobic005G045700--Sobic001G125300 Sobic009G012600 Sobic009G012600 Sobic005G045700--Sobic009G012600 Sobic008G191850 Sobic008G191850 Sobic005G045700--Sobic008G191850 Sobic005G045700--Sobic006G262501 Sobic002G261600 Sobic002G261600 Sobic003G235400--Sobic002G261600 Sobic006G012000 Sobic006G012000 Sobic003G235400--Sobic006G012000 Sobic003G235400--Sobic007G053100 Sobic003G235400--Sobic002G075000 Sobic004G188800 Sobic004G188800 Sobic003G235400--Sobic004G188800 Sobic003G235400--Sobic001G125400 Sobic006G251500 Sobic006G251500 Sobic003G235400--Sobic006G251500 Sobic003G384600 Sobic003G384600 Sobic003G235400--Sobic003G384600 Sobic003G427300 Sobic003G427300 Sobic003G235400--Sobic003G427300 Sobic010G164150 Sobic010G164150 Sobic004G285500--Sobic010G164150 Sobic004G285500--Sobic001G125400 Sobic010G179300 Sobic010G179300 Sobic004G285500--Sobic010G179300 Sobic002G366300 Sobic002G366300 Sobic004G285500--Sobic002G366300 Sobic007G025600 Sobic007G025600 Sobic004G285500--Sobic007G025600 Sobic004G137400 Sobic004G137400 Sobic004G285500--Sobic004G137400 Sobic009G246250 Sobic009G246250 Sobic004G285500--Sobic009G246250 Sobic009G103800 Sobic009G103800 Sobic004G285500--Sobic009G103800 Sobic001G344300 Sobic001G344300 Sobic004G285500--Sobic001G344300 Sobic007G053100--Sobic002G266300 Sobic007G053100--Sobic006G251500 Sobic006G053200 Sobic006G053200 Sobic007G053100--Sobic006G053200 Sobic007G053100--Sobic001G125400 Sobic007G053100--Sobic005G045700 Sobic004G033200 Sobic004G033200 Sobic007G053100--Sobic004G033200 Sobic007G053100--Sobic003G427300 Sobic004G066500 Sobic004G066500 Sobic007G053100--Sobic004G066500 Sobic007G053100--Sobic002G127900 Sobic008G165300--Sobic001G125400 Sobic008G018100 Sobic008G018100 Sobic008G165300--Sobic008G018100 Sobic006G083900 Sobic006G083900 Sobic008G165300--Sobic006G083900 Sobic008G165300--Sobic002G127900 Sobic008G165300--Sobic010G179300 Sobic001G393101 Sobic001G393101 Sobic008G165300--Sobic001G393101 Sobic008G165300--Sobic002G266300 Sobic006G217800 Sobic006G217800 Sobic008G165300--Sobic006G217800 Sobic003G434300 Sobic003G434300 Sobic008G165300--Sobic003G434300 Sobic001G125400--Sobic001G122600
Octagon: transcription factors


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