Gene annotation
Transcriptome id Sobic.007G103666.1
Synonym -
Functional annotation -
UniProt A0A1Z5RA74
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G029800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
2 Sobic.001G301700 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
3 Sobic.001G375600 transmembrane protein, putative, expressed -
4 Sobic.001G438600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dihydrodipicolinate reductase, putative, expressed K00215: 4-hydroxy-tetrahydrodipicolinate reductase
5 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
6 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
7 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
8 Sobic.006G040500 phospholipid-transporting ATPase 2, putative, expressed K01530: phospholipid-translocating ATPase
9 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
10 Sobic.004G261900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
11 Sobic.003G279900 bacterial transferase hexapeptide domain containing protein, expressed K00677: UDP-N-acetylglucosamine acyltransferase
12 Sobic.004G355000 SAC9, putative, expressed -
13 Sobic.004G005100 peptidase family C78 domain containing protein, expressed -
14 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
15 Sobic.003G247300 protein of unknown function DUF1296 domain containing protein, expressed -
16 Sobic.007G060201 - -
17 Sobic.001G037100 expressed protein K19026: spatacsin
18 Sobic.010G205200 Ser/Thr protein phosphatase family protein, putative, expressed -
19 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
20 Sobic.003G246100 AMSH-like protease, putative, expressed K11866: STAMBP, STAM-binding protein


Gene co-expression network
sample Sobic007G103666 Sobic007G103666 Sobic003G029800 Sobic003G029800 Sobic007G103666--Sobic003G029800 Sobic001G301700 Sobic001G301700 Sobic007G103666--Sobic001G301700 Sobic001G375600 Sobic001G375600 Sobic007G103666--Sobic001G375600 Sobic001G438600 Sobic001G438600 Sobic007G103666--Sobic001G438600 Sobic001G207400 Sobic001G207400 Sobic007G103666--Sobic001G207400 Sobic002G430000 Sobic002G430000 Sobic007G103666--Sobic002G430000 Sobic001G015500 Sobic001G015500 Sobic007G103666--Sobic001G015500 Sobic006G040500 Sobic006G040500 Sobic007G103666--Sobic006G040500 Sobic009G057300 Sobic009G057300 Sobic007G103666--Sobic009G057300 Sobic003G029800--Sobic007G103666 Sobic001G520400 Sobic001G520400 Sobic003G029800--Sobic001G520400 Sobic009G229800 Sobic009G229800 Sobic003G029800--Sobic009G229800 Sobic004G060900 Sobic004G060900 Sobic003G029800--Sobic004G060900 Sobic004G087500 Sobic004G087500 Sobic003G029800--Sobic004G087500 Sobic005G024700 Sobic005G024700 Sobic003G029800--Sobic005G024700 Sobic003G029800--Sobic009G057300 Sobic003G428400 Sobic003G428400 Sobic003G029800--Sobic003G428400 Sobic004G188800 Sobic004G188800 Sobic003G029800--Sobic004G188800 Sobic001G301700--Sobic001G438600 Sobic001G301700--Sobic001G207400 Sobic001G301700--Sobic001G015500 Sobic002G266000 Sobic002G266000 Sobic001G301700--Sobic002G266000 Sobic008G093000 Sobic008G093000 Sobic001G301700--Sobic008G093000 Sobic002G270500 Sobic002G270500 Sobic001G301700--Sobic002G270500 Sobic001G301700--Sobic002G430000 Sobic002G111000 Sobic002G111000 Sobic001G301700--Sobic002G111000 Sobic010G205200 Sobic010G205200 Sobic001G301700--Sobic010G205200 Sobic001G007100 Sobic001G007100 Sobic001G375600--Sobic001G007100 Sobic010G072800 Sobic010G072800 Sobic001G375600--Sobic010G072800 Sobic009G165400 Sobic009G165400 Sobic001G375600--Sobic009G165400 Sobic001G273700 Sobic001G273700 Sobic001G375600--Sobic001G273700 Sobic007G088100 Sobic007G088100 Sobic001G375600--Sobic007G088100 Sobic003G089000 Sobic003G089000 Sobic001G375600--Sobic003G089000 Sobic004G269200 Sobic004G269200 Sobic001G375600--Sobic004G269200 Sobic003G259100 Sobic003G259100 Sobic001G375600--Sobic003G259100 Sobic006G204900 Sobic006G204900 Sobic001G375600--Sobic006G204900 Sobic001G438600--Sobic001G301700 Sobic004G355000 Sobic004G355000 Sobic001G438600--Sobic004G355000 Sobic001G325200 Sobic001G325200 Sobic001G438600--Sobic001G325200 Sobic001G438600--Sobic001G207400 Sobic001G438600--Sobic003G428400 Sobic007G068100 Sobic007G068100 Sobic001G438600--Sobic007G068100 Sobic001G438600--Sobic001G015500 Sobic001G474500 Sobic001G474500 Sobic001G438600--Sobic001G474500 Sobic007G186200 Sobic007G186200 Sobic001G438600--Sobic007G186200 Sobic001G207400--Sobic004G355000 Sobic001G207400--Sobic002G430000 Sobic001G207400--Sobic002G270500 Sobic001G207400--Sobic006G204900 Sobic005G157000 Sobic005G157000 Sobic001G207400--Sobic005G157000 Sobic010G139600 Sobic010G139600 Sobic001G207400--Sobic010G139600 Sobic001G207400--Sobic002G111000 Sobic003G322700 Sobic003G322700 Sobic001G207400--Sobic003G322700 Sobic001G050200 Sobic001G050200 Sobic001G207400--Sobic001G050200 Sobic002G430000--Sobic001G207400 Sobic001G117200 Sobic001G117200 Sobic002G430000--Sobic001G117200 Sobic002G430000--Sobic004G355000 Sobic008G098900 Sobic008G098900 Sobic002G430000--Sobic008G098900 Sobic001G016700 Sobic001G016700 Sobic002G430000--Sobic001G016700 Sobic004G113400 Sobic004G113400 Sobic002G430000--Sobic004G113400 Sobic002G430000--Sobic010G139600 Sobic008G092600 Sobic008G092600 Sobic002G430000--Sobic008G092600 Sobic003G110000 Sobic003G110000 Sobic002G430000--Sobic003G110000 Sobic001G069900 Sobic001G069900 Sobic001G015500--Sobic001G069900 Sobic001G015500--Sobic001G325200 Sobic006G091700 Sobic006G091700 Sobic001G015500--Sobic006G091700 Sobic003G087200 Sobic003G087200 Sobic001G015500--Sobic003G087200 Sobic004G101900 Sobic004G101900 Sobic001G015500--Sobic004G101900 Sobic005G178100 Sobic005G178100 Sobic001G015500--Sobic005G178100 Sobic004G124200 Sobic004G124200 Sobic001G015500--Sobic004G124200 Sobic001G150600 Sobic001G150600 Sobic001G015500--Sobic001G150600 Sobic001G015500--Sobic007G186200 Sobic003G186000 Sobic003G186000 Sobic006G040500--Sobic003G186000 Sobic005G001000 Sobic005G001000 Sobic006G040500--Sobic005G001000 Sobic007G062800 Sobic007G062800 Sobic006G040500--Sobic007G062800 Sobic005G112300 Sobic005G112300 Sobic006G040500--Sobic005G112300 Sobic010G010700 Sobic010G010700 Sobic006G040500--Sobic010G010700 Sobic002G008900 Sobic002G008900 Sobic006G040500--Sobic002G008900 Sobic009G256400 Sobic009G256400 Sobic006G040500--Sobic009G256400 Sobic010G123600 Sobic010G123600 Sobic006G040500--Sobic010G123600 Sobic004G276400 Sobic004G276400 Sobic006G040500--Sobic004G276400 Sobic003G061800 Sobic003G061800 Sobic009G057300--Sobic003G061800 Sobic009G057300--Sobic001G474500 Sobic009G057300--Sobic007G068100 Sobic009G057300--Sobic001G325200 Sobic003G388251 Sobic003G388251 Sobic009G057300--Sobic003G388251 Sobic003G329400 Sobic003G329400 Sobic009G057300--Sobic003G329400 Sobic003G354400 Sobic003G354400 Sobic009G057300--Sobic003G354400 Sobic001G334600 Sobic001G334600 Sobic009G057300--Sobic001G334600 Sobic001G322700 Sobic001G322700 Sobic009G057300--Sobic001G322700
Octagon: transcription factors


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