Gene annotation
Transcriptome id Sobic.003G247300.2,Sobic.003G247300.1
Synonym Sb03g030370
Functional annotation protein of unknown function DUF1296 domain containing protein, expressed
UniProt A0A1B6Q562 , A0A1B6Q561
Pfam PF06972
Panther DB PTHR12758 PTHR12758:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G29370 : Kinase-related protein of unknown function (DUF1296)
RAP-DB (Rice) LOC_Os01g47430.2 : protein of unknown function DUF1296 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a036628 , Zm00025a013056 , Zm00025a028145 , Zm00025a044596 , Zm00025a010099 , Zm00025a038737
Brachypodium KQK09064 , KQK09065 , KQK09066 , KQK09067 , KQK04832
Barley HORVU3Hr1G060080.14 , HORVU3Hr1G060080.13 , HORVU3Hr1G060080.12 , HORVU3Hr1G060080.11 , HORVU3Hr1G060080.9 , HORVU3Hr1G060080.8 , HORVU3Hr1G060080.7 , HORVU3Hr1G060080.6 , HORVU3Hr1G060080.4 , HORVU3Hr1G060080.3 , HORVU3Hr1G060080.2 , HORVU3Hr1G060080.1 , HORVU3Hr1G060080.5 , HORVU3Hr1G060080.10
Wheat TraesCS3B02G269500 , TraesCS3B02G269500
Populus -


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cDNA sequences
Sobic.003G247300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G050200 expressed protein -
2 Sobic.003G313500 MATH domain containing protein, expressed -
3 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
4 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
5 Sobic.005G028600 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
7 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26
8 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
9 Sobic.009G191000 MATH domain containing protein, expressed -
10 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
11 Sobic.004G355000 SAC9, putative, expressed -
12 Sobic.003G422500 expressed protein -
13 Sobic.007G075400 expressed protein -
14 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
15 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
16 Sobic.004G329400 formin, putative, expressed -
17 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
18 Sobic.001G058700 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
19 Sobic.001G117200 AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
20 Sobic.008G087866 - -


Gene co-expression network
sample Sobic003G247300 Sobic003G247300 Sobic001G050200 Sobic001G050200 Sobic003G247300--Sobic001G050200 Sobic003G313500 Sobic003G313500 Sobic003G247300--Sobic003G313500 Sobic010G139600 Sobic010G139600 Sobic003G247300--Sobic010G139600 Sobic005G001000 Sobic005G001000 Sobic003G247300--Sobic005G001000 Sobic005G028600 Sobic005G028600 Sobic003G247300--Sobic005G028600 Sobic002G008900 Sobic002G008900 Sobic003G247300--Sobic002G008900 Sobic003G205200 Sobic003G205200 Sobic003G247300--Sobic003G205200 Sobic004G269200 Sobic004G269200 Sobic003G247300--Sobic004G269200 Sobic009G191000 Sobic009G191000 Sobic003G247300--Sobic009G191000 Sobic002G419800 Sobic002G419800 Sobic001G050200--Sobic002G419800 Sobic003G422500 Sobic003G422500 Sobic001G050200--Sobic003G422500 Sobic009G027300 Sobic009G027300 Sobic001G050200--Sobic009G027300 Sobic001G050200--Sobic003G247300 Sobic001G050200--Sobic009G191000 Sobic007G075400 Sobic007G075400 Sobic001G050200--Sobic007G075400 Sobic001G050200--Sobic004G269200 Sobic004G331100 Sobic004G331100 Sobic001G050200--Sobic004G331100 Sobic003G101400 Sobic003G101400 Sobic001G050200--Sobic003G101400 Sobic003G313500--Sobic009G191000 Sobic003G313500--Sobic003G422500 Sobic002G411600 Sobic002G411600 Sobic003G313500--Sobic002G411600 Sobic001G540400 Sobic001G540400 Sobic003G313500--Sobic001G540400 Sobic004G034900 Sobic004G034900 Sobic003G313500--Sobic004G034900 Sobic001G289600 Sobic001G289600 Sobic003G313500--Sobic001G289600 Sobic009G053900 Sobic009G053900 Sobic003G313500--Sobic009G053900 Sobic003G313500--Sobic002G008900 Sobic001G365900 Sobic001G365900 Sobic003G313500--Sobic001G365900 Sobic010G139600--Sobic007G075400 Sobic002G146300 Sobic002G146300 Sobic010G139600--Sobic002G146300 Sobic010G139600--Sobic003G205200 Sobic008G098900 Sobic008G098900 Sobic010G139600--Sobic008G098900 Sobic010G139600--Sobic003G313500 Sobic010G139600--Sobic005G001000 Sobic001G194200 Sobic001G194200 Sobic010G139600--Sobic001G194200 Sobic010G139600--Sobic003G422500 Sobic001G370900 Sobic001G370900 Sobic010G139600--Sobic001G370900 Sobic005G001000--Sobic001G194200 Sobic005G001000--Sobic002G008900 Sobic005G001000--Sobic001G370900 Sobic005G001000--Sobic003G205200 Sobic004G291900 Sobic004G291900 Sobic005G001000--Sobic004G291900 Sobic003G186000 Sobic003G186000 Sobic005G001000--Sobic003G186000 Sobic008G001200 Sobic008G001200 Sobic005G001000--Sobic008G001200 Sobic005G001000--Sobic003G422500 Sobic009G256400 Sobic009G256400 Sobic005G001000--Sobic009G256400 Sobic001G058700 Sobic001G058700 Sobic005G028600--Sobic001G058700 Sobic005G028600--Sobic003G247300 Sobic002G397500 Sobic002G397500 Sobic005G028600--Sobic002G397500 Sobic001G299700 Sobic001G299700 Sobic005G028600--Sobic001G299700 Sobic003G408600 Sobic003G408600 Sobic005G028600--Sobic003G408600 Sobic005G028600--Sobic005G001000 Sobic001G280900 Sobic001G280900 Sobic005G028600--Sobic001G280900 Sobic007G062800 Sobic007G062800 Sobic005G028600--Sobic007G062800 Sobic005G008800 Sobic005G008800 Sobic005G028600--Sobic005G008800 Sobic002G008900--Sobic009G191000 Sobic002G008900--Sobic002G411600 Sobic002G008900--Sobic007G062800 Sobic002G008900--Sobic003G422500 Sobic002G008900--Sobic005G001000 Sobic010G010700 Sobic010G010700 Sobic002G008900--Sobic010G010700 Sobic002G008900--Sobic004G034900 Sobic010G206900 Sobic010G206900 Sobic002G008900--Sobic010G206900 Sobic002G008900--Sobic009G053900 Sobic003G205200--Sobic002G146300 Sobic003G205200--Sobic005G001000 Sobic003G205200--Sobic008G001200 Sobic003G205200--Sobic001G370900 Sobic003G205200--Sobic003G186000 Sobic003G205200--Sobic010G139600 Sobic004G276400 Sobic004G276400 Sobic003G205200--Sobic004G276400 Sobic003G205200--Sobic001G194200 Sobic003G205200--Sobic008G098900 Sobic004G269200--Sobic009G027300 Sobic004G269200--Sobic001G050200 Sobic001G281100 Sobic001G281100 Sobic004G269200--Sobic001G281100 Sobic004G329400 Sobic004G329400 Sobic004G269200--Sobic004G329400 Sobic004G269200--Sobic004G331100 Sobic004G269200--Sobic003G101400 Sobic004G004300 Sobic004G004300 Sobic004G269200--Sobic004G004300 Sobic005G157000 Sobic005G157000 Sobic004G269200--Sobic005G157000 Sobic001G534800 Sobic001G534800 Sobic004G269200--Sobic001G534800 Sobic009G191000--Sobic002G008900 Sobic009G191000--Sobic002G411600 Sobic009G191000--Sobic003G422500 Sobic009G191000--Sobic009G053900 Sobic009G191000--Sobic001G289600 Sobic009G191000--Sobic003G313500 Sobic010G247800 Sobic010G247800 Sobic009G191000--Sobic010G247800 Sobic009G191000--Sobic004G034900 Sobic009G191000--Sobic001G365900
Octagon: transcription factors


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