Gene annotation
Transcriptome id Sobic.001G083000.1
Synonym WRKY3, Sb01g007480
Functional annotation WRKY4, expressed
UniProt C5X066
Pfam PF03106
Panther DB PTHR31221 PTHR31221:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G13960 : WRKY DNA-binding protein 4
RAP-DB (Rice) LOC_Os04g39570.1 : WRKY35, expressed
MaizeGDB (Corn) Zm00025a037544 , Zm00025a043480 , Zm00025a043967
Brachypodium KQK13089 , PNT61277 , KQJ83108
Barley HORVU1Hr1G070250.3 , HORVU1Hr1G070250.2 , HORVU1Hr1G070250.5 , HORVU1Hr1G070250.8 , HORVU5Hr1G096800.4 , HORVU5Hr1G096800.5 , HORVU5Hr1G096800.6 , HORVU5Hr1G096800.1 , HORVU5Hr1G096800.3 , HORVU1Hr1G070250.1 , HORVU1Hr1G070250.4 , HORVU1Hr1G070250.7 , HORVU1Hr1G070250.6 , HORVU1Hr1G070250.9
Wheat TraesCS5B02G401800 , TraesCS4A02G162500 , TraesCS1B02G308200 , TraesCS5D02G406500 , TraesCS5A02G396800 , TraesCS1D02G292700 , TraesCS4B02G165900 , TraesCS4B02G165900 , TraesCS4D02G151700 , TraesCS1A02G298600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G036450 - -
2 Sobic.006G122000 cytochrome P450, putative, expressed -
3 Sobic.001G222150 - -
4 Sobic.010G058600 expressed protein -
5 Sobic.007G217200 (28.4% identity with SbCCoAOMT/37.4% similarity) unlikely to have any significant CCoAOMT activity.(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed -
6 Sobic.001G150901 - -
7 Sobic.003G159101 - -
8 Sobic.004G303433 - K02950: RP-S12, MRPS12, small subunit ribosomal protein S12
9 Sobic.007G011100 - -
10 Sobic.001G039750 - -
11 Sobic.003G069400 - -
12 Sobic.004G013900 vacuolar ATP synthase 98 kDa subunit, putative, expressed -
13 Sobic.005G146900 membrane associated DUF588 domain containing protein, putative, expressed -
14 Sobic.002G159750 - -
15 Sobic.003G286450 - -
16 Sobic.007G054200 harpin-induced protein 1 domain containing protein, expressed -
17 Sobic.002G288700 - K02711: photosystem II PsbJ protein
18 Sobic.010G214950 - -
19 Sobic.001G535850 - -
20 Sobic.006G258100 - -


Gene co-expression network
sample Sobic001G083000 Sobic001G083000 Sobic005G036450 Sobic005G036450 Sobic001G083000--Sobic005G036450 Sobic006G122000 Sobic006G122000 Sobic001G083000--Sobic006G122000 Sobic001G222150 Sobic001G222150 Sobic001G083000--Sobic001G222150 Sobic010G058600 Sobic010G058600 Sobic001G083000--Sobic010G058600 Sobic007G217200 Sobic007G217200 Sobic001G083000--Sobic007G217200 Sobic001G150901 Sobic001G150901 Sobic001G083000--Sobic001G150901 Sobic003G159101 Sobic003G159101 Sobic001G083000--Sobic003G159101 Sobic004G303433 Sobic004G303433 Sobic001G083000--Sobic004G303433 Sobic007G011100 Sobic007G011100 Sobic001G083000--Sobic007G011100 Sobic005G036450--Sobic003G159101 Sobic005G036450--Sobic004G303433 Sobic003G173116 Sobic003G173116 Sobic005G036450--Sobic003G173116 Sobic005G139900 Sobic005G139900 Sobic005G036450--Sobic005G139900 Sobic003G169200 Sobic003G169200 Sobic005G036450--Sobic003G169200 Sobic001G535850 Sobic001G535850 Sobic005G036450--Sobic001G535850 Sobic001G394532 Sobic001G394532 Sobic005G036450--Sobic001G394532 Sobic009G174150 Sobic009G174150 Sobic005G036450--Sobic009G174150 Sobic001G230050 Sobic001G230050 Sobic005G036450--Sobic001G230050 Sobic002G387450 Sobic002G387450 Sobic006G122000--Sobic002G387450 Sobic006G122000--Sobic001G222150 Sobic002G218400 Sobic002G218400 Sobic006G122000--Sobic002G218400 Sobic006G122000--Sobic007G217200 Sobic006G122000--Sobic001G083000 Sobic006G122000--Sobic007G011100 Sobic003G238750 Sobic003G238750 Sobic006G122000--Sobic003G238750 Sobic003G344300 Sobic003G344300 Sobic006G122000--Sobic003G344300 Sobic010G175550 Sobic010G175550 Sobic006G122000--Sobic010G175550 Sobic001G222150--Sobic007G011100 Sobic002G220400 Sobic002G220400 Sobic001G222150--Sobic002G220400 Sobic001G222150--Sobic010G058600 Sobic001G154000 Sobic001G154000 Sobic001G222150--Sobic001G154000 Sobic004G019550 Sobic004G019550 Sobic001G222150--Sobic004G019550 Sobic001G222150--Sobic006G122000 Sobic001G222150--Sobic003G344300 Sobic001G222150--Sobic001G150901 Sobic003G286450 Sobic003G286450 Sobic001G222150--Sobic003G286450 Sobic010G058600--Sobic001G222150 Sobic001G181400 Sobic001G181400 Sobic010G058600--Sobic001G181400 Sobic010G058600--Sobic005G036450 Sobic001G205950 Sobic001G205950 Sobic010G058600--Sobic001G205950 Sobic008G156800 Sobic008G156800 Sobic010G058600--Sobic008G156800 Sobic010G058600--Sobic003G286450 Sobic001G400601 Sobic001G400601 Sobic010G058600--Sobic001G400601 Sobic009G058900 Sobic009G058900 Sobic010G058600--Sobic009G058900 Sobic010G058600--Sobic001G083000 Sobic001G039750 Sobic001G039750 Sobic007G217200--Sobic001G039750 Sobic007G217200--Sobic010G175550 Sobic002G159750 Sobic002G159750 Sobic007G217200--Sobic002G159750 Sobic007G217200--Sobic003G238750 Sobic001G476800 Sobic001G476800 Sobic007G217200--Sobic001G476800 Sobic007G217200--Sobic006G122000 Sobic010G196466 Sobic010G196466 Sobic007G217200--Sobic010G196466 Sobic003G069400 Sobic003G069400 Sobic007G217200--Sobic003G069400 Sobic009G210250 Sobic009G210250 Sobic007G217200--Sobic009G210250 Sobic001G150901--Sobic007G011100 Sobic010G214950 Sobic010G214950 Sobic001G150901--Sobic010G214950 Sobic002G288700 Sobic002G288700 Sobic001G150901--Sobic002G288700 Sobic005G146900 Sobic005G146900 Sobic001G150901--Sobic005G146900 Sobic001G150901--Sobic001G222150 Sobic001G150901--Sobic003G159101 Sobic001G150901--Sobic005G036450 Sobic006G123800 Sobic006G123800 Sobic001G150901--Sobic006G123800 Sobic002G423901 Sobic002G423901 Sobic001G150901--Sobic002G423901 Sobic003G159101--Sobic003G173116 Sobic003G159101--Sobic005G036450 Sobic003G159101--Sobic003G169200 Sobic003G159101--Sobic005G139900 Sobic003G159101--Sobic004G303433 Sobic003G159101--Sobic001G230050 Sobic003G159101--Sobic009G174150 Sobic003G159101--Sobic001G535850 Sobic003G053100 Sobic003G053100 Sobic003G159101--Sobic003G053100 Sobic004G303433--Sobic005G139900 Sobic004G303433--Sobic001G535850 Sobic004G303433--Sobic003G159101 Sobic004G303433--Sobic001G394532 Sobic004G303433--Sobic005G036450 Sobic005G184900 Sobic005G184900 Sobic004G303433--Sobic005G184900 Sobic004G303433--Sobic003G286450 Sobic004G303433--Sobic003G169200 Sobic004G303433--Sobic003G173116 Sobic007G011100--Sobic001G150901 Sobic007G011100--Sobic001G222150 Sobic007G011100--Sobic002G220400 Sobic004G073300 Sobic004G073300 Sobic007G011100--Sobic004G073300 Sobic007G011100--Sobic009G058900 Sobic007G011100--Sobic010G214950 Sobic007G011100--Sobic001G039750 Sobic001G524150 Sobic001G524150 Sobic007G011100--Sobic001G524150 Sobic010G186900 Sobic010G186900 Sobic007G011100--Sobic010G186900
Octagon: transcription factors


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