Gene annotation
Transcriptome id Sobic.005G146900.1
Synonym Sb05g021270
Functional annotation membrane associated DUF588 domain containing protein, putative, expressed
UniProt C5Y484
Pfam PF04535
Panther DB PTHR33573 PTHR33573:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39518 : Uncharacterised protein family (UPF0497)
RAP-DB (Rice) LOC_Os11g34730.1 : membrane associated DUF588 domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G123800 - -
2 Sobic.002G288700 - K02711: photosystem II PsbJ protein
3 Sobic.001G150901 - -
4 Sobic.007G223250 - -
5 Sobic.001G059150 - -
6 Sobic.003G354166 - -
7 Sobic.001G266000 OsClp10 - Putative Clp protease homologue, expressed -
8 Sobic.010G214950 - -
9 Sobic.002G014900 OsFBD13 - F-box and FBD domain containing protein, expressed -
10 Sobic.004G116900 nuclear ribonuclease Z, putative, expressed K00784: ribonuclease Z
11 Sobic.001G195400 - -
12 Sobic.003G173266 - K02956: RP-S15, MRPS15, small subunit ribosomal protein S15
13 Sobic.003G200400 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
14 Sobic.004G198701 - -
15 Sobic.002G150032 - -
16 Sobic.005G036450 - -
17 Sobic.003G172850 - K03043: DNA-directed RNA polymerase subunit beta
18 Sobic.003G159101 - -
19 Sobic.003G172900 NADPH-dependent oxidoreductase, putative, expressed K05581: NAD(P)H-quinone oxidoreductase subunit J
20 Sobic.003G168800 photosystem II reaction center protein H, putative, expressed K02709: photosystem II PsbH protein


Gene co-expression network
sample Sobic005G146900 Sobic005G146900 Sobic006G123800 Sobic006G123800 Sobic005G146900--Sobic006G123800 Sobic002G288700 Sobic002G288700 Sobic005G146900--Sobic002G288700 Sobic001G150901 Sobic001G150901 Sobic005G146900--Sobic001G150901 Sobic007G223250 Sobic007G223250 Sobic005G146900--Sobic007G223250 Sobic001G059150 Sobic001G059150 Sobic005G146900--Sobic001G059150 Sobic003G354166 Sobic003G354166 Sobic005G146900--Sobic003G354166 Sobic001G266000 Sobic001G266000 Sobic005G146900--Sobic001G266000 Sobic010G214950 Sobic010G214950 Sobic005G146900--Sobic010G214950 Sobic002G014900 Sobic002G014900 Sobic005G146900--Sobic002G014900 Sobic006G123800--Sobic001G266000 Sobic003G173266 Sobic003G173266 Sobic006G123800--Sobic003G173266 Sobic006G123800--Sobic002G288700 Sobic003G172850 Sobic003G172850 Sobic006G123800--Sobic003G172850 Sobic003G172900 Sobic003G172900 Sobic006G123800--Sobic003G172900 Sobic006G123800--Sobic002G014900 Sobic002G150032 Sobic002G150032 Sobic006G123800--Sobic002G150032 Sobic004G251400 Sobic004G251400 Sobic006G123800--Sobic004G251400 Sobic006G123800--Sobic007G223250 Sobic002G288700--Sobic007G223250 Sobic002G288700--Sobic006G123800 Sobic004G087000 Sobic004G087000 Sobic002G288700--Sobic004G087000 Sobic002G288700--Sobic003G173266 Sobic002G288700--Sobic001G266000 Sobic002G288700--Sobic002G014900 Sobic007G109200 Sobic007G109200 Sobic002G288700--Sobic007G109200 Sobic002G288700--Sobic003G172900 Sobic002G288700--Sobic004G251400 Sobic007G011100 Sobic007G011100 Sobic001G150901--Sobic007G011100 Sobic001G150901--Sobic010G214950 Sobic001G150901--Sobic002G288700 Sobic001G150901--Sobic005G146900 Sobic001G222150 Sobic001G222150 Sobic001G150901--Sobic001G222150 Sobic003G159101 Sobic003G159101 Sobic001G150901--Sobic003G159101 Sobic005G036450 Sobic005G036450 Sobic001G150901--Sobic005G036450 Sobic001G150901--Sobic006G123800 Sobic002G423901 Sobic002G423901 Sobic001G150901--Sobic002G423901 Sobic007G223250--Sobic002G288700 Sobic007G223250--Sobic002G014900 Sobic007G223250--Sobic004G087000 Sobic007G223250--Sobic006G123800 Sobic007G223250--Sobic001G266000 Sobic007G223250--Sobic002G150032 Sobic007G223250--Sobic003G172900 Sobic007G223250--Sobic004G251400 Sobic007G223250--Sobic007G109200 Sobic001G059150--Sobic010G214950 Sobic001G195400 Sobic001G195400 Sobic001G059150--Sobic001G195400 Sobic001G234733 Sobic001G234733 Sobic001G059150--Sobic001G234733 Sobic001G059150--Sobic001G150901 Sobic001G059150--Sobic005G146900 Sobic001G059150--Sobic007G223250 Sobic004G198701 Sobic004G198701 Sobic001G059150--Sobic004G198701 Sobic001G059150--Sobic002G288700 Sobic003G200400 Sobic003G200400 Sobic001G059150--Sobic003G200400 Sobic001G293900 Sobic001G293900 Sobic003G354166--Sobic001G293900 Sobic007G004750 Sobic007G004750 Sobic003G354166--Sobic007G004750 Sobic003G255850 Sobic003G255850 Sobic003G354166--Sobic003G255850 Sobic003G128575 Sobic003G128575 Sobic003G354166--Sobic003G128575 Sobic003G119750 Sobic003G119750 Sobic003G354166--Sobic003G119750 Sobic006G017266 Sobic006G017266 Sobic003G354166--Sobic006G017266 Sobic005G183450 Sobic005G183450 Sobic003G354166--Sobic005G183450 Sobic010G132200 Sobic010G132200 Sobic003G354166--Sobic010G132200 Sobic006G124850 Sobic006G124850 Sobic003G354166--Sobic006G124850 Sobic001G266000--Sobic002G150032 Sobic001G266000--Sobic003G172900 Sobic002G149966 Sobic002G149966 Sobic001G266000--Sobic002G149966 Sobic001G266000--Sobic003G172850 Sobic001G266000--Sobic003G173266 Sobic001G266000--Sobic002G014900 Sobic002G044500 Sobic002G044500 Sobic001G266000--Sobic002G044500 Sobic002G222000 Sobic002G222000 Sobic001G266000--Sobic002G222000 Sobic001G266000--Sobic006G123800 Sobic010G214950--Sobic001G059150 Sobic010G214950--Sobic001G150901 Sobic010G214950--Sobic007G011100 Sobic010G214950--Sobic001G234733 Sobic010G214950--Sobic005G146900 Sobic004G013900 Sobic004G013900 Sobic010G214950--Sobic004G013900 Sobic010G214950--Sobic002G288700 Sobic010G214950--Sobic007G223250 Sobic010G214950--Sobic003G200400 Sobic002G014900--Sobic002G150032 Sobic002G014900--Sobic001G266000 Sobic002G014900--Sobic002G149966 Sobic002G014900--Sobic003G172900 Sobic002G014900--Sobic003G172850 Sobic002G014900--Sobic002G044500 Sobic002G014900--Sobic006G124850 Sobic002G014900--Sobic004G251400 Sobic003G290050 Sobic003G290050 Sobic002G014900--Sobic003G290050
Octagon: transcription factors


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