Gene annotation
Transcriptome id Sobic.001G148400.1
Synonym CAX7, Sb01g012910
Functional annotation Ca exchanger (PubMedID : 22196357)
sodium/calcium exchanger protein, putative, expressed
UniProt Q8W0Q9
Pfam PF01699
Panther DB PTHR12266 PTHR12266:SF2
NCBI CDD KOG2399; K+-dependent Na+:Ca2+ antiporter
KEGG Orthology K13754; SLC24A6, solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G17860 : calcium exchanger 7
RAP-DB (Rice) LOC_Os03g45370.1 : sodium/calcium exchanger protein, putative, expressed
MaizeGDB (Corn) Zm00025a007553 , Zm00025a017204
Brachypodium KQJ96801 , KQK13901
Barley HORVU4Hr1G002330.2 , HORVU4Hr1G002330.3 , HORVU4Hr1G002330.1 , HORVU4Hr1G002330.4 , HORVU4Hr1G002330.5
Wheat TraesCS4D02G013300
Populus -


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cDNA sequences
Sobic.001G148400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G070300 - -
2 Sobic.001G467700 arginyl-tRNA synthetase, putative, expressed -
3 Sobic.001G520100 MLO domain containing protein, putative, expressed K08472: mlo protein
4 Sobic.005G063900 expressed protein -
5 Sobic.005G115400 - -
6 Sobic.010G179500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
7 Sobic.010G115900 ureide permease, putative, expressed -
8 Sobic.002G253400 FAD dependent oxidoreductase domain containing protein, expressed -
9 Sobic.005G085500 - -
10 Sobic.002G337001 - -
11 Sobic.002G174300 senescence-related tran- scription factor gene(PubMedID : 26317421)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY74, expressed -
12 Sobic.001G450500 STE_MEK_ste7_MAP2K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
13 Sobic.006G123400 expressed protein -
14 Sobic.007G139900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G093500 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
16 Sobic.001G363200 expressed protein -
17 Sobic.001G161100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
18 Sobic.001G315800 shikimate/quinate 5-dehydrogenase, putative, expressed -
19 Sobic.004G160300 expressed protein -
20 Sobic.005G217700 carboxyl-terminal peptidase, putative, expressed -


Gene co-expression network
sample Sobic001G148400 Sobic001G148400 Sobic009G070300 Sobic009G070300 Sobic001G148400--Sobic009G070300 Sobic001G467700 Sobic001G467700 Sobic001G148400--Sobic001G467700 Sobic001G520100 Sobic001G520100 Sobic001G148400--Sobic001G520100 Sobic005G063900 Sobic005G063900 Sobic001G148400--Sobic005G063900 Sobic005G115400 Sobic005G115400 Sobic001G148400--Sobic005G115400 Sobic010G179500 Sobic010G179500 Sobic001G148400--Sobic010G179500 Sobic010G115900 Sobic010G115900 Sobic001G148400--Sobic010G115900 Sobic002G253400 Sobic002G253400 Sobic001G148400--Sobic002G253400 Sobic005G085500 Sobic005G085500 Sobic001G148400--Sobic005G085500 Sobic009G070300--Sobic005G115400 Sobic009G070300--Sobic001G467700 Sobic009G070300--Sobic010G115900 Sobic001G267000 Sobic001G267000 Sobic009G070300--Sobic001G267000 Sobic009G214800 Sobic009G214800 Sobic009G070300--Sobic009G214800 Sobic009G070300--Sobic001G148400 Sobic005G124300 Sobic005G124300 Sobic009G070300--Sobic005G124300 Sobic003G128550 Sobic003G128550 Sobic009G070300--Sobic003G128550 Sobic002G066901 Sobic002G066901 Sobic009G070300--Sobic002G066901 Sobic001G467700--Sobic009G070300 Sobic002G093500 Sobic002G093500 Sobic001G467700--Sobic002G093500 Sobic001G467700--Sobic005G115400 Sobic001G467700--Sobic010G115900 Sobic001G467700--Sobic009G214800 Sobic010G143000 Sobic010G143000 Sobic001G467700--Sobic010G143000 Sobic005G089000 Sobic005G089000 Sobic001G467700--Sobic005G089000 Sobic008G073400 Sobic008G073400 Sobic001G467700--Sobic008G073400 Sobic001G198700 Sobic001G198700 Sobic001G467700--Sobic001G198700 Sobic001G321600 Sobic001G321600 Sobic001G520100--Sobic001G321600 Sobic010G089200 Sobic010G089200 Sobic001G520100--Sobic010G089200 Sobic001G520100--Sobic005G063900 Sobic001G019300 Sobic001G019300 Sobic001G520100--Sobic001G019300 Sobic001G520100--Sobic010G179500 Sobic002G257100 Sobic002G257100 Sobic001G520100--Sobic002G257100 Sobic001G520100--Sobic001G198700 Sobic001G520100--Sobic008G073400 Sobic009G153200 Sobic009G153200 Sobic001G520100--Sobic009G153200 Sobic005G063900--Sobic001G019300 Sobic002G265400 Sobic002G265400 Sobic005G063900--Sobic002G265400 Sobic005G063900--Sobic001G520100 Sobic005G190900 Sobic005G190900 Sobic005G063900--Sobic005G190900 Sobic009G038200 Sobic009G038200 Sobic005G063900--Sobic009G038200 Sobic002G041800 Sobic002G041800 Sobic005G063900--Sobic002G041800 Sobic002G337001 Sobic002G337001 Sobic005G063900--Sobic002G337001 Sobic005G063900--Sobic002G257100 Sobic005G063900--Sobic001G321600 Sobic005G115400--Sobic009G070300 Sobic005G115400--Sobic010G115900 Sobic005G115400--Sobic009G214800 Sobic009G107020 Sobic009G107020 Sobic005G115400--Sobic009G107020 Sobic008G120132 Sobic008G120132 Sobic005G115400--Sobic008G120132 Sobic005G115400--Sobic003G128550 Sobic005G115400--Sobic010G143000 Sobic005G115400--Sobic001G467700 Sobic005G115400--Sobic005G124300 Sobic010G179500--Sobic001G520100 Sobic010G179500--Sobic001G321600 Sobic010G179500--Sobic005G063900 Sobic010G179500--Sobic002G337001 Sobic001G161100 Sobic001G161100 Sobic010G179500--Sobic001G161100 Sobic010G179500--Sobic010G089200 Sobic009G202600 Sobic009G202600 Sobic010G179500--Sobic009G202600 Sobic010G179500--Sobic008G073400 Sobic010G179500--Sobic001G019300 Sobic010G115900--Sobic005G115400 Sobic010G115900--Sobic009G214800 Sobic005G128800 Sobic005G128800 Sobic010G115900--Sobic005G128800 Sobic010G115900--Sobic010G143000 Sobic010G115900--Sobic009G070300 Sobic010G115900--Sobic008G120132 Sobic010G115900--Sobic009G107020 Sobic010G115900--Sobic002G337001 Sobic010G115900--Sobic001G467700 Sobic008G181801 Sobic008G181801 Sobic002G253400--Sobic008G181801 Sobic002G253400--Sobic005G085500 SobicK044407 SobicK044407 Sobic002G253400--SobicK044407 Sobic003G310200 Sobic003G310200 Sobic002G253400--Sobic003G310200 Sobic002G349400 Sobic002G349400 Sobic002G253400--Sobic002G349400 Sobic001G012000 Sobic001G012000 Sobic002G253400--Sobic001G012000 Sobic005G193600 Sobic005G193600 Sobic002G253400--Sobic005G193600 Sobic009G241500 Sobic009G241500 Sobic002G253400--Sobic009G241500 Sobic006G045000 Sobic006G045000 Sobic002G253400--Sobic006G045000 Sobic005G085500--Sobic002G041800 Sobic005G085500--Sobic008G181801 Sobic005G085500--SobicK044407 Sobic004G195800 Sobic004G195800 Sobic005G085500--Sobic004G195800 Sobic002G209100 Sobic002G209100 Sobic005G085500--Sobic002G209100 Sobic005G085500--Sobic006G045000 Sobic005G085500--Sobic001G012000 Sobic002G423600 Sobic002G423600 Sobic005G085500--Sobic002G423600 Sobic004G078600 Sobic004G078600 Sobic005G085500--Sobic004G078600
Octagon: transcription factors


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