Gene annotation
Transcriptome id Sobic.001G195000.1
Synonym Sb01g017150
Functional annotation protein kinase domain containing protein, expressed
UniProt C5WVE7
Pfam PF00069
Panther DB PTHR27003 PTHR27003:SF91
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04730; interleukin-1 receptor-associated kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G33260 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os10g37190.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a017428 , Zm00025a053530 , Zm00025a006315 , Zm00025a008603 , Zm00025a056619
Brachypodium KQK00546 , KQJ83840 , KQK24034 , KQK24035 , KQJ97394
Barley HORVU4Hr1G089200.2 , HORVU4Hr1G089200.1 , HORVU1Hr1G047010.1 , HORVU4Hr1G015710.5 , HORVU4Hr1G015710.6 , HORVU4Hr1G015710.1 , HORVU5Hr1G107330.2 , HORVU5Hr1G107330.1
Wheat TraesCS6B02G284500 , TraesCS5A02G084200 , TraesCS1A02G177000 , TraesCS5B02G089800 , TraesCS1B02G203200 , TraesCS6A02G240100 , TraesCS6D02G222400 , TraesCS1D02G175400 , TraesCS5D02G096200
Populus -


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cDNA sequences
Sobic.001G195000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G424950 - K14508: regulatory protein NPR1
2 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -
3 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
4 Sobic.005G169700 targeting protein for Xklp2, putative, expressed -
5 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
6 Sobic.001G339400 proline-rich protein, putative, expressed -
7 Sobic.010G224900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
8 Sobic.001G352500 expressed protein -
9 Sobic.010G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.001G099100 endoglucanase, putative, expressed K01179: endoglucanase
11 Sobic.001G344500 sucrose synthase(PubMedID : 26616172)@sucrose synthase, putative, expressed K00695: sucrose synthase
12 Sobic.009G032600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
14 Sobic.009G175200 expressed protein -
15 Sobic.004G006700 tetratricopeptide repeat domain containing protein, expressed -
16 Sobic.003G375000 RNA recognition motif containing protein, putative, expressed -
17 Sobic.010G238800 glycosyltransferase family 43 protein, putative, expressed -
18 Sobic.001G468300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
19 Sobic.002G179150 - -
20 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G195000 Sobic001G195000 Sobic003G424950 Sobic003G424950 Sobic001G195000--Sobic003G424950 Sobic003G151300 Sobic003G151300 Sobic001G195000--Sobic003G151300 Sobic001G107200 Sobic001G107200 Sobic001G195000--Sobic001G107200 Sobic005G169700 Sobic005G169700 Sobic001G195000--Sobic005G169700 Sobic009G026200 Sobic009G026200 Sobic001G195000--Sobic009G026200 Sobic001G339400 Sobic001G339400 Sobic001G195000--Sobic001G339400 Sobic010G224900 Sobic010G224900 Sobic001G195000--Sobic010G224900 Sobic001G352500 Sobic001G352500 Sobic001G195000--Sobic001G352500 Sobic010G086800 Sobic010G086800 Sobic001G195000--Sobic010G086800 Sobic004G154600 Sobic004G154600 Sobic003G424950--Sobic004G154600 Sobic001G389300 Sobic001G389300 Sobic003G424950--Sobic001G389300 Sobic008G086200 Sobic008G086200 Sobic003G424950--Sobic008G086200 Sobic002G072700 Sobic002G072700 Sobic003G424950--Sobic002G072700 Sobic004G259101 Sobic004G259101 Sobic003G424950--Sobic004G259101 Sobic009G248900 Sobic009G248900 Sobic003G424950--Sobic009G248900 Sobic003G424950--Sobic001G195000 Sobic001G258100 Sobic001G258100 Sobic003G424950--Sobic001G258100 Sobic008G158000 Sobic008G158000 Sobic003G424950--Sobic008G158000 Sobic003G151300--Sobic009G026200 Sobic008G008400 Sobic008G008400 Sobic003G151300--Sobic008G008400 Sobic008G174800 Sobic008G174800 Sobic003G151300--Sobic008G174800 Sobic003G151300--Sobic010G224900 Sobic009G162500 Sobic009G162500 Sobic003G151300--Sobic009G162500 Sobic003G151300--Sobic001G107200 Sobic008G021900 Sobic008G021900 Sobic003G151300--Sobic008G021900 Sobic004G203900 Sobic004G203900 Sobic003G151300--Sobic004G203900 Sobic004G134100 Sobic004G134100 Sobic003G151300--Sobic004G134100 Sobic001G528600 Sobic001G528600 Sobic001G107200--Sobic001G528600 Sobic006G191700 Sobic006G191700 Sobic001G107200--Sobic006G191700 Sobic001G107100 Sobic001G107100 Sobic001G107200--Sobic001G107100 Sobic002G350400 Sobic002G350400 Sobic001G107200--Sobic002G350400 Sobic005G047100 Sobic005G047100 Sobic001G107200--Sobic005G047100 Sobic007G094400 Sobic007G094400 Sobic001G107200--Sobic007G094400 Sobic003G250700 Sobic003G250700 Sobic001G107200--Sobic003G250700 Sobic003G011100 Sobic003G011100 Sobic001G107200--Sobic003G011100 Sobic006G278100 Sobic006G278100 Sobic001G107200--Sobic006G278100 Sobic001G535400 Sobic001G535400 Sobic005G169700--Sobic001G535400 Sobic001G468300 Sobic001G468300 Sobic005G169700--Sobic001G468300 Sobic003G183800 Sobic003G183800 Sobic005G169700--Sobic003G183800 Sobic005G146300 Sobic005G146300 Sobic005G169700--Sobic005G146300 Sobic007G033300 Sobic007G033300 Sobic005G169700--Sobic007G033300 Sobic007G027200 Sobic007G027200 Sobic005G169700--Sobic007G027200 Sobic005G169700--Sobic001G339400 Sobic010G199700 Sobic010G199700 Sobic005G169700--Sobic010G199700 Sobic009G153800 Sobic009G153800 Sobic005G169700--Sobic009G153800 Sobic009G026200--Sobic003G151300 Sobic009G026200--Sobic004G134100 Sobic001G069800 Sobic001G069800 Sobic009G026200--Sobic001G069800 Sobic009G026200--Sobic008G174800 Sobic009G026200--Sobic010G224900 Sobic009G026200--Sobic008G008400 Sobic004G051300 Sobic004G051300 Sobic009G026200--Sobic004G051300 Sobic004G006700 Sobic004G006700 Sobic009G026200--Sobic004G006700 Sobic001G230900 Sobic001G230900 Sobic009G026200--Sobic001G230900 Sobic001G339400--Sobic003G151300 Sobic009G102800 Sobic009G102800 Sobic001G339400--Sobic009G102800 Sobic001G339400--Sobic001G535400 Sobic004G205500 Sobic004G205500 Sobic001G339400--Sobic004G205500 Sobic001G339400--Sobic005G169700 Sobic003G174900 Sobic003G174900 Sobic001G339400--Sobic003G174900 Sobic003G420800 Sobic003G420800 Sobic001G339400--Sobic003G420800 Sobic009G175200 Sobic009G175200 Sobic001G339400--Sobic009G175200 Sobic001G339400--Sobic001G195000 Sobic010G224900--Sobic003G151300 Sobic010G224900--Sobic001G107200 Sobic010G224900--Sobic004G006700 Sobic010G224900--Sobic009G026200 Sobic005G211200 Sobic005G211200 Sobic010G224900--Sobic005G211200 Sobic002G348000 Sobic002G348000 Sobic010G224900--Sobic002G348000 Sobic001G215500 Sobic001G215500 Sobic010G224900--Sobic001G215500 Sobic003G128000 Sobic003G128000 Sobic010G224900--Sobic003G128000 Sobic010G224900--Sobic001G069800 Sobic001G475500 Sobic001G475500 Sobic001G352500--Sobic001G475500 Sobic008G103700 Sobic008G103700 Sobic001G352500--Sobic008G103700 Sobic006G054700 Sobic006G054700 Sobic001G352500--Sobic006G054700 Sobic002G128800 Sobic002G128800 Sobic001G352500--Sobic002G128800 Sobic003G379600 Sobic003G379600 Sobic001G352500--Sobic003G379600 Sobic010G238800 Sobic010G238800 Sobic001G352500--Sobic010G238800 Sobic006G156000 Sobic006G156000 Sobic001G352500--Sobic006G156000 Sobic001G459900 Sobic001G459900 Sobic001G352500--Sobic001G459900 Sobic009G189200 Sobic009G189200 Sobic001G352500--Sobic009G189200 Sobic003G062000 Sobic003G062000 Sobic010G086800--Sobic003G062000 Sobic004G168700 Sobic004G168700 Sobic010G086800--Sobic004G168700 Sobic009G032600 Sobic009G032600 Sobic010G086800--Sobic009G032600 Sobic006G036400 Sobic006G036400 Sobic010G086800--Sobic006G036400 Sobic009G226900 Sobic009G226900 Sobic010G086800--Sobic009G226900 Sobic003G427900 Sobic003G427900 Sobic010G086800--Sobic003G427900 Sobic002G072200 Sobic002G072200 Sobic010G086800--Sobic002G072200 Sobic010G086800--Sobic001G107100 Sobic010G086800--Sobic009G162500
Octagon: transcription factors


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