Gene annotation
Transcriptome id Sobic.010G224900.1
Synonym Sb10g027010, TUB2
Functional annotation tubulin/FtsZ domain containing protein, putative, expressed
UniProt C5Z7S0
Pfam PF03953 PF00091
Panther DB PTHR11588 PTHR11588:SF117
NCBI CDD -
KEGG Orthology K07375; tubulin beta
Gene Ontology GO:0003924; GTPase activity GO:0007017microtubule-based process GO:0005874microtubule


Orthologs (automatic annotation)
TAIR AT5G62690 : tubulin beta chain 2
RAP-DB (Rice) LOC_Os06g46000.1 : tubulin/FtsZ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a000132 , Zm00025a037439 , Zm00025a039825 , Zm00025a008433 , Zm00025a008427 , Zm00025a001989 , Zm00025a041941 , Zm00025a016660 , Zm00025a035181 , Zm00025a008163 , Zm00025a024200 , Zm00025a036766 , Zm00025a007533 , Zm00025a017188 , Zm00025a014491 , Zm00025a018766 , Zm00025a019054 , Zm00025a051791 , Zm00025a040093
Brachypodium KQJ93503 , KQK12908 , KQK17085 , KQK13880 , KQK24113 , KQK06257 , KQK03976 , KQK05638
Barley HORVU3Hr1G078940.2 , HORVU3Hr1G078940.1 , HORVU3Hr1G078940.7 , HORVU3Hr1G078940.6 , HORVU3Hr1G078940.4 , HORVU1Hr1G068170.1 , HORVU1Hr1G068170.3 , HORVU1Hr1G068170.2 , HORVU0Hr1G026030.4 , HORVU0Hr1G026030.3 , HORVU0Hr1G026030.2 , HORVU7Hr1G059990.1 , HORVU1Hr1G064870.4 , HORVU1Hr1G064870.5 , HORVU1Hr1G064870.6 , HORVU1Hr1G064870.7 , HORVU1Hr1G064870.1 , HORVU1Hr1G064870.2 , HORVU1Hr1G064870.3 , HORVU1Hr1G064870.9 , HORVU4Hr1G087740.1 , HORVU4Hr1G087740.3 , HORVU4Hr1G087740.4 , HORVU4Hr1G002530.1 , HORVU4Hr1G002530.2 , HORVU4Hr1G002530.3 , HORVU4Hr1G002530.4 , HORVU4Hr1G002530.5 , HORVU4Hr1G002530.6 , HORVU4Hr1G087740.5 , HORVU4Hr1G087740.2 , HORVU5Hr1G100900.1 , HORVU5Hr1G100900.2 , HORVU5Hr1G100900.5 , HORVU5Hr1G100900.4 , HORVU5Hr1G100900.6 , HORVU7Hr1G107100.4 , HORVU7Hr1G107100.5 , HORVU7Hr1G107100.2 , HORVU7Hr1G107100.3 , HORVU7Hr1G107100.1 , HORVU4Hr1G002530.7 , HORVU6Hr1G027620.5 , HORVU6Hr1G027620.4 , HORVU6Hr1G027620.3 , HORVU6Hr1G027620.2 , HORVU6Hr1G027620.1
Wheat TraesCS4D02G015400 , TraesCS7A02G466600 , TraesCS4B02G017100 , TraesCS6D02G130500 , TraesCS6D02G130500 , TraesCS4A02G296600 , TraesCS1B02G320800 , TraesCS1A02G309700 , TraesCS5A02G416400 , TraesCS5A02G416400 , TraesCS1D02G258800 , TraesCS1B02G269400 , TraesCS5D02G424100 , TraesCS6B02G169300 , TraesCS6B02G169300 , TraesCS4B02G366500 , TraesCS3A02G333300 , TraesCS1A02G258800 , TraesCS5B02G418700 , TraesCS5A02G534300 , TraesCS3D02G326900 , TraesCSU02G137900 , TraesCS1D02G309200 , TraesCS7D02G454200
Populus PNT38458 , PNT13773 , PNT29533 , PNT29532 , PNT53825 , PNT29534 , PNT56931 , PNT56932


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cDNA sequences
Sobic.010G224900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -
2 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
3 Sobic.004G006700 tetratricopeptide repeat domain containing protein, expressed -
4 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
5 Sobic.005G211200 seed maturation protein PM27, putative, expressed -
6 Sobic.002G348000 STE_PAK_Ste20_Slob_Wnk.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
7 Sobic.001G215500 expressed protein -
8 Sobic.003G128000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
9 Sobic.001G069800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
10 Sobic.007G094400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fiber protein Fb34, putative, expressed -
11 Sobic.002G380000 TRM112, putative, expressed K15448: TRM112, multifunctional methyltransferase subunit TRM112
12 Sobic.001G350501 - K11253: histone H3
13 Sobic.001G041200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09567: PPIH, peptidyl-prolyl isomerase H (cyclophilin H)
14 Sobic.009G123500 TKL_IRAK_CR4L.5 - The CR4L subfamily has homology with Crinkly4, expressed -
15 Sobic.001G040300 expressed protein -
16 Sobic.008G136000 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
17 Sobic.009G165500 Lung seven transmembrane receptor domain containing protein, putative, expressed -
18 Sobic.007G219200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
19 Sobic.001G202400 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
20 Sobic.004G027000 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1


Gene co-expression network
sample Sobic010G224900 Sobic010G224900 Sobic003G151300 Sobic003G151300 Sobic010G224900--Sobic003G151300 Sobic001G107200 Sobic001G107200 Sobic010G224900--Sobic001G107200 Sobic004G006700 Sobic004G006700 Sobic010G224900--Sobic004G006700 Sobic009G026200 Sobic009G026200 Sobic010G224900--Sobic009G026200 Sobic005G211200 Sobic005G211200 Sobic010G224900--Sobic005G211200 Sobic002G348000 Sobic002G348000 Sobic010G224900--Sobic002G348000 Sobic001G215500 Sobic001G215500 Sobic010G224900--Sobic001G215500 Sobic003G128000 Sobic003G128000 Sobic010G224900--Sobic003G128000 Sobic001G069800 Sobic001G069800 Sobic010G224900--Sobic001G069800 Sobic003G151300--Sobic009G026200 Sobic008G008400 Sobic008G008400 Sobic003G151300--Sobic008G008400 Sobic008G174800 Sobic008G174800 Sobic003G151300--Sobic008G174800 Sobic003G151300--Sobic010G224900 Sobic009G162500 Sobic009G162500 Sobic003G151300--Sobic009G162500 Sobic003G151300--Sobic001G107200 Sobic008G021900 Sobic008G021900 Sobic003G151300--Sobic008G021900 Sobic004G203900 Sobic004G203900 Sobic003G151300--Sobic004G203900 Sobic004G134100 Sobic004G134100 Sobic003G151300--Sobic004G134100 Sobic001G528600 Sobic001G528600 Sobic001G107200--Sobic001G528600 Sobic006G191700 Sobic006G191700 Sobic001G107200--Sobic006G191700 Sobic001G107100 Sobic001G107100 Sobic001G107200--Sobic001G107100 Sobic002G350400 Sobic002G350400 Sobic001G107200--Sobic002G350400 Sobic005G047100 Sobic005G047100 Sobic001G107200--Sobic005G047100 Sobic007G094400 Sobic007G094400 Sobic001G107200--Sobic007G094400 Sobic003G250700 Sobic003G250700 Sobic001G107200--Sobic003G250700 Sobic003G011100 Sobic003G011100 Sobic001G107200--Sobic003G011100 Sobic006G278100 Sobic006G278100 Sobic001G107200--Sobic006G278100 Sobic004G006700--Sobic004G134100 Sobic004G006700--Sobic010G224900 Sobic004G006700--Sobic001G069800 Sobic004G006700--Sobic001G215500 Sobic004G006700--Sobic009G026200 Sobic002G427300 Sobic002G427300 Sobic004G006700--Sobic002G427300 Sobic004G051300 Sobic004G051300 Sobic004G006700--Sobic004G051300 Sobic009G123500 Sobic009G123500 Sobic004G006700--Sobic009G123500 Sobic002G393200 Sobic002G393200 Sobic004G006700--Sobic002G393200 Sobic009G026200--Sobic003G151300 Sobic009G026200--Sobic004G134100 Sobic009G026200--Sobic001G069800 Sobic009G026200--Sobic008G174800 Sobic009G026200--Sobic010G224900 Sobic009G026200--Sobic008G008400 Sobic009G026200--Sobic004G051300 Sobic009G026200--Sobic004G006700 Sobic001G230900 Sobic001G230900 Sobic009G026200--Sobic001G230900 Sobic002G319200 Sobic002G319200 Sobic005G211200--Sobic002G319200 Sobic009G165500 Sobic009G165500 Sobic005G211200--Sobic009G165500 Sobic001G040300 Sobic001G040300 Sobic005G211200--Sobic001G040300 Sobic006G052400 Sobic006G052400 Sobic005G211200--Sobic006G052400 Sobic001G505000 Sobic001G505000 Sobic005G211200--Sobic001G505000 Sobic008G135000 Sobic008G135000 Sobic005G211200--Sobic008G135000 Sobic008G058300 Sobic008G058300 Sobic005G211200--Sobic008G058300 Sobic009G126500 Sobic009G126500 Sobic005G211200--Sobic009G126500 Sobic005G211200--Sobic010G224900 Sobic003G356200 Sobic003G356200 Sobic002G348000--Sobic003G356200 Sobic002G272600 Sobic002G272600 Sobic002G348000--Sobic002G272600 Sobic004G349100 Sobic004G349100 Sobic002G348000--Sobic004G349100 Sobic001G350501 Sobic001G350501 Sobic002G348000--Sobic001G350501 Sobic009G164900 Sobic009G164900 Sobic002G348000--Sobic009G164900 Sobic002G348000--Sobic010G224900 Sobic003G024800 Sobic003G024800 Sobic002G348000--Sobic003G024800 Sobic008G142700 Sobic008G142700 Sobic002G348000--Sobic008G142700 Sobic001G427800 Sobic001G427800 Sobic002G348000--Sobic001G427800 Sobic009G207100 Sobic009G207100 Sobic001G215500--Sobic009G207100 Sobic001G215500--Sobic004G006700 Sobic008G093200 Sobic008G093200 Sobic001G215500--Sobic008G093200 Sobic001G215500--Sobic010G224900 Sobic004G182500 Sobic004G182500 Sobic001G215500--Sobic004G182500 Sobic004G027000 Sobic004G027000 Sobic001G215500--Sobic004G027000 Sobic001G202400 Sobic001G202400 Sobic001G215500--Sobic001G202400 Sobic004G225300 Sobic004G225300 Sobic001G215500--Sobic004G225300 Sobic006G195400 Sobic006G195400 Sobic001G215500--Sobic006G195400 Sobic001G392100 Sobic001G392100 Sobic003G128000--Sobic001G392100 Sobic009G155400 Sobic009G155400 Sobic003G128000--Sobic009G155400 Sobic001G009400 Sobic001G009400 Sobic003G128000--Sobic001G009400 Sobic008G163400 Sobic008G163400 Sobic003G128000--Sobic008G163400 Sobic004G217900 Sobic004G217900 Sobic003G128000--Sobic004G217900 Sobic001G149100 Sobic001G149100 Sobic003G128000--Sobic001G149100 Sobic003G239000 Sobic003G239000 Sobic003G128000--Sobic003G239000 Sobic001G347100 Sobic001G347100 Sobic003G128000--Sobic001G347100 Sobic001G254400 Sobic001G254400 Sobic003G128000--Sobic001G254400 Sobic001G069800--Sobic009G026200 Sobic004G086100 Sobic004G086100 Sobic001G069800--Sobic004G086100 Sobic004G067000 Sobic004G067000 Sobic001G069800--Sobic004G067000 Sobic001G069800--Sobic004G134100 Sobic001G420700 Sobic001G420700 Sobic001G069800--Sobic001G420700 Sobic001G069800--Sobic004G006700 Sobic001G069800--Sobic003G151300 Sobic001G467000 Sobic001G467000 Sobic001G069800--Sobic001G467000 Sobic008G139700 Sobic008G139700 Sobic001G069800--Sobic008G139700
Octagon: transcription factors


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