Gene annotation
Transcriptome id Sobic.005G211200.1
Synonym Sb05g026390
Functional annotation seed maturation protein PM27, putative, expressed
UniProt C5Y7V1
Pfam PF13664
Panther DB PTHR23241:SF55 PTHR23241
NCBI CDD KOG2886; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62580 : Late embryogenesis abundant protein (LEA) family protein
RAP-DB (Rice) LOC_Os11g44940.1 : seed maturation protein PM27, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ87283 , KQJ87270 , KQJ86345 , PNT62967
Barley -
Wheat TraesCS4B02G126900 , TraesCS4D02G144000 , TraesCS4A02G170800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G319200 expressed protein K11490: condensin-2 complex subunit H2
2 Sobic.009G165500 Lung seven transmembrane receptor domain containing protein, putative, expressed -
3 Sobic.001G040300 expressed protein -
4 Sobic.006G052400 LSM domain containing protein, expressed K12625: U6 snRNA-associated Sm-like protein LSm6
5 Sobic.001G505000 cyclin-dependent kinases regulatory subunit 1, putative, expressed K02219: cyclin-dependent kinase regulatory subunit CKS1
6 Sobic.008G135000 60S ribosomal protein L8, putative, expressed K02938: RP-L8e, large subunit ribosomal protein L8e
7 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
8 Sobic.009G126500 methyltransferase, putative, expressed -
9 Sobic.010G224900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
10 Sobic.001G528600 remorin family protein, putative, expressed -
11 Sobic.003G442400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
12 Sobic.010G267900 expressed protein -
13 Sobic.002G045100 LSM domain containing protein, expressed K11086: SNRPB, small nuclear ribonucleoprotein B and B'
14 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
15 Sobic.010G148400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsMADS75 - MADS-box family gene with M-alpha type-box, expressed -
16 Sobic.010G080500 SAM dependent carboxyl methyltransferase, putative, expressed -
17 Sobic.001G426200 OsWLIM2 - LIM domain protein, putative actin-binding protein and transcription factor, expressed K09377: cysteine and glycine-rich protein
18 Sobic.001G041200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09567: PPIH, peptidyl-prolyl isomerase H (cyclophilin H)
19 Sobic.001G107300 WD repeat-containing protein 5, putative, expressed K14963: WDR5, SWD3, COMPASS component SWD3
20 Sobic.009G191200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e


Gene co-expression network
sample Sobic005G211200 Sobic005G211200 Sobic002G319200 Sobic002G319200 Sobic005G211200--Sobic002G319200 Sobic009G165500 Sobic009G165500 Sobic005G211200--Sobic009G165500 Sobic001G040300 Sobic001G040300 Sobic005G211200--Sobic001G040300 Sobic006G052400 Sobic006G052400 Sobic005G211200--Sobic006G052400 Sobic001G505000 Sobic001G505000 Sobic005G211200--Sobic001G505000 Sobic008G135000 Sobic008G135000 Sobic005G211200--Sobic008G135000 Sobic008G058300 Sobic008G058300 Sobic005G211200--Sobic008G058300 Sobic009G126500 Sobic009G126500 Sobic005G211200--Sobic009G126500 Sobic010G224900 Sobic010G224900 Sobic005G211200--Sobic010G224900 Sobic002G045100 Sobic002G045100 Sobic002G319200--Sobic002G045100 Sobic001G242800 Sobic001G242800 Sobic002G319200--Sobic001G242800 Sobic001G371100 Sobic001G371100 Sobic002G319200--Sobic001G371100 Sobic002G319200--Sobic005G211200 Sobic010G032700 Sobic010G032700 Sobic002G319200--Sobic010G032700 Sobic001G528600 Sobic001G528600 Sobic002G319200--Sobic001G528600 Sobic004G152200 Sobic004G152200 Sobic002G319200--Sobic004G152200 Sobic002G319200--Sobic009G126500 Sobic002G161700 Sobic002G161700 Sobic002G319200--Sobic002G161700 Sobic003G084300 Sobic003G084300 Sobic009G165500--Sobic003G084300 Sobic009G165500--Sobic001G505000 Sobic006G149200 Sobic006G149200 Sobic009G165500--Sobic006G149200 Sobic010G238800 Sobic010G238800 Sobic009G165500--Sobic010G238800 Sobic010G054200 Sobic010G054200 Sobic009G165500--Sobic010G054200 Sobic001G429000 Sobic001G429000 Sobic009G165500--Sobic001G429000 Sobic009G165500--Sobic008G135000 Sobic001G412500 Sobic001G412500 Sobic009G165500--Sobic001G412500 Sobic006G201500 Sobic006G201500 Sobic009G165500--Sobic006G201500 Sobic007G163700 Sobic007G163700 Sobic001G040300--Sobic007G163700 Sobic001G083200 Sobic001G083200 Sobic001G040300--Sobic001G083200 Sobic003G024800 Sobic003G024800 Sobic001G040300--Sobic003G024800 Sobic008G138600 Sobic008G138600 Sobic001G040300--Sobic008G138600 Sobic006G143500 Sobic006G143500 Sobic001G040300--Sobic006G143500 Sobic001G230900 Sobic001G230900 Sobic001G040300--Sobic001G230900 Sobic001G517600 Sobic001G517600 Sobic001G040300--Sobic001G517600 Sobic004G032000 Sobic004G032000 Sobic001G040300--Sobic004G032000 Sobic002G353500 Sobic002G353500 Sobic001G040300--Sobic002G353500 Sobic006G052400--Sobic008G058300 Sobic001G058900 Sobic001G058900 Sobic006G052400--Sobic001G058900 Sobic009G050200 Sobic009G050200 Sobic006G052400--Sobic009G050200 Sobic001G096100 Sobic001G096100 Sobic006G052400--Sobic001G096100 Sobic006G115000 Sobic006G115000 Sobic006G052400--Sobic006G115000 Sobic001G225700 Sobic001G225700 Sobic006G052400--Sobic001G225700 Sobic003G442400 Sobic003G442400 Sobic006G052400--Sobic003G442400 Sobic003G018600 Sobic003G018600 Sobic006G052400--Sobic003G018600 Sobic009G117000 Sobic009G117000 Sobic006G052400--Sobic009G117000 Sobic001G505000--Sobic009G165500 Sobic001G107300 Sobic001G107300 Sobic001G505000--Sobic001G107300 Sobic001G505000--Sobic006G149200 Sobic002G289800 Sobic002G289800 Sobic001G505000--Sobic002G289800 Sobic010G222100 Sobic010G222100 Sobic001G505000--Sobic010G222100 Sobic001G505000--Sobic006G115000 Sobic006G013900 Sobic006G013900 Sobic001G505000--Sobic006G013900 Sobic001G505000--Sobic001G429000 Sobic003G174700 Sobic003G174700 Sobic001G505000--Sobic003G174700 Sobic008G135000--Sobic001G058900 Sobic009G233400 Sobic009G233400 Sobic008G135000--Sobic009G233400 Sobic002G304900 Sobic002G304900 Sobic008G135000--Sobic002G304900 Sobic002G115000 Sobic002G115000 Sobic008G135000--Sobic002G115000 Sobic001G057300 Sobic001G057300 Sobic008G135000--Sobic001G057300 Sobic009G191200 Sobic009G191200 Sobic008G135000--Sobic009G191200 Sobic001G334300 Sobic001G334300 Sobic008G135000--Sobic001G334300 Sobic001G085400 Sobic001G085400 Sobic008G135000--Sobic001G085400 Sobic010G069400 Sobic010G069400 Sobic008G135000--Sobic010G069400 Sobic005G157200 Sobic005G157200 Sobic008G058300--Sobic005G157200 Sobic003G025200 Sobic003G025200 Sobic008G058300--Sobic003G025200 Sobic001G331900 Sobic001G331900 Sobic008G058300--Sobic001G331900 Sobic008G058300--Sobic006G052400 Sobic004G300900 Sobic004G300900 Sobic008G058300--Sobic004G300900 Sobic010G029400 Sobic010G029400 Sobic008G058300--Sobic010G029400 Sobic004G002350 Sobic004G002350 Sobic008G058300--Sobic004G002350 Sobic002G078400 Sobic002G078400 Sobic008G058300--Sobic002G078400 Sobic001G377800 Sobic001G377800 Sobic008G058300--Sobic001G377800 Sobic009G126500--Sobic001G242800 Sobic009G126500--Sobic002G319200 Sobic002G309400 Sobic002G309400 Sobic009G126500--Sobic002G309400 Sobic009G238900 Sobic009G238900 Sobic009G126500--Sobic009G238900 Sobic001G112700 Sobic001G112700 Sobic009G126500--Sobic001G112700 Sobic002G392800 Sobic002G392800 Sobic009G126500--Sobic002G392800 Sobic010G218300 Sobic010G218300 Sobic009G126500--Sobic010G218300 Sobic009G126500--Sobic005G211200 Sobic007G183800 Sobic007G183800 Sobic009G126500--Sobic007G183800 Sobic003G151300 Sobic003G151300 Sobic010G224900--Sobic003G151300 Sobic001G107200 Sobic001G107200 Sobic010G224900--Sobic001G107200 Sobic004G006700 Sobic004G006700 Sobic010G224900--Sobic004G006700 Sobic009G026200 Sobic009G026200 Sobic010G224900--Sobic009G026200 Sobic010G224900--Sobic005G211200 Sobic002G348000 Sobic002G348000 Sobic010G224900--Sobic002G348000 Sobic001G215500 Sobic001G215500 Sobic010G224900--Sobic001G215500 Sobic003G128000 Sobic003G128000 Sobic010G224900--Sobic003G128000 Sobic001G069800 Sobic001G069800 Sobic010G224900--Sobic001G069800
Octagon: transcription factors


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