Gene annotation
Transcriptome id Sobic.001G264100.4,Sobic.001G264100.2,Sobic.001G264100.3
Synonym
Functional annotation tropinone reductase, putative, expressed
UniProt A0A1Z5S7Q4 , A0A1Z5S7P4 , A0A1Z5S7Z7
Pfam PF13561
Panther DB PTHR24322 PTHR24322:SF425
NCBI CDD KOG0725; Reductases with broad range of substrate specificities
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06060 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os03g16210.1 : tropinone reductase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus PNT56413 , PNT56415 , PNT56414


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G190900 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
2 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
3 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.001G432500 expressed protein -
5 Sobic.009G069901 - -
6 Sobic.001G291500 - -
7 Sobic.002G093600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed -
8 Sobic.002G087500 - -
9 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
10 Sobic.004G143801 - -
11 Sobic.008G077800 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.006G007300 - -
13 Sobic.008G028566 - -
14 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
15 Sobic.008G145200 aspartic proteinase nepenthesin precursor, putative, expressed -
16 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -
17 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
18 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
19 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
20 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G264100 Sobic001G264100 Sobic005G190900 Sobic005G190900 Sobic001G264100--Sobic005G190900 Sobic002G298400 Sobic002G298400 Sobic001G264100--Sobic002G298400 Sobic002G040400 Sobic002G040400 Sobic001G264100--Sobic002G040400 Sobic001G432500 Sobic001G432500 Sobic001G264100--Sobic001G432500 Sobic009G069901 Sobic009G069901 Sobic001G264100--Sobic009G069901 Sobic001G291500 Sobic001G291500 Sobic001G264100--Sobic001G291500 Sobic002G093600 Sobic002G093600 Sobic001G264100--Sobic002G093600 Sobic002G087500 Sobic002G087500 Sobic001G264100--Sobic002G087500 Sobic002G391700 Sobic002G391700 Sobic001G264100--Sobic002G391700 Sobic001G019300 Sobic001G019300 Sobic005G190900--Sobic001G019300 Sobic005G190900--Sobic001G291500 Sobic002G265400 Sobic002G265400 Sobic005G190900--Sobic002G265400 Sobic005G190900--Sobic001G432500 Sobic003G106500 Sobic003G106500 Sobic005G190900--Sobic003G106500 Sobic005G063900 Sobic005G063900 Sobic005G190900--Sobic005G063900 Sobic003G135800 Sobic003G135800 Sobic005G190900--Sobic003G135800 Sobic010G225500 Sobic010G225500 Sobic005G190900--Sobic010G225500 Sobic002G371900 Sobic002G371900 Sobic005G190900--Sobic002G371900 Sobic002G298400--Sobic002G040400 Sobic002G298400--Sobic002G087500 Sobic002G298400--Sobic002G391700 Sobic008G028600 Sobic008G028600 Sobic002G298400--Sobic008G028600 Sobic002G298400--Sobic002G093600 Sobic008G077800 Sobic008G077800 Sobic002G298400--Sobic008G077800 Sobic004G143801 Sobic004G143801 Sobic002G298400--Sobic004G143801 Sobic008G028566 Sobic008G028566 Sobic002G298400--Sobic008G028566 Sobic005G219000 Sobic005G219000 Sobic002G298400--Sobic005G219000 Sobic002G040400--Sobic008G028600 Sobic002G040400--Sobic002G087500 Sobic002G040400--Sobic002G298400 Sobic002G040400--Sobic002G391700 Sobic006G005500 Sobic006G005500 Sobic002G040400--Sobic006G005500 Sobic002G040400--Sobic005G219000 Sobic001G125700 Sobic001G125700 Sobic002G040400--Sobic001G125700 Sobic002G040400--Sobic008G077800 Sobic007G076000 Sobic007G076000 Sobic002G040400--Sobic007G076000 Sobic001G432500--Sobic008G028600 Sobic001G432500--Sobic002G040400 Sobic001G432500--Sobic002G298400 Sobic001G432500--Sobic002G087500 Sobic001G432500--Sobic005G219000 Sobic001G432500--Sobic006G005500 Sobic001G432500--Sobic002G391700 Sobic001G432500--Sobic001G125700 Sobic001G432500--Sobic007G076000 Sobic009G069901--Sobic002G298400 Sobic009G069901--Sobic002G040400 Sobic009G069901--Sobic002G087500 Sobic009G069901--Sobic002G391700 Sobic009G069901--Sobic002G093600 Sobic009G069901--Sobic008G028566 Sobic009G069901--Sobic008G028600 Sobic009G069901--Sobic004G143801 Sobic009G069901--Sobic008G077800 Sobic006G007100 Sobic006G007100 Sobic001G291500--Sobic006G007100 Sobic005G219100 Sobic005G219100 Sobic001G291500--Sobic005G219100 Sobic001G291500--Sobic005G219000 Sobic006G005400 Sobic006G005400 Sobic001G291500--Sobic006G005400 Sobic001G291500--Sobic001G125700 Sobic001G291500--Sobic006G005500 Sobic006G007300 Sobic006G007300 Sobic001G291500--Sobic006G007300 Sobic001G291500--Sobic001G432500 Sobic001G291500--Sobic008G077800 Sobic002G093600--Sobic002G391700 Sobic002G093600--Sobic008G077800 Sobic002G093600--Sobic002G298400 Sobic002G093600--Sobic002G087500 Sobic002G093600--Sobic006G007300 Sobic002G093600--Sobic008G028566 Sobic002G093600--Sobic002G040400 Sobic002G093600--Sobic008G028600 Sobic002G093600--Sobic004G143801 Sobic002G087500--Sobic002G040400 Sobic002G087500--Sobic002G298400 Sobic002G087500--Sobic008G028600 Sobic002G087500--Sobic002G391700 Sobic002G087500--Sobic002G093600 Sobic002G087500--Sobic008G077800 Sobic002G087500--Sobic005G219000 Sobic002G087500--Sobic006G005500 Sobic002G087500--Sobic001G125700 Sobic002G391700--Sobic002G093600 Sobic002G391700--Sobic002G087500 Sobic002G391700--Sobic002G298400 Sobic002G391700--Sobic002G040400 Sobic002G391700--Sobic008G077800 Sobic002G391700--Sobic008G028600 Sobic002G391700--Sobic006G007300 Sobic002G391700--Sobic008G028566 Sobic002G391700--Sobic005G219000
Octagon: transcription factors


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