Gene annotation
Transcriptome id Sobic.001G329600.1
Synonym Sb01g031860
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt A0A1Z5S8S7
Pfam -
Panther DB PTHR33922 PTHR33922:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g32420.1 : expressed protein
MaizeGDB (Corn) Zm00025a052228 , Zm00025a015074
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G230900 RNA recognition motif containing protein, putative, expressed -
2 Sobic.001G416800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
3 Sobic.002G056300 AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
4 Sobic.002G041533 - -
5 Sobic.002G403400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
6 Sobic.003G127600 ubiquitin-conjugating enzyme, putative, expressed K06688: UBE2C, ubiquitin-conjugating enzyme E2 C
7 Sobic.009G155500 cytochrome P450, putative, expressed -
8 Sobic.002G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
9 Sobic.001G193600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cystathionine gamma-synthase, putative, expressed K01761: methionine-gamma-lyase
10 Sobic.002G209300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.003G350100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
12 Sobic.002G092700 harpin-induced protein 1 domain containing protein, expressed -
13 Sobic.001G200500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
14 Sobic.009G123000 expressed protein -
15 Sobic.008G133100 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
16 Sobic.008G015000 cytochrome P450, putative, expressed -
17 Sobic.003G067300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
18 Sobic.003G025000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@carnitine racemase like protein, putative, expressed -
19 Sobic.001G193400 DUF538 domain containing protein, putative, expressed -
20 Sobic.010G155500 glycosyl hydrolases family 17, putative, expressed -


Gene co-expression network
sample Sobic001G329600 Sobic001G329600 Sobic004G230900 Sobic004G230900 Sobic001G329600--Sobic004G230900 Sobic001G416800 Sobic001G416800 Sobic001G329600--Sobic001G416800 Sobic002G056300 Sobic002G056300 Sobic001G329600--Sobic002G056300 Sobic002G041533 Sobic002G041533 Sobic001G329600--Sobic002G041533 Sobic002G403400 Sobic002G403400 Sobic001G329600--Sobic002G403400 Sobic003G127600 Sobic003G127600 Sobic001G329600--Sobic003G127600 Sobic009G155500 Sobic009G155500 Sobic001G329600--Sobic009G155500 Sobic002G059200 Sobic002G059200 Sobic001G329600--Sobic002G059200 Sobic001G193600 Sobic001G193600 Sobic001G329600--Sobic001G193600 Sobic003G350100 Sobic003G350100 Sobic004G230900--Sobic003G350100 Sobic004G230900--Sobic002G403400 Sobic003G067300 Sobic003G067300 Sobic004G230900--Sobic003G067300 Sobic001G193400 Sobic001G193400 Sobic004G230900--Sobic001G193400 Sobic003G067500 Sobic003G067500 Sobic004G230900--Sobic003G067500 Sobic008G133100 Sobic008G133100 Sobic004G230900--Sobic008G133100 Sobic004G265400 Sobic004G265400 Sobic004G230900--Sobic004G265400 Sobic001G200500 Sobic001G200500 Sobic004G230900--Sobic001G200500 Sobic004G230900--Sobic002G056300 Sobic001G416800--Sobic003G127600 Sobic001G416900 Sobic001G416900 Sobic001G416800--Sobic001G416900 Sobic001G416800--Sobic002G056300 Sobic001G416800--Sobic002G059200 Sobic001G416800--Sobic002G403400 Sobic009G123000 Sobic009G123000 Sobic001G416800--Sobic009G123000 Sobic001G416800--Sobic003G350100 Sobic008G061000 Sobic008G061000 Sobic001G416800--Sobic008G061000 Sobic004G227000 Sobic004G227000 Sobic001G416800--Sobic004G227000 Sobic002G056300--Sobic002G059200 Sobic002G056300--Sobic002G403400 Sobic002G056300--Sobic003G350100 Sobic002G056300--Sobic003G067300 Sobic002G056300--Sobic004G265400 Sobic002G056300--Sobic001G416800 Sobic002G056300--Sobic008G133100 Sobic007G149600 Sobic007G149600 Sobic002G056300--Sobic007G149600 Sobic002G056300--Sobic001G200500 Sobic007G013100 Sobic007G013100 Sobic002G041533--Sobic007G013100 Sobic003G008850 Sobic003G008850 Sobic002G041533--Sobic003G008850 Sobic008G164525 Sobic008G164525 Sobic002G041533--Sobic008G164525 Sobic001G434450 Sobic001G434450 Sobic002G041533--Sobic001G434450 Sobic004G016600 Sobic004G016600 Sobic002G041533--Sobic004G016600 Sobic009G152901 Sobic009G152901 Sobic002G041533--Sobic009G152901 Sobic008G119000 Sobic008G119000 Sobic002G041533--Sobic008G119000 Sobic001G120100 Sobic001G120100 Sobic002G041533--Sobic001G120100 Sobic004G197300 Sobic004G197300 Sobic002G041533--Sobic004G197300 Sobic002G403400--Sobic003G350100 Sobic002G403400--Sobic002G059200 Sobic002G403400--Sobic004G265400 Sobic002G403400--Sobic003G067300 Sobic002G403400--Sobic007G149600 Sobic002G403400--Sobic001G193400 Sobic002G403400--Sobic003G067500 Sobic007G221800 Sobic007G221800 Sobic002G403400--Sobic007G221800 Sobic003G200501 Sobic003G200501 Sobic002G403400--Sobic003G200501 Sobic003G127600--Sobic001G416800 Sobic003G127600--Sobic009G123000 Sobic003G127600--Sobic001G416900 Sobic003G127600--Sobic002G056300 Sobic003G127600--Sobic002G059200 Sobic003G127600--Sobic004G227000 Sobic003G127600--Sobic008G061000 Sobic004G128600 Sobic004G128600 Sobic003G127600--Sobic004G128600 Sobic003G127600--Sobic002G403400 Sobic009G155500--Sobic002G056300 Sobic009G155500--Sobic001G416800 Sobic009G155500--Sobic003G127600 Sobic009G155500--Sobic009G123000 Sobic009G155500--Sobic001G416900 Sobic009G155500--Sobic002G059200 Sobic009G155500--Sobic004G230900 Sobic009G155500--Sobic002G403400 Sobic002G311400 Sobic002G311400 Sobic009G155500--Sobic002G311400 Sobic002G059200--Sobic002G403400 Sobic002G059200--Sobic003G350100 Sobic002G059200--Sobic004G265400 Sobic002G059200--Sobic007G149600 Sobic002G059200--Sobic001G193400 Sobic002G059200--Sobic003G067300 Sobic002G059200--Sobic002G056300 Sobic002G059200--Sobic007G221800 Sobic002G059200--Sobic003G067500 Sobic007G111600 Sobic007G111600 Sobic001G193600--Sobic007G111600 Sobic007G116600 Sobic007G116600 Sobic001G193600--Sobic007G116600 Sobic003G099500 Sobic003G099500 Sobic001G193600--Sobic003G099500 Sobic008G131800 Sobic008G131800 Sobic001G193600--Sobic008G131800 Sobic001G460800 Sobic001G460800 Sobic001G193600--Sobic001G460800 Sobic004G239000 Sobic004G239000 Sobic001G193600--Sobic004G239000 Sobic002G004100 Sobic002G004100 Sobic001G193600--Sobic002G004100 Sobic001G525000 Sobic001G525000 Sobic001G193600--Sobic001G525000 Sobic002G430200 Sobic002G430200 Sobic001G193600--Sobic002G430200
Octagon: transcription factors


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