Gene annotation
Transcriptome id Sobic.001G349800.2,Sobic.001G349800.1
Synonym Sb01g033480, PLDALPHA1, PLD,PALPHAD1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Phospholipase dalpha 1 (PubMedID : 26320239)
phospholipase D, putative, expressed
UniProt A0A1B6QMT2 , A0A1B6QMR6
Pfam PF12357 PF00614 PF00168 PF00168 PF00614 PF12357
Panther DB PTHR18896:SF73 PTHR18896 PTHR18896 PTHR18896:SF73
NCBI CDD -
KEGG Orthology K01115; phospholipase D1/2
Gene Ontology GO:0003824; catalytic activity GO:0005515protein binding GO:0005515protein binding GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT3G15730 : phospholipase D alpha 1
RAP-DB (Rice) LOC_Os03g27370.1 : phospholipase D, putative, expressed
MaizeGDB (Corn) Zm00025a009638 , Zm00025a009333 , Zm00025a033245 , Zm00025a051292 , Zm00025a058158 , Zm00025a043052 , Zm00025a035726 , Zm00025a013932 , Zm00025a052107 , Zm00025a002737 , Zm00025a023249
Brachypodium KQK17763 , KQK07277 , KQK07276 , KQJ90277 , KQK21428 , KQK21427
Barley HORVU1Hr1G025370.4 , HORVU1Hr1G025370.1 , HORVU1Hr1G025370.2 , HORVU1Hr1G025370.3 , HORVU0Hr1G009480.1 , HORVU0Hr1G009480.3 , HORVU0Hr1G009480.2 , HORVU0Hr1G009480.5 , HORVU0Hr1G009480.4 , HORVU0Hr1G009480.7 , HORVU0Hr1G009480.6 , HORVU0Hr1G009480.9 , HORVU0Hr1G009480.8 , HORVU1Hr1G082940.1 , HORVU1Hr1G082940.2 , HORVU1Hr1G082940.3 , HORVU1Hr1G082950.13 , HORVU1Hr1G082950.12 , HORVU1Hr1G082950.10 , HORVU1Hr1G082950.11 , HORVU1Hr1G082950.9 , HORVU1Hr1G082950.8 , HORVU1Hr1G082950.3 , HORVU1Hr1G082950.2 , HORVU1Hr1G082950.1 , HORVU1Hr1G082950.7 , HORVU1Hr1G082950.6 , HORVU1Hr1G082950.5 , HORVU1Hr1G082950.4 , HORVU1Hr1G082890.6 , HORVU1Hr1G082890.4 , HORVU1Hr1G082890.5 , HORVU1Hr1G082890.2 , HORVU1Hr1G082890.3
Wheat TraesCS1A02G373100 , TraesCS1A02G373100 , TraesCS1A02G373100 , TraesCS1B02G393300 , TraesCS1B02G393300 , TraesCS1B02G393300 , TraesCS1B02G393300 , TraesCS7D02G372800 , TraesCS7B02G277900 , TraesCS7B02G277900 , TraesCS4B02G377600 , TraesCS1B02G135200 , TraesCS1B02G135200 , TraesCSU02G145400 , TraesCSU02G145400 , TraesCS1D02G116700 , TraesCS5B02G222500 , TraesCS1A02G115300 , TraesCS7A02G376500 , TraesCS7A02G376500 , TraesCS7A02G376500 , TraesCS1A02G373100 , TraesCS7A02G376500 , TraesCS7A02G376500 , TraesCS1D02G379900 , TraesCS1D02G379900 , TraesCS1D02G379900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G154800 expressed protein -
2 Sobic.003G046200 ATPase, putative, expressed -
3 Sobic.001G393600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
4 Sobic.009G194100 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.008G147800 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.007G100900 - -
7 Sobic.003G298500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@O-methyltransferase, putative, expressed -
8 Sobic.009G190900 expressed protein -
9 Sobic.005G030200 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.004G327100 atATG18b, putative, expressed K17908: WIPI1_2, autophagy-related protein 18
11 Sobic.002G013500 pentatricopeptide, putative, expressed -
12 Sobic.010G065500 BHLH transcription factor, putative, expressed -
13 Sobic.008G045232 - -
14 Sobic.001G482500 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
15 Sobic.008G024000 expressed protein -
16 Sobic.001G152500 OsFBX387 - F-box domain containing protein, expressed -
17 Sobic.002G191300 expressed protein -
18 Sobic.002G289701 - -
19 Sobic.008G045100 - -
20 Sobic.003G083100 - -


Gene co-expression network
sample Sobic001G349800 Sobic001G349800 Sobic003G154800 Sobic003G154800 Sobic001G349800--Sobic003G154800 Sobic003G046200 Sobic003G046200 Sobic001G349800--Sobic003G046200 Sobic001G393600 Sobic001G393600 Sobic001G349800--Sobic001G393600 Sobic009G194100 Sobic009G194100 Sobic001G349800--Sobic009G194100 Sobic008G147800 Sobic008G147800 Sobic001G349800--Sobic008G147800 Sobic007G100900 Sobic007G100900 Sobic001G349800--Sobic007G100900 Sobic003G298500 Sobic003G298500 Sobic001G349800--Sobic003G298500 Sobic009G190900 Sobic009G190900 Sobic001G349800--Sobic009G190900 Sobic005G030200 Sobic005G030200 Sobic001G349800--Sobic005G030200 Sobic003G154800--Sobic007G100900 Sobic003G154800--Sobic003G046200 Sobic003G318650 Sobic003G318650 Sobic003G154800--Sobic003G318650 Sobic002G013500 Sobic002G013500 Sobic003G154800--Sobic002G013500 Sobic002G085700 Sobic002G085700 Sobic003G154800--Sobic002G085700 Sobic010G140800 Sobic010G140800 Sobic003G154800--Sobic010G140800 Sobic004G327100 Sobic004G327100 Sobic003G154800--Sobic004G327100 Sobic003G154800--Sobic001G349800 Sobic005G201800 Sobic005G201800 Sobic003G154800--Sobic005G201800 Sobic003G046200--Sobic003G154800 Sobic003G046200--Sobic007G100900 Sobic003G046200--Sobic001G349800 Sobic003G046200--Sobic001G393600 Sobic006G088500 Sobic006G088500 Sobic003G046200--Sobic006G088500 Sobic003G046200--Sobic004G327100 Sobic003G046200--Sobic002G013500 Sobic008G024000 Sobic008G024000 Sobic003G046200--Sobic008G024000 Sobic010G065500 Sobic010G065500 Sobic003G046200--Sobic010G065500 Sobic001G393600--Sobic010G065500 Sobic001G393600--Sobic004G327100 Sobic002G070400 Sobic002G070400 Sobic001G393600--Sobic002G070400 Sobic001G393600--Sobic006G088500 Sobic004G082050 Sobic004G082050 Sobic001G393600--Sobic004G082050 Sobic001G393600--Sobic007G100900 Sobic003G407400 Sobic003G407400 Sobic001G393600--Sobic003G407400 Sobic005G013700 Sobic005G013700 Sobic001G393600--Sobic005G013700 Sobic003G066250 Sobic003G066250 Sobic001G393600--Sobic003G066250 Sobic001G242350 Sobic001G242350 Sobic009G194100--Sobic001G242350 Sobic009G142700 Sobic009G142700 Sobic009G194100--Sobic009G142700 Sobic007G215300 Sobic007G215300 Sobic009G194100--Sobic007G215300 Sobic009G194100--Sobic003G154800 Sobic001G213150 Sobic001G213150 Sobic009G194100--Sobic001G213150 Sobic007G095850 Sobic007G095850 Sobic009G194100--Sobic007G095850 Sobic010G228300 Sobic010G228300 Sobic009G194100--Sobic010G228300 Sobic010G238500 Sobic010G238500 Sobic009G194100--Sobic010G238500 Sobic003G060900 Sobic003G060900 Sobic009G194100--Sobic003G060900 Sobic009G258200 Sobic009G258200 Sobic008G147800--Sobic009G258200 Sobic008G147800--Sobic010G065500 Sobic005G205000 Sobic005G205000 Sobic008G147800--Sobic005G205000 Sobic003G083100 Sobic003G083100 Sobic008G147800--Sobic003G083100 Sobic005G219800 Sobic005G219800 Sobic008G147800--Sobic005G219800 Sobic008G045900 Sobic008G045900 Sobic008G147800--Sobic008G045900 Sobic007G131300 Sobic007G131300 Sobic008G147800--Sobic007G131300 Sobic008G045100 Sobic008G045100 Sobic008G147800--Sobic008G045100 Sobic009G142600 Sobic009G142600 Sobic008G147800--Sobic009G142600 Sobic007G100900--Sobic004G327100 Sobic004G122700 Sobic004G122700 Sobic007G100900--Sobic004G122700 Sobic008G008701 Sobic008G008701 Sobic007G100900--Sobic008G008701 Sobic005G207550 Sobic005G207550 Sobic007G100900--Sobic005G207550 Sobic001G138500 Sobic001G138500 Sobic007G100900--Sobic001G138500 Sobic001G190600 Sobic001G190600 Sobic007G100900--Sobic001G190600 Sobic008G008601 Sobic008G008601 Sobic007G100900--Sobic008G008601 Sobic006G137900 Sobic006G137900 Sobic007G100900--Sobic006G137900 Sobic004G090900 Sobic004G090900 Sobic007G100900--Sobic004G090900 Sobic003G298500--Sobic007G100900 Sobic003G298500--Sobic004G327100 Sobic002G063201 Sobic002G063201 Sobic003G298500--Sobic002G063201 Sobic007G087500 Sobic007G087500 Sobic003G298500--Sobic007G087500 Sobic001G452300 Sobic001G452300 Sobic003G298500--Sobic001G452300 Sobic003G298500--Sobic008G008601 Sobic004G184900 Sobic004G184900 Sobic003G298500--Sobic004G184900 Sobic003G298500--Sobic008G024000 Sobic002G063500 Sobic002G063500 Sobic003G298500--Sobic002G063500 Sobic002G277900 Sobic002G277900 Sobic009G190900--Sobic002G277900 Sobic001G152240 Sobic001G152240 Sobic009G190900--Sobic001G152240 Sobic005G144101 Sobic005G144101 Sobic009G190900--Sobic005G144101 Sobic010G266000 Sobic010G266000 Sobic009G190900--Sobic010G266000 Sobic010G273200 Sobic010G273200 Sobic009G190900--Sobic010G273200 Sobic003G008100 Sobic003G008100 Sobic009G190900--Sobic003G008100 Sobic002G103400 Sobic002G103400 Sobic009G190900--Sobic002G103400 Sobic006G004700 Sobic006G004700 Sobic009G190900--Sobic006G004700 Sobic009G190900--Sobic004G082050 Sobic002G191300 Sobic002G191300 Sobic005G030200--Sobic002G191300 Sobic005G030200--Sobic003G083100 Sobic002G289701 Sobic002G289701 Sobic005G030200--Sobic002G289701 Sobic001G406600 Sobic001G406600 Sobic005G030200--Sobic001G406600 Sobic005G120433 Sobic005G120433 Sobic005G030200--Sobic005G120433 Sobic005G030200--Sobic008G045100 Sobic001G234700 Sobic001G234700 Sobic005G030200--Sobic001G234700
Octagon: transcription factors


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