Gene annotation
Transcriptome id Sobic.001G386200.2,Sobic.001G386200.1
Synonym ACHT4, Sb01g036620
Functional annotation Atypical Cys His rich thioredoxin 4 (Os) (PubMedID : 27208977)
thioredoxin, putative, expressed
UniProt A0A1B6QNH3 , A0A1B6QNG8
Pfam PF00085
Panther DB PTHR10438 PTHR10438:SF245
NCBI CDD KOG0907; Thioredoxin
KEGG Orthology -
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0006662glycerol ether metabolic process


Orthologs (automatic annotation)
TAIR AT1G08570 : atypical CYS HIS rich thioredoxin 4
RAP-DB (Rice) LOC_Os03g21000.1 : thioredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a002280 , Zm00025a052464
Brachypodium -
Barley HORVU4Hr1G051400.8 , HORVU4Hr1G051400.9 , HORVU4Hr1G051400.2 , HORVU4Hr1G051400.3 , HORVU4Hr1G051400.4 , HORVU4Hr1G051400.5 , HORVU4Hr1G051400.6 , HORVU4Hr1G051400.7
Wheat TraesCS4A02G130400 , TraesCS4B02G174100 , TraesCS4D02G176100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G098200 magnesium-dependent phosphatase 1, putative, expressed K17619: magnesium-dependent phosphatase 1
2 Sobic.001G395400 ubiquitin-conjugating enzyme, putative, expressed K10578: UBE2J1, NCUBE1, ubiquitin-conjugating enzyme E2 J1
3 Sobic.004G253000 AGAP000425-PA, putative, expressed K13120: protein FAM32A
4 Sobic.001G224700 expressed protein -
5 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
6 Sobic.003G000800 RWP-RK domain-containing protein, putative, expressed -
7 Sobic.004G234900 membrane-anchored ubiquitin-fold protein, putative, expressed -
8 Sobic.002G273900 expressed protein -
9 Sobic.001G007200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
10 Sobic.003G050600 expressed protein -
11 Sobic.001G314500 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
12 Sobic.007G166100 no apical meristem protein, putative, expressed -
13 Sobic.007G079700 pentatricopeptide, putative, expressed -
14 Sobic.001G054200 green ripe-like, putative, expressed -
15 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
16 Sobic.001G463100 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.009G114800 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
18 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
19 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
20 Sobic.003G344900 selT-like protein precursor, putative, expressed -


Gene co-expression network
sample Sobic001G386200 Sobic001G386200 Sobic001G098200 Sobic001G098200 Sobic001G386200--Sobic001G098200 Sobic001G395400 Sobic001G395400 Sobic001G386200--Sobic001G395400 Sobic004G253000 Sobic004G253000 Sobic001G386200--Sobic004G253000 Sobic001G224700 Sobic001G224700 Sobic001G386200--Sobic001G224700 Sobic002G400000 Sobic002G400000 Sobic001G386200--Sobic002G400000 Sobic003G000800 Sobic003G000800 Sobic001G386200--Sobic003G000800 Sobic004G234900 Sobic004G234900 Sobic001G386200--Sobic004G234900 Sobic002G273900 Sobic002G273900 Sobic001G386200--Sobic002G273900 Sobic001G007200 Sobic001G007200 Sobic001G386200--Sobic001G007200 Sobic001G098200--Sobic004G234900 Sobic006G225600 Sobic006G225600 Sobic001G098200--Sobic006G225600 Sobic001G098200--Sobic004G253000 Sobic002G251700 Sobic002G251700 Sobic001G098200--Sobic002G251700 Sobic010G090900 Sobic010G090900 Sobic001G098200--Sobic010G090900 Sobic003G050600 Sobic003G050600 Sobic001G098200--Sobic003G050600 Sobic004G301900 Sobic004G301900 Sobic001G098200--Sobic004G301900 Sobic001G051200 Sobic001G051200 Sobic001G098200--Sobic001G051200 Sobic003G044200 Sobic003G044200 Sobic001G098200--Sobic003G044200 Sobic007G166100 Sobic007G166100 Sobic001G395400--Sobic007G166100 Sobic001G395400--Sobic002G400000 Sobic006G263900 Sobic006G263900 Sobic001G395400--Sobic006G263900 Sobic003G416400 Sobic003G416400 Sobic001G395400--Sobic003G416400 Sobic010G168600 Sobic010G168600 Sobic001G395400--Sobic010G168600 Sobic003G077900 Sobic003G077900 Sobic001G395400--Sobic003G077900 Sobic010G000900 Sobic010G000900 Sobic001G395400--Sobic010G000900 Sobic001G057800 Sobic001G057800 Sobic001G395400--Sobic001G057800 Sobic009G165800 Sobic009G165800 Sobic001G395400--Sobic009G165800 Sobic004G253000--Sobic003G050600 Sobic010G083700 Sobic010G083700 Sobic004G253000--Sobic010G083700 Sobic004G253000--Sobic001G098200 Sobic003G015900 Sobic003G015900 Sobic004G253000--Sobic003G015900 Sobic003G250500 Sobic003G250500 Sobic004G253000--Sobic003G250500 Sobic004G059000 Sobic004G059000 Sobic004G253000--Sobic004G059000 Sobic004G253000--Sobic001G051200 Sobic009G246950 Sobic009G246950 Sobic004G253000--Sobic009G246950 Sobic004G253000--Sobic003G000800 Sobic001G224700--Sobic004G234900 Sobic005G117400 Sobic005G117400 Sobic001G224700--Sobic005G117400 Sobic003G333400 Sobic003G333400 Sobic001G224700--Sobic003G333400 Sobic004G183400 Sobic004G183400 Sobic001G224700--Sobic004G183400 Sobic002G122700 Sobic002G122700 Sobic001G224700--Sobic002G122700 Sobic001G224700--Sobic001G386200 Sobic010G012300 Sobic010G012300 Sobic001G224700--Sobic010G012300 Sobic002G222800 Sobic002G222800 Sobic001G224700--Sobic002G222800 Sobic001G158500 Sobic001G158500 Sobic001G224700--Sobic001G158500 Sobic007G168600 Sobic007G168600 Sobic002G400000--Sobic007G168600 Sobic002G400000--Sobic003G077900 Sobic009G198500 Sobic009G198500 Sobic002G400000--Sobic009G198500 Sobic004G130900 Sobic004G130900 Sobic002G400000--Sobic004G130900 Sobic001G433400 Sobic001G433400 Sobic002G400000--Sobic001G433400 Sobic002G400000--Sobic001G395400 Sobic004G327300 Sobic004G327300 Sobic002G400000--Sobic004G327300 Sobic009G004600 Sobic009G004600 Sobic002G400000--Sobic009G004600 Sobic002G400000--Sobic010G000900 Sobic003G000800--Sobic009G246950 Sobic001G031200 Sobic001G031200 Sobic003G000800--Sobic001G031200 Sobic001G078500 Sobic001G078500 Sobic003G000800--Sobic001G078500 Sobic003G000800--Sobic004G253000 Sobic001G512600 Sobic001G512600 Sobic003G000800--Sobic001G512600 Sobic001G371300 Sobic001G371300 Sobic003G000800--Sobic001G371300 Sobic003G000800--Sobic010G083700 Sobic001G149700 Sobic001G149700 Sobic003G000800--Sobic001G149700 Sobic007G186300 Sobic007G186300 Sobic003G000800--Sobic007G186300 Sobic004G234900--Sobic001G098200 Sobic004G234900--Sobic006G225600 Sobic004G234900--Sobic002G122700 Sobic001G162100 Sobic001G162100 Sobic004G234900--Sobic001G162100 Sobic004G234900--Sobic002G251700 Sobic010G174500 Sobic010G174500 Sobic004G234900--Sobic010G174500 Sobic006G254800 Sobic006G254800 Sobic004G234900--Sobic006G254800 Sobic001G180900 Sobic001G180900 Sobic004G234900--Sobic001G180900 Sobic004G234900--Sobic010G000900 Sobic002G273900--Sobic004G059000 Sobic002G273900--Sobic004G253000 Sobic002G273900--Sobic003G050600 Sobic007G079700 Sobic007G079700 Sobic002G273900--Sobic007G079700 Sobic006G054500 Sobic006G054500 Sobic002G273900--Sobic006G054500 Sobic001G364600 Sobic001G364600 Sobic002G273900--Sobic001G364600 Sobic007G097900 Sobic007G097900 Sobic002G273900--Sobic007G097900 Sobic002G273900--Sobic003G250500 Sobic008G128600 Sobic008G128600 Sobic002G273900--Sobic008G128600 Sobic001G007200--Sobic010G083700 Sobic001G415500 Sobic001G415500 Sobic001G007200--Sobic001G415500 Sobic001G007200--Sobic007G186300 Sobic010G253800 Sobic010G253800 Sobic001G007200--Sobic010G253800 Sobic004G086600 Sobic004G086600 Sobic001G007200--Sobic004G086600 Sobic001G073000 Sobic001G073000 Sobic001G007200--Sobic001G073000 Sobic001G007200--Sobic009G246950 Sobic004G141700 Sobic004G141700 Sobic001G007200--Sobic004G141700 Sobic009G146100 Sobic009G146100 Sobic001G007200--Sobic009G146100
Octagon: transcription factors


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