Gene annotation
Transcriptome id Sobic.001G388300.3,Sobic.001G388300.1,Sobic.001G388300.2,Sobic.001G388300.4
Synonym AREB3, DPBF3, Sb01g036810
Functional annotation bZIP transcription factor domain containing protein, expressed
UniProt A0A1Z5S9T5 , A0A1Z5S9S0 , A0A1B6QNJ1
Pfam PF00170
Panther DB PTHR22952 PTHR22952:SF211
NCBI CDD -
KEGG Orthology K14432; ABA responsive element binding factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G56850 : ABA-responsive element binding protein 3
RAP-DB (Rice) LOC_Os03g20650.1 : bZIP transcription factor domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ92730 , KQK21905
Barley HORVU2Hr1G110500.2 , HORVU2Hr1G110500.1 , HORVU2Hr1G117380.1 , HORVU2Hr1G117380.2 , HORVU2Hr1G117380.3 , HORVU2Hr1G117380.4 , HORVU4Hr1G083720.2 , HORVU4Hr1G083720.1
Wheat TraesCS2B02G523600 , TraesCS2A02G099400 , TraesCS2B02G564800 , TraesCS2D02G495700 , TraesCS2D02G098700 , TraesCS2A02G534200 , TraesCS4D02G335000 , TraesCS4B02G338700 , TraesCS2A02G495400 , TraesCS4B02G175800 , TraesCS4A02G128900 , TraesCS2B02G115700 , TraesCS4D02G177700 , TraesCS2D02G536700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G245700 slowmo homolog, putative, expressed -
2 Sobic.001G413300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
3 Sobic.003G208200 - -
4 Sobic.004G176950 - -
5 Sobic.003G351501 - -
6 Sobic.002G033550 - -
7 Sobic.010G268500 laccase precursor protein, putative, expressed K05909: laccase
8 Sobic.003G161900 - -
9 Sobic.002G413100 DUF567 domain containing protein, putative, expressed -
10 Sobic.007G199901 - -
11 Sobic.003G053100 - -
12 Sobic.009G170050 - -
13 Sobic.001G224500 - -
14 Sobic.004G169401 - -
15 Sobic.005G104900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G117850 - -
17 Sobic.001G261444 - -
18 Sobic.005G093901 - -
19 Sobic.003G173116 - K02724: photosystem II PsbZ protein
20 Sobic.007G183200 down-regulated TF in developmental senescence(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed K18486: heart-and neural crest derivatives-expressed protein 2


Gene co-expression network
sample Sobic001G388300 Sobic001G388300 Sobic002G245700 Sobic002G245700 Sobic001G388300--Sobic002G245700 Sobic001G413300 Sobic001G413300 Sobic001G388300--Sobic001G413300 Sobic003G208200 Sobic003G208200 Sobic001G388300--Sobic003G208200 Sobic004G176950 Sobic004G176950 Sobic001G388300--Sobic004G176950 Sobic003G351501 Sobic003G351501 Sobic001G388300--Sobic003G351501 Sobic002G033550 Sobic002G033550 Sobic001G388300--Sobic002G033550 Sobic010G268500 Sobic010G268500 Sobic001G388300--Sobic010G268500 Sobic003G161900 Sobic003G161900 Sobic001G388300--Sobic003G161900 Sobic002G413100 Sobic002G413100 Sobic001G388300--Sobic002G413100 Sobic007G199901 Sobic007G199901 Sobic002G245700--Sobic007G199901 Sobic004G169401 Sobic004G169401 Sobic002G245700--Sobic004G169401 Sobic002G245700--Sobic001G413300 Sobic002G245700--Sobic003G208200 Sobic004G320900 Sobic004G320900 Sobic002G245700--Sobic004G320900 Sobic002G245700--Sobic002G413100 Sobic003G053100 Sobic003G053100 Sobic002G245700--Sobic003G053100 Sobic003G117850 Sobic003G117850 Sobic002G245700--Sobic003G117850 Sobic002G245700--Sobic004G176950 Sobic001G413300--Sobic003G208200 Sobic001G413300--Sobic003G351501 Sobic003G169700 Sobic003G169700 Sobic001G413300--Sobic003G169700 Sobic007G085400 Sobic007G085400 Sobic001G413300--Sobic007G085400 Sobic001G413300--Sobic002G033550 Sobic001G224500 Sobic001G224500 Sobic001G413300--Sobic001G224500 Sobic001G373850 Sobic001G373850 Sobic001G413300--Sobic001G373850 Sobic001G413300--Sobic002G245700 Sobic001G413300--Sobic003G161900 Sobic003G208200--Sobic001G373850 Sobic003G208200--Sobic003G161900 Sobic003G208200--Sobic003G351501 Sobic001G261444 Sobic001G261444 Sobic003G208200--Sobic001G261444 Sobic003G208200--Sobic001G413300 Sobic001G202450 Sobic001G202450 Sobic003G208200--Sobic001G202450 Sobic001G093400 Sobic001G093400 Sobic003G208200--Sobic001G093400 Sobic008G100201 Sobic008G100201 Sobic003G208200--Sobic008G100201 Sobic004G115100 Sobic004G115100 Sobic003G208200--Sobic004G115100 Sobic004G176950--Sobic002G245700 Sobic004G176950--Sobic002G413100 Sobic001G148000 Sobic001G148000 Sobic004G176950--Sobic001G148000 Sobic004G176950--Sobic010G268500 Sobic004G176950--Sobic003G053100 Sobic004G176950--Sobic001G413300 Sobic004G176950--Sobic003G208200 Sobic004G176950--Sobic007G199901 Sobic004G176950--Sobic003G117850 Sobic003G351501--Sobic003G208200 Sobic003G351501--Sobic001G413300 Sobic004G134400 Sobic004G134400 Sobic003G351501--Sobic004G134400 Sobic003G351501--Sobic003G169700 Sobic003G351501--Sobic001G093400 Sobic009G079600 Sobic009G079600 Sobic003G351501--Sobic009G079600 Sobic004G274300 Sobic004G274300 Sobic003G351501--Sobic004G274300 Sobic003G351501--Sobic007G085400 Sobic009G260550 Sobic009G260550 Sobic003G351501--Sobic009G260550 Sobic001G137900 Sobic001G137900 Sobic002G033550--Sobic001G137900 Sobic002G033550--Sobic001G413300 Sobic004G199100 Sobic004G199100 Sobic002G033550--Sobic004G199100 Sobic006G279600 Sobic006G279600 Sobic002G033550--Sobic006G279600 Sobic003G143600 Sobic003G143600 Sobic002G033550--Sobic003G143600 Sobic002G033550--Sobic003G169700 Sobic002G033550--Sobic003G208200 Sobic009G106601 Sobic009G106601 Sobic002G033550--Sobic009G106601 Sobic005G019250 Sobic005G019250 Sobic002G033550--Sobic005G019250 Sobic001G022700 Sobic001G022700 Sobic010G268500--Sobic001G022700 Sobic010G268500--Sobic002G413100 Sobic005G104900 Sobic005G104900 Sobic010G268500--Sobic005G104900 Sobic005G139750 Sobic005G139750 Sobic010G268500--Sobic005G139750 Sobic010G268500--Sobic003G161900 Sobic004G077700 Sobic004G077700 Sobic010G268500--Sobic004G077700 Sobic005G093901 Sobic005G093901 Sobic010G268500--Sobic005G093901 Sobic007G145801 Sobic007G145801 Sobic010G268500--Sobic007G145801 Sobic003G173116 Sobic003G173116 Sobic010G268500--Sobic003G173116 Sobic002G401533 Sobic002G401533 Sobic003G161900--Sobic002G401533 Sobic003G161900--Sobic001G261444 Sobic006G107700 Sobic006G107700 Sobic003G161900--Sobic006G107700 Sobic003G161900--Sobic005G104900 Sobic003G161900--Sobic003G208200 Sobic009G077000 Sobic009G077000 Sobic003G161900--Sobic009G077000 Sobic001G475950 Sobic001G475950 Sobic003G161900--Sobic001G475950 Sobic003G056200 Sobic003G056200 Sobic003G161900--Sobic003G056200 SobicK032200 SobicK032200 Sobic003G161900--SobicK032200 Sobic002G413100--Sobic005G093901 Sobic002G413100--Sobic010G268500 Sobic002G413100--Sobic003G117850 Sobic002G413100--Sobic001G022700 Sobic009G148950 Sobic009G148950 Sobic002G413100--Sobic009G148950 Sobic003G172701 Sobic003G172701 Sobic002G413100--Sobic003G172701 Sobic002G270733 Sobic002G270733 Sobic002G413100--Sobic002G270733 Sobic006G057050 Sobic006G057050 Sobic002G413100--Sobic006G057050 Sobic007G109200 Sobic007G109200 Sobic002G413100--Sobic007G109200
Octagon: transcription factors


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