Gene annotation
Transcriptome id Sobic.001G434600.1
Synonym PK3AT, Sb01g040890, WAG1
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)" (PubMedID : 27586543)
AGC_PVPK_like_kin82y.8 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt C5WQW1
Pfam PF07714 PF00069
Panther DB PTHR24351 PTHR24351:SF82
NCBI CDD KOG0610; Putative serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT3G14370 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g14840.1 : AGC_PVPK_like_kin82y.8 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) Zm00025a024416 , Zm00025a005069 , Zm00025a013295 , Zm00025a040460 , Zm00025a001612
Brachypodium KQJ98900 , KQK22531
Barley HORVU4Hr1G062610.1 , HORVU5Hr1G072930.2 , HORVU5Hr1G072930.3 , HORVU5Hr1G072930.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G338200 MSP domain containing protein, putative, expressed -
2 Sobic.002G222500 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
3 Sobic.005G164900 expressed protein -
4 Sobic.003G012900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@receptor-like protein kinase, putative, expressed -
5 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
6 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
7 Sobic.008G114900 rhoGAP domain containing protein, expressed -
8 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
9 Sobic.001G320500 expressed protein -
10 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
11 Sobic.002G142200 expressed protein -
12 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
13 Sobic.002G113600 rhoGAP domain containing protein, expressed -
14 Sobic.001G230300 shugoshin-1, putative, expressed -
15 Sobic.004G313200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
16 Sobic.001G155700 expansin precursor, putative, expressed -
17 Sobic.006G219500 remorin family protein, putative, expressed -
18 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
19 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
20 Sobic.010G014700 expressed protein -


Gene co-expression network
sample Sobic001G434600 Sobic001G434600 Sobic002G338200 Sobic002G338200 Sobic001G434600--Sobic002G338200 Sobic002G222500 Sobic002G222500 Sobic001G434600--Sobic002G222500 Sobic005G164900 Sobic005G164900 Sobic001G434600--Sobic005G164900 Sobic003G012900 Sobic003G012900 Sobic001G434600--Sobic003G012900 Sobic004G257600 Sobic004G257600 Sobic001G434600--Sobic004G257600 Sobic008G125700 Sobic008G125700 Sobic001G434600--Sobic008G125700 Sobic008G114900 Sobic008G114900 Sobic001G434600--Sobic008G114900 Sobic009G146700 Sobic009G146700 Sobic001G434600--Sobic009G146700 Sobic001G320500 Sobic001G320500 Sobic001G434600--Sobic001G320500 Sobic002G338200--Sobic001G434600 Sobic003G201700 Sobic003G201700 Sobic002G338200--Sobic003G201700 Sobic001G379900 Sobic001G379900 Sobic002G338200--Sobic001G379900 Sobic003G406600 Sobic003G406600 Sobic002G338200--Sobic003G406600 Sobic003G009200 Sobic003G009200 Sobic002G338200--Sobic003G009200 Sobic004G305400 Sobic004G305400 Sobic002G338200--Sobic004G305400 Sobic001G467200 Sobic001G467200 Sobic002G338200--Sobic001G467200 Sobic002G229900 Sobic002G229900 Sobic002G338200--Sobic002G229900 Sobic004G352100 Sobic004G352100 Sobic002G338200--Sobic004G352100 Sobic001G091500 Sobic001G091500 Sobic002G222500--Sobic001G091500 Sobic002G222500--Sobic008G114900 Sobic010G269700 Sobic010G269700 Sobic002G222500--Sobic010G269700 Sobic003G387700 Sobic003G387700 Sobic002G222500--Sobic003G387700 Sobic010G241100 Sobic010G241100 Sobic002G222500--Sobic010G241100 Sobic003G444100 Sobic003G444100 Sobic002G222500--Sobic003G444100 Sobic004G313200 Sobic004G313200 Sobic002G222500--Sobic004G313200 Sobic006G219500 Sobic006G219500 Sobic002G222500--Sobic006G219500 Sobic003G032200 Sobic003G032200 Sobic002G222500--Sobic003G032200 Sobic002G113600 Sobic002G113600 Sobic005G164900--Sobic002G113600 Sobic004G339500 Sobic004G339500 Sobic005G164900--Sobic004G339500 Sobic005G164900--Sobic008G114900 Sobic003G008700 Sobic003G008700 Sobic005G164900--Sobic003G008700 Sobic006G215200 Sobic006G215200 Sobic005G164900--Sobic006G215200 Sobic001G230300 Sobic001G230300 Sobic005G164900--Sobic001G230300 Sobic005G164900--Sobic001G091500 Sobic008G006800 Sobic008G006800 Sobic005G164900--Sobic008G006800 Sobic001G540200 Sobic001G540200 Sobic005G164900--Sobic001G540200 Sobic003G012900--Sobic001G434600 Sobic003G429800 Sobic003G429800 Sobic003G012900--Sobic003G429800 Sobic006G168800 Sobic006G168800 Sobic003G012900--Sobic006G168800 Sobic006G058600 Sobic006G058600 Sobic003G012900--Sobic006G058600 Sobic003G012900--Sobic002G338200 Sobic001G001400 Sobic001G001400 Sobic003G012900--Sobic001G001400 Sobic006G036900 Sobic006G036900 Sobic003G012900--Sobic006G036900 Sobic008G044000 Sobic008G044000 Sobic003G012900--Sobic008G044000 Sobic001G089000 Sobic001G089000 Sobic003G012900--Sobic001G089000 Sobic003G260700 Sobic003G260700 Sobic004G257600--Sobic003G260700 Sobic004G257600--Sobic003G387700 Sobic001G398400 Sobic001G398400 Sobic004G257600--Sobic001G398400 Sobic001G177900 Sobic001G177900 Sobic004G257600--Sobic001G177900 Sobic004G198100 Sobic004G198100 Sobic004G257600--Sobic004G198100 Sobic001G170800 Sobic001G170800 Sobic004G257600--Sobic001G170800 Sobic004G257600--Sobic003G444100 Sobic007G168900 Sobic007G168900 Sobic004G257600--Sobic007G168900 Sobic004G257600--Sobic004G339500 Sobic010G119300 Sobic010G119300 Sobic008G125700--Sobic010G119300 Sobic008G125700--Sobic008G114900 Sobic003G102000 Sobic003G102000 Sobic008G125700--Sobic003G102000 Sobic008G125700--Sobic003G260700 Sobic008G125700--Sobic004G198100 Sobic008G125700--Sobic008G006800 Sobic002G313000 Sobic002G313000 Sobic008G125700--Sobic002G313000 Sobic008G125700--Sobic004G339500 Sobic005G199700 Sobic005G199700 Sobic008G125700--Sobic005G199700 Sobic008G114900--Sobic008G125700 Sobic008G114900--Sobic002G313000 Sobic001G155700 Sobic001G155700 Sobic008G114900--Sobic001G155700 Sobic008G114900--Sobic010G119300 Sobic008G114900--Sobic006G219500 Sobic002G319300 Sobic002G319300 Sobic008G114900--Sobic002G319300 Sobic008G114900--Sobic003G260700 Sobic001G493900 Sobic001G493900 Sobic008G114900--Sobic001G493900 Sobic008G114900--Sobic008G006800 Sobic009G146700--Sobic005G199700 Sobic003G338700 Sobic003G338700 Sobic009G146700--Sobic003G338700 Sobic002G363300 Sobic002G363300 Sobic009G146700--Sobic002G363300 Sobic010G014700 Sobic010G014700 Sobic009G146700--Sobic010G014700 Sobic003G010700 Sobic003G010700 Sobic009G146700--Sobic003G010700 Sobic001G286700 Sobic001G286700 Sobic009G146700--Sobic001G286700 Sobic007G180200 Sobic007G180200 Sobic009G146700--Sobic007G180200 Sobic006G107500 Sobic006G107500 Sobic009G146700--Sobic006G107500 Sobic010G014500 Sobic010G014500 Sobic009G146700--Sobic010G014500 Sobic003G278900 Sobic003G278900 Sobic001G320500--Sobic003G278900 Sobic001G108100 Sobic001G108100 Sobic001G320500--Sobic001G108100 Sobic004G215400 Sobic004G215400 Sobic001G320500--Sobic004G215400 Sobic006G068200 Sobic006G068200 Sobic001G320500--Sobic006G068200 Sobic006G140801 Sobic006G140801 Sobic001G320500--Sobic006G140801 Sobic001G320500--Sobic010G014700 Sobic001G320500--Sobic009G146700 Sobic010G087600 Sobic010G087600 Sobic001G320500--Sobic010G087600 Sobic001G320500--Sobic004G313200
Octagon: transcription factors


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