Gene annotation
Transcriptome id Sobic.001G478200.1
Synonym
Functional annotation -
UniProt A0A1B6QQ21
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G310500 chalcone synthase, putative, expressed -
2 Sobic.009G158700 - -
3 Sobic.010G113600 vignain precursor, putative, expressed -
4 Sobic.004G189301 - -
5 Sobic.010G074920 - -
6 Sobic.008G044500 zinc finger superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@expressed protein -
7 Sobic.001G101200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
8 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
9 Sobic.003G271500 expressed protein -
10 Sobic.008G140300 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
11 Sobic.001G133532 - -
12 Sobic.006G190700 - -
13 Sobic.004G333150 - -
14 Sobic.007G148000 heat shock protein DnaJ, putative, expressed -
15 Sobic.008G082200 osFTL7 FT-Like7 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
16 Sobic.009G108300 inhibitor I family protein, putative, expressed -
17 Sobic.006G038800 purple acid phosphatase 27("PubMedID : 26759170,PubMedID : 24597475")@nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
18 Sobic.001G348700 - -
19 Sobic.009G057000 basic helix-loop-helix, putative, expressed -
20 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -


Gene co-expression network
sample Sobic001G478200 Sobic001G478200 Sobic002G310500 Sobic002G310500 Sobic001G478200--Sobic002G310500 Sobic009G158700 Sobic009G158700 Sobic001G478200--Sobic009G158700 Sobic010G113600 Sobic010G113600 Sobic001G478200--Sobic010G113600 Sobic004G189301 Sobic004G189301 Sobic001G478200--Sobic004G189301 Sobic010G074920 Sobic010G074920 Sobic001G478200--Sobic010G074920 Sobic008G044500 Sobic008G044500 Sobic001G478200--Sobic008G044500 Sobic001G101200 Sobic001G101200 Sobic001G478200--Sobic001G101200 Sobic001G243600 Sobic001G243600 Sobic001G478200--Sobic001G243600 Sobic003G271500 Sobic003G271500 Sobic001G478200--Sobic003G271500 Sobic007G148000 Sobic007G148000 Sobic002G310500--Sobic007G148000 Sobic009G108300 Sobic009G108300 Sobic002G310500--Sobic009G108300 Sobic003G426100 Sobic003G426100 Sobic002G310500--Sobic003G426100 Sobic004G180301 Sobic004G180301 Sobic002G310500--Sobic004G180301 Sobic002G310500--Sobic010G113600 Sobic002G310500--Sobic001G478200 Sobic008G082200 Sobic008G082200 Sobic002G310500--Sobic008G082200 Sobic004G304300 Sobic004G304300 Sobic002G310500--Sobic004G304300 Sobic005G203100 Sobic005G203100 Sobic002G310500--Sobic005G203100 Sobic001G243500 Sobic001G243500 Sobic009G158700--Sobic001G243500 Sobic009G106800 Sobic009G106800 Sobic009G158700--Sobic009G106800 Sobic009G158700--Sobic008G044500 Sobic005G213200 Sobic005G213200 Sobic009G158700--Sobic005G213200 Sobic009G158700--Sobic001G243600 Sobic001G100700 Sobic001G100700 Sobic009G158700--Sobic001G100700 Sobic004G273400 Sobic004G273400 Sobic009G158700--Sobic004G273400 Sobic006G277550 Sobic006G277550 Sobic009G158700--Sobic006G277550 Sobic001G335600 Sobic001G335600 Sobic009G158700--Sobic001G335600 Sobic007G065900 Sobic007G065900 Sobic010G113600--Sobic007G065900 Sobic009G217700 Sobic009G217700 Sobic010G113600--Sobic009G217700 Sobic010G113600--Sobic003G271500 Sobic009G139700 Sobic009G139700 Sobic010G113600--Sobic009G139700 Sobic003G364000 Sobic003G364000 Sobic010G113600--Sobic003G364000 Sobic008G157800 Sobic008G157800 Sobic010G113600--Sobic008G157800 Sobic005G005600 Sobic005G005600 Sobic010G113600--Sobic005G005600 Sobic003G319700 Sobic003G319700 Sobic010G113600--Sobic003G319700 Sobic010G088700 Sobic010G088700 Sobic010G113600--Sobic010G088700 Sobic006G036500 Sobic006G036500 Sobic004G189301--Sobic006G036500 Sobic006G038800 Sobic006G038800 Sobic004G189301--Sobic006G038800 Sobic004G189301--Sobic008G044500 Sobic002G156900 Sobic002G156900 Sobic004G189301--Sobic002G156900 Sobic002G018500 Sobic002G018500 Sobic004G189301--Sobic002G018500 Sobic001G382266 Sobic001G382266 Sobic004G189301--Sobic001G382266 Sobic010G074920--Sobic002G310500 Sobic010G074920--Sobic001G478200 Sobic003G176350 Sobic003G176350 Sobic010G074920--Sobic003G176350 Sobic010G006000 Sobic010G006000 Sobic010G074920--Sobic010G006000 Sobic010G006100 Sobic010G006100 Sobic010G074920--Sobic010G006100 Sobic010G074920--Sobic010G113600 Sobic009G067450 Sobic009G067450 Sobic010G074920--Sobic009G067450 Sobic004G227800 Sobic004G227800 Sobic010G074920--Sobic004G227800 Sobic004G203301 Sobic004G203301 Sobic010G074920--Sobic004G203301 Sobic008G044500--Sobic006G277550 Sobic008G044500--Sobic009G158700 Sobic008G044500--Sobic004G189301 Sobic008G044500--Sobic006G038800 Sobic008G044500--Sobic001G243600 Sobic002G196100 Sobic002G196100 Sobic008G044500--Sobic002G196100 Sobic008G044500--Sobic005G213200 Sobic008G044500--Sobic006G036500 Sobic008G044500--Sobic001G243500 Sobic004G333150 Sobic004G333150 Sobic001G101200--Sobic004G333150 Sobic001G101200--Sobic001G243600 Sobic001G101200--Sobic003G271500 Sobic001G101200--Sobic004G273400 Sobic001G101200--Sobic001G100700 Sobic001G101200--Sobic008G082200 Sobic001G101200--Sobic001G478200 Sobic010G052700 Sobic010G052700 Sobic001G101200--Sobic010G052700 Sobic001G101200--Sobic002G310500 Sobic001G243600--Sobic004G273400 Sobic001G243600--Sobic005G213200 Sobic001G243600--Sobic001G243500 Sobic001G243600--Sobic001G100700 Sobic009G120000 Sobic009G120000 Sobic001G243600--Sobic009G120000 Sobic002G375400 Sobic002G375400 Sobic001G243600--Sobic002G375400 Sobic001G243600--Sobic009G106800 Sobic005G084600 Sobic005G084600 Sobic001G243600--Sobic005G084600 Sobic001G444400 Sobic001G444400 Sobic001G243600--Sobic001G444400 Sobic003G271500--Sobic009G217700 Sobic003G271500--Sobic010G113600 Sobic003G271500--Sobic010G052700 Sobic003G271500--Sobic003G364000 Sobic003G271500--Sobic009G139700 Sobic004G107700 Sobic004G107700 Sobic003G271500--Sobic004G107700 Sobic003G255200 Sobic003G255200 Sobic003G271500--Sobic003G255200 Sobic003G240600 Sobic003G240600 Sobic003G271500--Sobic003G240600 Sobic003G155600 Sobic003G155600 Sobic003G271500--Sobic003G155600
Octagon: transcription factors


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