Gene annotation
Transcriptome id Sobic.002G310500.1
Synonym CHS, ATCHS, Sb02g034020, TT4
Functional annotation chalcone synthase, putative, expressed
UniProt C5X9A7
Pfam PF08541 PF00195
Panther DB PTHR11877 PTHR11877:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process


Orthologs (automatic annotation)
TAIR AT5G13930 : Chalcone and stilbene synthase family protein
RAP-DB (Rice) LOC_Os07g31770.1 : chalcone synthase, putative, expressed
MaizeGDB (Corn) Zm00025a033582
Brachypodium KQK13828
Barley HORVU5Hr1G093950.3 , HORVU7Hr1G020920.4 , HORVU7Hr1G020920.5 , HORVU7Hr1G020920.6 , HORVU7Hr1G020920.7 , HORVU7Hr1G020920.1 , HORVU7Hr1G020920.2 , HORVU7Hr1G020920.3 , HORVU7Hr1G024480.2 , HORVU7Hr1G024480.1 , HORVU7Hr1G009190.1 , HORVU6Hr1G074060.1 , HORVU6Hr1G074060.2 , HORVU6Hr1G055000.2 , HORVU6Hr1G055000.3 , HORVU6Hr1G055000.1 , HORVU6Hr1G055000.4 , HORVU5Hr1G093950.4 , HORVU5Hr1G093950.1 , HORVU5Hr1G093950.2
Wheat TraesCS6A02G298400 , TraesCS6D02G278200 , TraesCS7D02G089300 , TraesCS4A02G437900 , TraesCS4B02G357100 , TraesCS6D02G018500 , TraesCS5A02G526900 , TraesCS7A02G093900 , TraesCS6B02G327900 , TraesCS6B02G022300 , TraesCS4D02G351300 , TraesCS6B02G022500 , TraesCS4A02G292500 , TraesCS6A02G015300 , TraesCS5A02G379500 , TraesCS5A02G379400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G148000 heat shock protein DnaJ, putative, expressed -
2 Sobic.009G108300 inhibitor I family protein, putative, expressed -
3 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.004G180301 - -
5 Sobic.010G113600 vignain precursor, putative, expressed -
6 Sobic.001G478200 - -
7 Sobic.008G082200 osFTL7 FT-Like7 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
8 Sobic.004G304300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
9 Sobic.005G203100 tropinone reductase 2, putative, expressed K08081: tropinone reductase I
10 Sobic.009G141000 KH domain containing protein, putative, expressed K14945: protein quaking
11 Sobic.010G006100 expressed protein -
12 Sobic.003G176350 - -
13 Sobic.007G066932 - -
14 Sobic.010G035700 expressed protein -
15 Sobic.003G240600 VQ domain containing protein, putative, expressed -
16 Sobic.008G140300 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
17 Sobic.004G333150 - -
18 Sobic.007G067350 - -
19 Sobic.007G135201 - -
20 Sobic.009G158700 - -


Gene co-expression network
sample Sobic002G310500 Sobic002G310500 Sobic007G148000 Sobic007G148000 Sobic002G310500--Sobic007G148000 Sobic009G108300 Sobic009G108300 Sobic002G310500--Sobic009G108300 Sobic003G426100 Sobic003G426100 Sobic002G310500--Sobic003G426100 Sobic004G180301 Sobic004G180301 Sobic002G310500--Sobic004G180301 Sobic010G113600 Sobic010G113600 Sobic002G310500--Sobic010G113600 Sobic001G478200 Sobic001G478200 Sobic002G310500--Sobic001G478200 Sobic008G082200 Sobic008G082200 Sobic002G310500--Sobic008G082200 Sobic004G304300 Sobic004G304300 Sobic002G310500--Sobic004G304300 Sobic005G203100 Sobic005G203100 Sobic002G310500--Sobic005G203100 Sobic007G148000--Sobic005G203100 Sobic003G240600 Sobic003G240600 Sobic007G148000--Sobic003G240600 Sobic007G148000--Sobic002G310500 Sobic007G135201 Sobic007G135201 Sobic007G148000--Sobic007G135201 Sobic003G088500 Sobic003G088500 Sobic007G148000--Sobic003G088500 Sobic007G148000--Sobic008G082200 Sobic007G148000--Sobic003G426100 Sobic001G243600 Sobic001G243600 Sobic007G148000--Sobic001G243600 Sobic010G239300 Sobic010G239300 Sobic007G148000--Sobic010G239300 Sobic009G108300--Sobic002G310500 Sobic009G108300--Sobic003G426100 Sobic007G066932 Sobic007G066932 Sobic009G108300--Sobic007G066932 Sobic010G035700 Sobic010G035700 Sobic009G108300--Sobic010G035700 Sobic007G067350 Sobic007G067350 Sobic009G108300--Sobic007G067350 Sobic008G140300 Sobic008G140300 Sobic009G108300--Sobic008G140300 Sobic009G108300--Sobic004G180301 Sobic003G176350 Sobic003G176350 Sobic009G108300--Sobic003G176350 Sobic009G108300--Sobic004G304300 Sobic003G426100--Sobic007G066932 Sobic002G195400 Sobic002G195400 Sobic003G426100--Sobic002G195400 Sobic003G426100--Sobic010G035700 Sobic010G102300 Sobic010G102300 Sobic003G426100--Sobic010G102300 Sobic003G426100--Sobic007G067350 Sobic003G426100--Sobic004G304300 Sobic001G319700 Sobic001G319700 Sobic003G426100--Sobic001G319700 Sobic003G426100--Sobic007G135201 Sobic007G067600 Sobic007G067600 Sobic003G426100--Sobic007G067600 Sobic004G180301--Sobic010G035700 Sobic004G180301--Sobic003G426100 Sobic004G180301--Sobic004G304300 Sobic007G015800 Sobic007G015800 Sobic004G180301--Sobic007G015800 Sobic004G180301--Sobic010G102300 Sobic004G180301--Sobic001G319700 Sobic004G180301--Sobic007G066932 Sobic010G102200 Sobic010G102200 Sobic004G180301--Sobic010G102200 Sobic004G180301--Sobic002G195400 Sobic007G065900 Sobic007G065900 Sobic010G113600--Sobic007G065900 Sobic009G217700 Sobic009G217700 Sobic010G113600--Sobic009G217700 Sobic003G271500 Sobic003G271500 Sobic010G113600--Sobic003G271500 Sobic009G139700 Sobic009G139700 Sobic010G113600--Sobic009G139700 Sobic003G364000 Sobic003G364000 Sobic010G113600--Sobic003G364000 Sobic008G157800 Sobic008G157800 Sobic010G113600--Sobic008G157800 Sobic005G005600 Sobic005G005600 Sobic010G113600--Sobic005G005600 Sobic003G319700 Sobic003G319700 Sobic010G113600--Sobic003G319700 Sobic010G088700 Sobic010G088700 Sobic010G113600--Sobic010G088700 Sobic001G478200--Sobic002G310500 Sobic009G158700 Sobic009G158700 Sobic001G478200--Sobic009G158700 Sobic001G478200--Sobic010G113600 Sobic004G189301 Sobic004G189301 Sobic001G478200--Sobic004G189301 Sobic010G074920 Sobic010G074920 Sobic001G478200--Sobic010G074920 Sobic008G044500 Sobic008G044500 Sobic001G478200--Sobic008G044500 Sobic001G101200 Sobic001G101200 Sobic001G478200--Sobic001G101200 Sobic001G478200--Sobic001G243600 Sobic001G478200--Sobic003G271500 Sobic008G082200--Sobic007G148000 Sobic010G023000 Sobic010G023000 Sobic008G082200--Sobic010G023000 Sobic008G082200--Sobic005G203100 Sobic002G368500 Sobic002G368500 Sobic008G082200--Sobic002G368500 Sobic008G082200--Sobic003G240600 Sobic002G325100 Sobic002G325100 Sobic008G082200--Sobic002G325100 Sobic008G060050 Sobic008G060050 Sobic008G082200--Sobic008G060050 Sobic008G082200--Sobic002G310500 Sobic010G052700 Sobic010G052700 Sobic008G082200--Sobic010G052700 Sobic004G304300--Sobic007G066932 Sobic004G304300--Sobic003G426100 Sobic004G304300--Sobic002G195400 Sobic003G426000 Sobic003G426000 Sobic004G304300--Sobic003G426000 Sobic004G304300--Sobic010G102300 Sobic004G304300--Sobic007G067350 Sobic004G304300--Sobic001G319700 Sobic005G101800 Sobic005G101800 Sobic004G304300--Sobic005G101800 Sobic009G128700 Sobic009G128700 Sobic004G304300--Sobic009G128700 Sobic005G203100--Sobic009G139700 Sobic005G203100--Sobic007G148000 Sobic004G333150 Sobic004G333150 Sobic005G203100--Sobic004G333150 Sobic005G203100--Sobic003G088500 Sobic003G087300 Sobic003G087300 Sobic005G203100--Sobic003G087300 Sobic001G503100 Sobic001G503100 Sobic005G203100--Sobic001G503100 Sobic005G203100--Sobic010G052700 Sobic007G005700 Sobic007G005700 Sobic005G203100--Sobic007G005700 Sobic002G125700 Sobic002G125700 Sobic005G203100--Sobic002G125700
Octagon: transcription factors


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