Gene annotation
Transcriptome id Sobic.010G006100.2
Synonym
Functional annotation expressed protein
UniProt A0A194YGL8
Pfam PF02362
Panther DB PTHR31140 PTHR31140:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT3G61970 : AP2/B3-like transcriptional factor family protein
RAP-DB (Rice) LOC_Os06g01860.1 : expressed protein
MaizeGDB (Corn) Zm00025a052255 , Zm00025a041171 , Zm00025a032333 , Zm00025a044450 , Zm00025a000289 , Zm00025a000288 , Zm00025a000286 , Zm00025a036522 , Zm00025a003162 , Zm00025a000291
Brachypodium KQK05045 , KQK00795 , KQJ84190 , KQK23932 , PNT61705 , PNT69241
Barley HORVU4Hr1G084950.1 , HORVU4Hr1G084950.2 , HORVU4Hr1G084950.3 , HORVU0Hr1G022200.1 , HORVU0Hr1G022200.2 , HORVU0Hr1G022200.3 , HORVU1Hr1G082670.3 , HORVU1Hr1G082670.1 , HORVU7Hr1G002230.1 , HORVU1Hr1G051780.2 , HORVU6Hr1G066190.2 , HORVU6Hr1G066190.1
Wheat TraesCS7D02G022400 , TraesCS1A02G200500 , TraesCS4A02G464900 , TraesCS7D02G020700 , TraesCS7A02G020800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G148000 heat shock protein DnaJ, putative, expressed -
2 Sobic.005G203100 tropinone reductase 2, putative, expressed K08081: tropinone reductase I
3 Sobic.003G176350 - -
4 Sobic.002G310500 chalcone synthase, putative, expressed -
5 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.009G016300 ZOS5-02 - C2H2 zinc finger protein, expressed -
7 Sobic.007G135201 - -
8 Sobic.007G066932 - -
9 Sobic.003G255500 expressed protein -
10 Sobic.004G176600 no apical meristem protein, putative, expressed -
11 Sobic.003G437200 sulfotransferase domain containing protein, expressed -
12 Sobic.003G430600 OsCML19 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
13 Sobic.001G403000 expressed protein -
14 Sobic.007G215900 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
15 Sobic.010G239300 oryzain beta chain precursor, putative, expressed -
16 Sobic.002G368500 B12D protein, putative, expressed -
17 Sobic.004G107700 expressed protein -
18 Sobic.003G011600 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed K00606: 3-methyl-2-oxobutanoate hydroxymethyltransferase
19 Sobic.003G240600 VQ domain containing protein, putative, expressed -
20 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -


Gene co-expression network
sample Sobic010G006100 Sobic010G006100 Sobic007G148000 Sobic007G148000 Sobic010G006100--Sobic007G148000 Sobic005G203100 Sobic005G203100 Sobic010G006100--Sobic005G203100 Sobic003G176350 Sobic003G176350 Sobic010G006100--Sobic003G176350 Sobic002G310500 Sobic002G310500 Sobic010G006100--Sobic002G310500 Sobic003G426100 Sobic003G426100 Sobic010G006100--Sobic003G426100 Sobic009G016300 Sobic009G016300 Sobic010G006100--Sobic009G016300 Sobic007G135201 Sobic007G135201 Sobic010G006100--Sobic007G135201 Sobic007G066932 Sobic007G066932 Sobic010G006100--Sobic007G066932 Sobic003G255500 Sobic003G255500 Sobic010G006100--Sobic003G255500 Sobic007G148000--Sobic005G203100 Sobic003G240600 Sobic003G240600 Sobic007G148000--Sobic003G240600 Sobic007G148000--Sobic002G310500 Sobic007G148000--Sobic007G135201 Sobic003G088500 Sobic003G088500 Sobic007G148000--Sobic003G088500 Sobic008G082200 Sobic008G082200 Sobic007G148000--Sobic008G082200 Sobic007G148000--Sobic003G426100 Sobic001G243600 Sobic001G243600 Sobic007G148000--Sobic001G243600 Sobic010G239300 Sobic010G239300 Sobic007G148000--Sobic010G239300 Sobic009G139700 Sobic009G139700 Sobic005G203100--Sobic009G139700 Sobic005G203100--Sobic007G148000 Sobic004G333150 Sobic004G333150 Sobic005G203100--Sobic004G333150 Sobic005G203100--Sobic003G088500 Sobic003G087300 Sobic003G087300 Sobic005G203100--Sobic003G087300 Sobic001G503100 Sobic001G503100 Sobic005G203100--Sobic001G503100 Sobic010G052700 Sobic010G052700 Sobic005G203100--Sobic010G052700 Sobic007G005700 Sobic007G005700 Sobic005G203100--Sobic007G005700 Sobic002G125700 Sobic002G125700 Sobic005G203100--Sobic002G125700 Sobic005G033900 Sobic005G033900 Sobic003G176350--Sobic005G033900 Sobic010G006000 Sobic010G006000 Sobic003G176350--Sobic010G006000 Sobic003G437200 Sobic003G437200 Sobic003G176350--Sobic003G437200 Sobic003G176350--Sobic007G066932 Sobic003G176350--Sobic003G426100 Sobic007G067350 Sobic007G067350 Sobic003G176350--Sobic007G067350 Sobic003G430600 Sobic003G430600 Sobic003G176350--Sobic003G430600 Sobic003G062600 Sobic003G062600 Sobic003G176350--Sobic003G062600 Sobic006G084600 Sobic006G084600 Sobic003G176350--Sobic006G084600 Sobic002G310500--Sobic007G148000 Sobic009G108300 Sobic009G108300 Sobic002G310500--Sobic009G108300 Sobic002G310500--Sobic003G426100 Sobic004G180301 Sobic004G180301 Sobic002G310500--Sobic004G180301 Sobic010G113600 Sobic010G113600 Sobic002G310500--Sobic010G113600 Sobic001G478200 Sobic001G478200 Sobic002G310500--Sobic001G478200 Sobic002G310500--Sobic008G082200 Sobic004G304300 Sobic004G304300 Sobic002G310500--Sobic004G304300 Sobic002G310500--Sobic005G203100 Sobic003G426100--Sobic007G066932 Sobic002G195400 Sobic002G195400 Sobic003G426100--Sobic002G195400 Sobic010G035700 Sobic010G035700 Sobic003G426100--Sobic010G035700 Sobic010G102300 Sobic010G102300 Sobic003G426100--Sobic010G102300 Sobic003G426100--Sobic007G067350 Sobic003G426100--Sobic004G304300 Sobic001G319700 Sobic001G319700 Sobic003G426100--Sobic001G319700 Sobic003G426100--Sobic007G135201 Sobic007G067600 Sobic007G067600 Sobic003G426100--Sobic007G067600 Sobic001G449600 Sobic001G449600 Sobic009G016300--Sobic001G449600 Sobic006G199800 Sobic006G199800 Sobic009G016300--Sobic006G199800 Sobic009G016300--Sobic003G255500 Sobic009G016300--Sobic003G062600 Sobic003G255200 Sobic003G255200 Sobic009G016300--Sobic003G255200 Sobic004G217800 Sobic004G217800 Sobic009G016300--Sobic004G217800 Sobic009G016300--Sobic003G437200 Sobic009G217700 Sobic009G217700 Sobic009G016300--Sobic009G217700 Sobic003G417800 Sobic003G417800 Sobic009G016300--Sobic003G417800 Sobic007G135201--Sobic003G426100 Sobic001G231600 Sobic001G231600 Sobic007G135201--Sobic001G231600 Sobic007G135201--Sobic007G066932 Sobic007G135201--Sobic007G067600 Sobic007G135201--Sobic002G195400 Sobic007G135201--Sobic007G067350 Sobic007G135201--Sobic010G102300 Sobic007G135201--Sobic010G035700 Sobic007G135201--Sobic006G084600 Sobic007G066932--Sobic007G067350 Sobic007G066932--Sobic003G426100 Sobic007G066932--Sobic002G195400 Sobic007G066932--Sobic010G102300 Sobic007G066932--Sobic007G067600 Sobic007G066932--Sobic004G304300 Sobic007G066932--Sobic001G319700 Sobic007G066932--Sobic006G084600 Sobic007G066932--Sobic007G135201 Sobic003G255500--Sobic001G503100 Sobic003G255500--Sobic003G255200 Sobic003G255500--Sobic006G199800 Sobic003G255500--Sobic001G449600 Sobic006G044100 Sobic006G044100 Sobic003G255500--Sobic006G044100 Sobic009G187200 Sobic009G187200 Sobic003G255500--Sobic009G187200 Sobic004G107700 Sobic004G107700 Sobic003G255500--Sobic004G107700 Sobic004G348400 Sobic004G348400 Sobic003G255500--Sobic004G348400 Sobic001G161500 Sobic001G161500 Sobic003G255500--Sobic001G161500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.