Gene annotation
Transcriptome id Sobic.001G495180.1
Synonym -
Functional annotation -
UniProt A0A1Z5SB76
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
2 Sobic.004G037000 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
3 Sobic.010G084600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
4 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
5 Sobic.002G139400 AP2 domain containing protein, expressed -
6 Sobic.004G115500 expressed protein -
7 Sobic.002G361100 similar to Glutathione transferase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.001G495148 - -
9 Sobic.008G187001 - K09422: transcription factor MYB, plant
10 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
12 Sobic.004G341000 OsFBX66 - F-box domain containing protein, expressed -
13 Sobic.007G155200 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
14 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
15 Sobic.004G127200 glycosyl hydrolases family 16, putative, expressed -
16 Sobic.009G043700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.003G307300 - -
18 Sobic.010G063033 - -
19 Sobic.009G144600 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.001G357100 ZOS9-11 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic001G495180 Sobic001G495180 Sobic002G184200 Sobic002G184200 Sobic001G495180--Sobic002G184200 Sobic004G037000 Sobic004G037000 Sobic001G495180--Sobic004G037000 Sobic010G084600 Sobic010G084600 Sobic001G495180--Sobic010G084600 Sobic009G224100 Sobic009G224100 Sobic001G495180--Sobic009G224100 Sobic002G139400 Sobic002G139400 Sobic001G495180--Sobic002G139400 Sobic004G115500 Sobic004G115500 Sobic001G495180--Sobic004G115500 Sobic002G361100 Sobic002G361100 Sobic001G495180--Sobic002G361100 Sobic001G495148 Sobic001G495148 Sobic001G495180--Sobic001G495148 Sobic008G187001 Sobic008G187001 Sobic001G495180--Sobic008G187001 Sobic002G184200--Sobic009G224100 Sobic002G184200--Sobic002G139400 Sobic004G243100 Sobic004G243100 Sobic002G184200--Sobic004G243100 Sobic004G221500 Sobic004G221500 Sobic002G184200--Sobic004G221500 Sobic007G067400 Sobic007G067400 Sobic002G184200--Sobic007G067400 Sobic010G084700 Sobic010G084700 Sobic002G184200--Sobic010G084700 Sobic007G155200 Sobic007G155200 Sobic002G184200--Sobic007G155200 Sobic007G155100 Sobic007G155100 Sobic002G184200--Sobic007G155100 Sobic001G423800 Sobic001G423800 Sobic002G184200--Sobic001G423800 Sobic004G037000--Sobic007G155200 Sobic004G037000--Sobic002G361100 Sobic004G037000--Sobic010G084600 Sobic004G037000--Sobic002G184200 Sobic004G037000--Sobic010G084700 Sobic004G037000--Sobic009G224100 Sobic004G037000--Sobic004G221500 Sobic006G207000 Sobic006G207000 Sobic004G037000--Sobic006G207000 Sobic010G196600 Sobic010G196600 Sobic004G037000--Sobic010G196600 Sobic010G084600--Sobic002G184200 Sobic003G307300 Sobic003G307300 Sobic010G084600--Sobic003G307300 Sobic006G084600 Sobic006G084600 Sobic010G084600--Sobic006G084600 Sobic010G084600--Sobic004G221500 Sobic010G084600--Sobic004G037000 Sobic010G084600--Sobic007G155200 Sobic010G084600--Sobic002G361100 Sobic010G084600--Sobic009G224100 Sobic001G365100 Sobic001G365100 Sobic010G084600--Sobic001G365100 Sobic009G224100--Sobic004G243100 Sobic009G224100--Sobic002G139400 Sobic009G224100--Sobic002G184200 Sobic009G224100--Sobic008G187001 Sobic009G224100--Sobic007G155200 Sobic009G224100--Sobic001G423800 Sobic002G388900 Sobic002G388900 Sobic009G224100--Sobic002G388900 Sobic001G192200 Sobic001G192200 Sobic009G224100--Sobic001G192200 Sobic001G330100 Sobic001G330100 Sobic009G224100--Sobic001G330100 Sobic002G139400--Sobic004G243100 Sobic002G139400--Sobic009G224100 Sobic002G139400--Sobic002G184200 Sobic002G139400--Sobic001G192200 Sobic001G231400 Sobic001G231400 Sobic002G139400--Sobic001G231400 Sobic002G251000 Sobic002G251000 Sobic002G139400--Sobic002G251000 Sobic003G282901 Sobic003G282901 Sobic002G139400--Sobic003G282901 Sobic001G018300 Sobic001G018300 Sobic002G139400--Sobic001G018300 Sobic002G139400--Sobic001G423800 Sobic001G357100 Sobic001G357100 Sobic004G115500--Sobic001G357100 Sobic007G169500 Sobic007G169500 Sobic004G115500--Sobic007G169500 Sobic008G054150 Sobic008G054150 Sobic004G115500--Sobic008G054150 Sobic009G009400 Sobic009G009400 Sobic004G115500--Sobic009G009400 Sobic001G343601 Sobic001G343601 Sobic004G115500--Sobic001G343601 Sobic009G043700 Sobic009G043700 Sobic004G115500--Sobic009G043700 Sobic004G115500--Sobic010G084600 Sobic004G341000 Sobic004G341000 Sobic004G115500--Sobic004G341000 Sobic004G115500--Sobic004G037000 Sobic009G061200 Sobic009G061200 Sobic002G361100--Sobic009G061200 Sobic001G319600 Sobic001G319600 Sobic002G361100--Sobic001G319600 Sobic001G387900 Sobic001G387900 Sobic002G361100--Sobic001G387900 Sobic003G078100 Sobic003G078100 Sobic002G361100--Sobic003G078100 Sobic002G361100--Sobic009G224100 Sobic002G361100--Sobic004G037000 Sobic002G361100--Sobic010G084600 Sobic001G108200 Sobic001G108200 Sobic002G361100--Sobic001G108200 Sobic004G216600 Sobic004G216600 Sobic002G361100--Sobic004G216600 Sobic001G319700 Sobic001G319700 Sobic001G495148--Sobic001G319700 Sobic010G102300 Sobic010G102300 Sobic001G495148--Sobic010G102300 Sobic001G495148--Sobic001G357100 Sobic001G495148--Sobic002G139400 Sobic001G495148--Sobic001G495180 Sobic001G317000 Sobic001G317000 Sobic001G495148--Sobic001G317000 Sobic008G068166 Sobic008G068166 Sobic001G495148--Sobic008G068166 Sobic001G495148--Sobic004G115500 Sobic001G495148--Sobic009G043700 Sobic008G187001--Sobic002G388900 Sobic001G256700 Sobic001G256700 Sobic008G187001--Sobic001G256700 Sobic007G036900 Sobic007G036900 Sobic008G187001--Sobic007G036900 Sobic008G187001--Sobic009G224100 Sobic004G219800 Sobic004G219800 Sobic008G187001--Sobic004G219800 Sobic009G032000 Sobic009G032000 Sobic008G187001--Sobic009G032000 Sobic008G187001--Sobic001G330100 Sobic009G122400 Sobic009G122400 Sobic008G187001--Sobic009G122400 Sobic004G352000 Sobic004G352000 Sobic008G187001--Sobic004G352000
Octagon: transcription factors


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