Gene annotation
Transcriptome id Sobic.002G024300.2
Synonym Sb02g002250, RLK
Functional annotation lectin-like receptor kinase, putative, expressed
UniProt A0A1W0W219
Pfam PF00139 PF00069
Panther DB PTHR27007 PTHR27007:SF41
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G53810 : Concanavalin A-like lectin protein kinase family protein
RAP-DB (Rice) LOC_Os07g03840.1 : lectin-like receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a045545 , Zm00025a055229 , Zm00025a006800 , Zm00025a006799 , Zm00025a048485 , Zm00025a034365
Brachypodium PNT61561 , KQK20955 , KQK13266 , PNT61549 , PNT61550
Barley HORVU6Hr1G025340.1 , HORVU1Hr1G037000.1 , HORVU1Hr1G037000.3 , HORVU1Hr1G037000.2 , HORVU1Hr1G037000.5 , HORVU1Hr1G037000.4 , HORVU5Hr1G104840.1 , HORVU5Hr1G104840.2 , HORVU6Hr1G025340.2 , HORVU6Hr1G025340.3 , HORVU6Hr1G025340.4 , HORVU6Hr1G025340.5
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.002G024300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G091100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 3, putative, expressed -
2 Sobic.006G164500 protein kinase domain containing protein, expressed -
3 Sobic.003G366700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@anthocyanidin 3-O-glucosyltransferase, putative, expressed -
4 Sobic.003G183000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed -
5 Sobic.002G249700 OsWAK80 - OsWAK receptor-like protein kinase, expressed -
6 Sobic.004G304550 - -
7 Sobic.006G233800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Transferase family protein (At)(PubMedID : 27208977)@transferase family protein, putative, expressed -
8 Sobic.001G535500 folylpolyglutamate synthase(PubMedID : 33924915)@folylpolyglutamate synthase, mitochondrial precursor, putative, expressed K01930: folylpolyglutamate synthase
9 Sobic.004G268600 nodulin, putative, expressed -
10 Sobic.003G358100 O-fucosyltransferase family protein(PubMedID : 26465154)@growth regulator related protein, putative, expressed -
11 Sobic.007G085900 - -
12 Sobic.006G272000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@csAtPR5, putative, expressed -
13 Sobic.003G421600 - -
14 Sobic.003G160300 - -
15 Sobic.008G140050 - -
16 Sobic.003G160433 - -
17 Sobic.004G282933 - -
18 Sobic.001G491800 expressed protein -
19 Sobic.002G180732 - -
20 Sobic.001G128000 expressed protein -


Gene co-expression network
sample Sobic002G024300 Sobic002G024300 Sobic010G091100 Sobic010G091100 Sobic002G024300--Sobic010G091100 Sobic006G164500 Sobic006G164500 Sobic002G024300--Sobic006G164500 Sobic003G366700 Sobic003G366700 Sobic002G024300--Sobic003G366700 Sobic003G183000 Sobic003G183000 Sobic002G024300--Sobic003G183000 Sobic002G249700 Sobic002G249700 Sobic002G024300--Sobic002G249700 Sobic004G304550 Sobic004G304550 Sobic002G024300--Sobic004G304550 Sobic006G233800 Sobic006G233800 Sobic002G024300--Sobic006G233800 Sobic001G535500 Sobic001G535500 Sobic002G024300--Sobic001G535500 Sobic004G268600 Sobic004G268600 Sobic002G024300--Sobic004G268600 Sobic009G111800 Sobic009G111800 Sobic010G091100--Sobic009G111800 Sobic007G149750 Sobic007G149750 Sobic010G091100--Sobic007G149750 Sobic002G025000 Sobic002G025000 Sobic010G091100--Sobic002G025000 Sobic005G030266 Sobic005G030266 Sobic010G091100--Sobic005G030266 Sobic005G068200 Sobic005G068200 Sobic010G091100--Sobic005G068200 Sobic001G249900 Sobic001G249900 Sobic010G091100--Sobic001G249900 Sobic004G234766 Sobic004G234766 Sobic010G091100--Sobic004G234766 Sobic006G093550 Sobic006G093550 Sobic010G091100--Sobic006G093550 Sobic006G130100 Sobic006G130100 Sobic010G091100--Sobic006G130100 Sobic003G358100 Sobic003G358100 Sobic006G164500--Sobic003G358100 Sobic006G164500--Sobic002G024300 Sobic003G097000 Sobic003G097000 Sobic006G164500--Sobic003G097000 Sobic006G164500--Sobic004G304550 Sobic006G272000 Sobic006G272000 Sobic006G164500--Sobic006G272000 Sobic006G164500--Sobic010G091100 Sobic006G164500--Sobic002G249700 Sobic002G224900 Sobic002G224900 Sobic006G164500--Sobic002G224900 Sobic006G164500--Sobic006G233800 Sobic003G366700--Sobic002G024300 Sobic004G157700 Sobic004G157700 Sobic003G366700--Sobic004G157700 Sobic003G366700--Sobic004G304550 Sobic003G366700--Sobic006G233800 Sobic003G366700--Sobic010G091100 Sobic001G319000 Sobic001G319000 Sobic003G366700--Sobic001G319000 Sobic001G321700 Sobic001G321700 Sobic003G366700--Sobic001G321700 Sobic009G097100 Sobic009G097100 Sobic003G366700--Sobic009G097100 Sobic003G366700--Sobic006G164500 Sobic004G091900 Sobic004G091900 Sobic003G183000--Sobic004G091900 Sobic003G050100 Sobic003G050100 Sobic003G183000--Sobic003G050100 Sobic003G330350 Sobic003G330350 Sobic003G183000--Sobic003G330350 Sobic001G270800 Sobic001G270800 Sobic003G183000--Sobic001G270800 Sobic004G186800 Sobic004G186800 Sobic003G183000--Sobic004G186800 Sobic010G193100 Sobic010G193100 Sobic003G183000--Sobic010G193100 Sobic008G007500 Sobic008G007500 Sobic003G183000--Sobic008G007500 Sobic002G087700 Sobic002G087700 Sobic003G183000--Sobic002G087700 Sobic003G375400 Sobic003G375400 Sobic003G183000--Sobic003G375400 Sobic004G252600 Sobic004G252600 Sobic002G249700--Sobic004G252600 Sobic008G171200 Sobic008G171200 Sobic002G249700--Sobic008G171200 Sobic001G476800 Sobic001G476800 Sobic002G249700--Sobic001G476800 Sobic004G207800 Sobic004G207800 Sobic002G249700--Sobic004G207800 Sobic010G175550 Sobic010G175550 Sobic002G249700--Sobic010G175550 Sobic007G113566 Sobic007G113566 Sobic002G249700--Sobic007G113566 Sobic001G331650 Sobic001G331650 Sobic002G249700--Sobic001G331650 Sobic002G159750 Sobic002G159750 Sobic002G249700--Sobic002G159750 Sobic003G286450 Sobic003G286450 Sobic002G249700--Sobic003G286450 Sobic004G304550--Sobic006G164500 Sobic004G304550--Sobic002G024300 Sobic001G148000 Sobic001G148000 Sobic004G304550--Sobic001G148000 Sobic002G413100 Sobic002G413100 Sobic004G304550--Sobic002G413100 Sobic004G304550--Sobic002G224900 Sobic005G093901 Sobic005G093901 Sobic004G304550--Sobic005G093901 Sobic004G269300 Sobic004G269300 Sobic004G304550--Sobic004G269300 Sobic004G304550--Sobic003G358100 Sobic010G268500 Sobic010G268500 Sobic004G304550--Sobic010G268500 Sobic002G373900 Sobic002G373900 Sobic006G233800--Sobic002G373900 Sobic003G249500 Sobic003G249500 Sobic006G233800--Sobic003G249500 Sobic005G013901 Sobic005G013901 Sobic006G233800--Sobic005G013901 Sobic006G233800--Sobic002G025000 Sobic009G074200 Sobic009G074200 Sobic006G233800--Sobic009G074200 Sobic006G233800--Sobic004G234766 Sobic007G201200 Sobic007G201200 Sobic006G233800--Sobic007G201200 Sobic006G233800--Sobic007G149750 Sobic003G169400 Sobic003G169400 Sobic006G233800--Sobic003G169400 Sobic001G217800 Sobic001G217800 Sobic001G535500--Sobic001G217800 Sobic005G101400 Sobic005G101400 Sobic001G535500--Sobic005G101400 Sobic009G104850 Sobic009G104850 Sobic001G535500--Sobic009G104850 Sobic004G272500 Sobic004G272500 Sobic001G535500--Sobic004G272500 Sobic005G167450 Sobic005G167450 Sobic001G535500--Sobic005G167450 Sobic003G160400 Sobic003G160400 Sobic001G535500--Sobic003G160400 Sobic004G104200 Sobic004G104200 Sobic001G535500--Sobic004G104200 Sobic005G167100 Sobic005G167100 Sobic001G535500--Sobic005G167100 Sobic003G119750 Sobic003G119750 Sobic001G535500--Sobic003G119750 Sobic003G337200 Sobic003G337200 Sobic004G268600--Sobic003G337200 Sobic001G128000 Sobic001G128000 Sobic004G268600--Sobic001G128000 Sobic002G180732 Sobic002G180732 Sobic004G268600--Sobic002G180732 Sobic004G268600--Sobic004G234766 Sobic003G160433 Sobic003G160433 Sobic004G268600--Sobic003G160433 Sobic005G163932 Sobic005G163932 Sobic004G268600--Sobic005G163932 Sobic010G107901 Sobic010G107901 Sobic004G268600--Sobic010G107901 Sobic008G024900 Sobic008G024900 Sobic004G268600--Sobic008G024900 Sobic004G268600--Sobic003G119750
Octagon: transcription factors


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