Gene annotation
Transcriptome id Sobic.002G055400.1,Sobic.002G055400.2
Synonym Sb02g004630,
Functional annotation Putative uncharacterized protein (PubMedID : 24655390)
Oryza sativa Indica Group (PubMedID : 27586543)
plant-specific domain TIGR01615 family protein, expressed
UniProt C5XB36 , A0A1W0W2J6
Pfam PF04720
Panther DB PTHR31579 PTHR31579:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22970 : Protein of unknown function (DUF506)
RAP-DB (Rice) LOC_Os03g58230.1 : plant-specific domain TIGR01615 family protein, expressed
MaizeGDB (Corn) Zm00025a045183 , Zm00025a000772 , Zm00025a008563 , Zm00025a016078
Brachypodium KQK12706
Barley HORVU5Hr1G105950.4 , HORVU5Hr1G105950.1 , HORVU5Hr1G105950.3 , HORVU5Hr1G105950.2
Wheat TraesCS5B02G442200 , TraesCS5D02G446400 , TraesCS5B02G442200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G131700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
2 Sobic.001G271500 expressed protein -
3 Sobic.006G115300 amino acid transporter, putative, expressed -
4 Sobic.010G245900 - -
5 Sobic.003G137900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
6 Sobic.009G097300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
7 Sobic.008G091614 - -
8 Sobic.004G219700 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.010G124800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase 7, putative, expressed -
10 Sobic.003G252400 drought induced 19 protein, putative, expressed -
11 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.001G352700 VQ domain containing protein, putative, expressed -
13 Sobic.003G251400 lectin-like receptor kinase 1, putative, expressed -
14 Sobic.003G397400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
15 Sobic.002G331450 - -
16 Sobic.004G226100 RIPER1 - Ripening-related family protein precursor, expressed -
17 Sobic.004G200800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@enzyme relate to secondary metabolic pathway(PubMedID : 25346182)@The B-phenyl ring of naringenin can be hydroxylated at the 3' positions to produce eriodictyol(PubMedID : 16943219)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase
18 Sobic.002G325600 ankyrin repeat family protein, putative, expressed -
19 Sobic.006G258800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
20 Sobic.003G083000 glycosyl hydrolase family 10 protein, putative, expressed -


Gene co-expression network
sample Sobic002G055400 Sobic002G055400 Sobic007G131700 Sobic007G131700 Sobic002G055400--Sobic007G131700 Sobic001G271500 Sobic001G271500 Sobic002G055400--Sobic001G271500 Sobic006G115300 Sobic006G115300 Sobic002G055400--Sobic006G115300 Sobic010G245900 Sobic010G245900 Sobic002G055400--Sobic010G245900 Sobic003G137900 Sobic003G137900 Sobic002G055400--Sobic003G137900 Sobic009G097300 Sobic009G097300 Sobic002G055400--Sobic009G097300 Sobic008G091614 Sobic008G091614 Sobic002G055400--Sobic008G091614 Sobic004G219700 Sobic004G219700 Sobic002G055400--Sobic004G219700 Sobic010G124800 Sobic010G124800 Sobic002G055400--Sobic010G124800 Sobic003G252400 Sobic003G252400 Sobic007G131700--Sobic003G252400 Sobic007G131700--Sobic006G115300 Sobic002G110200 Sobic002G110200 Sobic007G131700--Sobic002G110200 Sobic003G229000 Sobic003G229000 Sobic007G131700--Sobic003G229000 Sobic002G189000 Sobic002G189000 Sobic007G131700--Sobic002G189000 Sobic007G025800 Sobic007G025800 Sobic007G131700--Sobic007G025800 Sobic010G260300 Sobic010G260300 Sobic007G131700--Sobic010G260300 Sobic002G013900 Sobic002G013900 Sobic007G131700--Sobic002G013900 Sobic002G331450 Sobic002G331450 Sobic007G131700--Sobic002G331450 Sobic001G352700 Sobic001G352700 Sobic001G271500--Sobic001G352700 Sobic001G271500--Sobic007G131700 Sobic001G271500--Sobic006G115300 Sobic001G271500--Sobic003G137900 Sobic003G252300 Sobic003G252300 Sobic001G271500--Sobic003G252300 Sobic001G271500--Sobic009G097300 Sobic004G236550 Sobic004G236550 Sobic001G271500--Sobic004G236550 Sobic001G271500--Sobic004G219700 Sobic006G086100 Sobic006G086100 Sobic001G271500--Sobic006G086100 Sobic009G118600 Sobic009G118600 Sobic006G115300--Sobic009G118600 Sobic006G115300--Sobic007G131700 Sobic006G115300--Sobic003G252400 Sobic001G235500 Sobic001G235500 Sobic006G115300--Sobic001G235500 Sobic006G115300--Sobic003G252300 Sobic006G115300--Sobic004G236550 Sobic003G272400 Sobic003G272400 Sobic006G115300--Sobic003G272400 Sobic001G521500 Sobic001G521500 Sobic006G115300--Sobic001G521500 Sobic003G126300 Sobic003G126300 Sobic006G115300--Sobic003G126300 Sobic003G083000 Sobic003G083000 Sobic010G245900--Sobic003G083000 Sobic003G397400 Sobic003G397400 Sobic010G245900--Sobic003G397400 Sobic007G169600 Sobic007G169600 Sobic010G245900--Sobic007G169600 Sobic007G073750 Sobic007G073750 Sobic010G245900--Sobic007G073750 Sobic007G143100 Sobic007G143100 Sobic010G245900--Sobic007G143100 Sobic005G016900 Sobic005G016900 Sobic010G245900--Sobic005G016900 Sobic007G143200 Sobic007G143200 Sobic010G245900--Sobic007G143200 Sobic009G076700 Sobic009G076700 Sobic010G245900--Sobic009G076700 Sobic010G245900--Sobic004G219700 Sobic003G137900--Sobic003G397400 Sobic003G137900--Sobic007G073750 Sobic003G137900--Sobic005G016900 Sobic003G137900--Sobic009G097300 Sobic008G052500 Sobic008G052500 Sobic003G137900--Sobic008G052500 Sobic002G325600 Sobic002G325600 Sobic003G137900--Sobic002G325600 Sobic003G137900--Sobic007G143100 Sobic003G137900--Sobic007G143200 Sobic003G137900--Sobic009G076700 Sobic009G097300--Sobic003G137900 Sobic005G215766 Sobic005G215766 Sobic009G097300--Sobic005G215766 Sobic009G097300--Sobic003G397400 Sobic006G272700 Sobic006G272700 Sobic009G097300--Sobic006G272700 Sobic003G281900 Sobic003G281900 Sobic009G097300--Sobic003G281900 Sobic003G064300 Sobic003G064300 Sobic009G097300--Sobic003G064300 Sobic009G097300--Sobic009G076700 Sobic009G097300--Sobic007G073750 Sobic009G097300--Sobic007G143200 Sobic001G247550 Sobic001G247550 Sobic008G091614--Sobic001G247550 Sobic008G048900 Sobic008G048900 Sobic008G091614--Sobic008G048900 Sobic004G200800 Sobic004G200800 Sobic008G091614--Sobic004G200800 Sobic003G181201 Sobic003G181201 Sobic008G091614--Sobic003G181201 Sobic008G091614--Sobic002G055400 Sobic010G057200 Sobic010G057200 Sobic008G091614--Sobic010G057200 Sobic002G011700 Sobic002G011700 Sobic008G091614--Sobic002G011700 Sobic004G219700--Sobic010G245900 Sobic004G219700--Sobic003G397400 Sobic004G219700--Sobic007G073750 Sobic004G219700--Sobic003G137900 Sobic004G219700--Sobic006G272700 Sobic010G253500 Sobic010G253500 Sobic004G219700--Sobic010G253500 Sobic001G210250 Sobic001G210250 Sobic004G219700--Sobic001G210250 Sobic004G219700--Sobic003G083000 Sobic004G219700--Sobic005G016900 Sobic010G124800--Sobic010G245900 Sobic010G124800--Sobic003G397400 Sobic010G124800--Sobic003G137900 Sobic009G064400 Sobic009G064400 Sobic010G124800--Sobic009G064400 Sobic010G124800--Sobic003G252400 Sobic010G238400 Sobic010G238400 Sobic010G124800--Sobic010G238400 Sobic010G124800--Sobic007G073750 Sobic010G124800--Sobic007G143100 Sobic010G124800--Sobic005G016900
Octagon: transcription factors


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