Gene annotation
Transcriptome id Sobic.002G083700.1
Synonym
Functional annotation -
UniProt A0A1B6Q9Z5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G203000 thylakoid lumenal protein, putative, expressed -
2 Sobic.003G328200 thylakoid lumenal 20 kDa protein, putative, expressed -
3 Sobic.004G234200 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
4 Sobic.008G051000 magnesium-chelatase subunit chlI, chloroplast precursor, putative, expressed K03405: chlI, magnesium chelatase subunit I
5 Sobic.009G091800 -(PubMedID : 29017446)@PTAC16, putative, expressed -
6 Sobic.004G193400 photosystem II 5 kDa protein, chloroplast precursor, putative, expressed -
7 Sobic.004G114800 expressed protein -
8 Sobic.004G238500 Geranylgeranyl reductase (Os)(PubMedID : 27208977)@FAD binding domain containing protein, expressed K10960: chlP, geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase
9 Sobic.003G300500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
10 Sobic.002G288300 Chorophyll a/b binding protein 1(PubMedID : 26186930)@chlorophyll A-B binding protein, putative, expressed K08912: light-harvesting complex II chlorophyll a/b binding protein 1
11 Sobic.004G317900 expressed protein -
12 Sobic.008G112300 -(PubMedID : 29017446)@-(PubMedID : 26976818)@citrate transporter, putative, expressed -
13 Sobic.007G116950 - -
14 Sobic.001G323801 - -
15 Sobic.001G372600 DVR, putative, expressed K19073: divinyl chlorophyllide a 8-vinyl-reductase
16 Sobic.007G185100 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
17 Sobic.010G255600 thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative, expressed -
18 Sobic.004G019300 terpene synthase, putative, expressed K15086: (3S)-linalool synthase
19 Sobic.003G150600 pectinacetylesterase domain containing protein, expressed -
20 Sobic.002G328900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -


Gene co-expression network
sample Sobic002G083700 Sobic002G083700 Sobic001G203000 Sobic001G203000 Sobic002G083700--Sobic001G203000 Sobic003G328200 Sobic003G328200 Sobic002G083700--Sobic003G328200 Sobic004G234200 Sobic004G234200 Sobic002G083700--Sobic004G234200 Sobic008G051000 Sobic008G051000 Sobic002G083700--Sobic008G051000 Sobic009G091800 Sobic009G091800 Sobic002G083700--Sobic009G091800 Sobic004G193400 Sobic004G193400 Sobic002G083700--Sobic004G193400 Sobic004G114800 Sobic004G114800 Sobic002G083700--Sobic004G114800 Sobic004G238500 Sobic004G238500 Sobic002G083700--Sobic004G238500 Sobic003G300500 Sobic003G300500 Sobic002G083700--Sobic003G300500 Sobic001G203000--Sobic008G051000 Sobic001G203000--Sobic004G114800 Sobic007G116950 Sobic007G116950 Sobic001G203000--Sobic007G116950 Sobic004G054500 Sobic004G054500 Sobic001G203000--Sobic004G054500 Sobic010G255600 Sobic010G255600 Sobic001G203000--Sobic010G255600 Sobic001G203000--Sobic004G234200 Sobic001G382100 Sobic001G382100 Sobic001G203000--Sobic001G382100 Sobic001G203000--Sobic009G091800 Sobic001G203000--Sobic004G238500 Sobic001G527100 Sobic001G527100 Sobic003G328200--Sobic001G527100 Sobic001G040000 Sobic001G040000 Sobic003G328200--Sobic001G040000 Sobic004G317900 Sobic004G317900 Sobic003G328200--Sobic004G317900 Sobic003G246400 Sobic003G246400 Sobic003G328200--Sobic003G246400 Sobic001G240000 Sobic001G240000 Sobic003G328200--Sobic001G240000 Sobic003G295800 Sobic003G295800 Sobic003G328200--Sobic003G295800 Sobic004G116100 Sobic004G116100 Sobic003G328200--Sobic004G116100 Sobic004G311100 Sobic004G311100 Sobic003G328200--Sobic004G311100 Sobic003G386300 Sobic003G386300 Sobic003G328200--Sobic003G386300 Sobic004G234200--Sobic009G091800 Sobic010G022100 Sobic010G022100 Sobic004G234200--Sobic010G022100 Sobic002G297300 Sobic002G297300 Sobic004G234200--Sobic002G297300 Sobic004G234200--Sobic004G193400 Sobic002G288300 Sobic002G288300 Sobic004G234200--Sobic002G288300 Sobic004G234200--Sobic008G051000 Sobic002G414400 Sobic002G414400 Sobic004G234200--Sobic002G414400 Sobic010G000500 Sobic010G000500 Sobic004G234200--Sobic010G000500 Sobic004G234200--Sobic004G114800 Sobic008G051000--Sobic009G091800 Sobic008G051000--Sobic004G238500 Sobic008G051000--Sobic007G116950 Sobic008G051000--Sobic001G203000 Sobic003G132100 Sobic003G132100 Sobic008G051000--Sobic003G132100 Sobic006G264201 Sobic006G264201 Sobic008G051000--Sobic006G264201 Sobic009G091850 Sobic009G091850 Sobic008G051000--Sobic009G091850 Sobic008G051000--Sobic004G234200 Sobic008G051000--Sobic002G297300 Sobic009G091800--Sobic008G051000 Sobic009G091800--Sobic002G288300 Sobic009G091800--Sobic004G234200 Sobic009G091800--Sobic002G297300 Sobic009G091800--Sobic010G022100 Sobic009G091800--Sobic006G264201 Sobic009G091800--Sobic004G238500 Sobic009G091800--Sobic010G000500 Sobic009G091800--Sobic007G116950 Sobic004G193400--Sobic004G234200 Sobic004G193400--Sobic002G414400 Sobic004G193400--Sobic002G297300 Sobic007G023300 Sobic007G023300 Sobic004G193400--Sobic007G023300 Sobic004G193400--Sobic009G091800 Sobic004G193400--Sobic002G288300 Sobic004G193400--Sobic010G022100 Sobic008G117400 Sobic008G117400 Sobic004G193400--Sobic008G117400 Sobic002G030200 Sobic002G030200 Sobic004G193400--Sobic002G030200 Sobic004G114800--Sobic001G203000 Sobic004G114800--Sobic004G234200 Sobic006G100900 Sobic006G100900 Sobic004G114800--Sobic006G100900 Sobic004G114800--Sobic008G051000 Sobic004G114800--Sobic009G091800 Sobic004G114800--Sobic007G116950 Sobic004G114800--Sobic001G382100 Sobic002G328900 Sobic002G328900 Sobic004G114800--Sobic002G328900 Sobic004G114800--Sobic004G238500 Sobic004G238500--Sobic006G264201 Sobic004G238500--Sobic008G051000 Sobic004G238500--Sobic002G297300 Sobic002G329600 Sobic002G329600 Sobic004G238500--Sobic002G329600 Sobic004G238500--Sobic009G091800 Sobic004G238500--Sobic007G116950 Sobic004G238500--Sobic003G132100 Sobic004G238500--Sobic001G382100 Sobic007G029300 Sobic007G029300 Sobic004G238500--Sobic007G029300 Sobic003G300500--Sobic002G328900 Sobic002G351000 Sobic002G351000 Sobic003G300500--Sobic002G351000 Sobic003G300500--Sobic003G328200 Sobic003G300500--Sobic004G317900 Sobic003G300500--Sobic004G193400 Sobic003G300500--Sobic004G234200 Sobic003G300500--Sobic004G114800 Sobic001G017000 Sobic001G017000 Sobic003G300500--Sobic001G017000 Sobic003G300500--Sobic003G295800
Octagon: transcription factors


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