Gene annotation
Transcriptome id Sobic.002G328900.2,Sobic.002G328900.1
Synonym CRK10, RLK4, Sb02g035540
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt A0A1W0W6S8 , A0A1W0W6W2
Pfam PF01657 PF00069
Panther DB PTHR27002 PTHR27002:SF130
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G23180 : cysteine-rich RLK (RECEPTOR-like protein kinase) 10
RAP-DB (Rice) LOC_Os07g35310.1 : TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a014848 , Zm00025a048290 , Zm00025a015125
Brachypodium PNT74978 , KQK15886
Barley HORVU2Hr1G044520.13 , HORVU2Hr1G044520.12 , HORVU2Hr1G044520.11 , HORVU2Hr1G044520.17 , HORVU2Hr1G044520.16 , HORVU2Hr1G044520.15 , HORVU2Hr1G044520.14 , HORVU2Hr1G044520.19 , HORVU2Hr1G044520.18 , HORVU1Hr1G092250.20 , HORVU1Hr1G092250.21 , HORVU1Hr1G092250.22 , HORVU1Hr1G092250.23 , HORVU1Hr1G092250.24 , HORVU1Hr1G092250.25 , HORVU1Hr1G092250.27 , HORVU2Hr1G044600.6 , HORVU2Hr1G044600.7 , HORVU2Hr1G044600.4 , HORVU2Hr1G044600.5 , HORVU2Hr1G044600.2 , HORVU2Hr1G044600.3 , HORVU2Hr1G044600.1 , HORVU2Hr1G044600.8 , HORVU2Hr1G044600.9 , HORVU1Hr1G092300.11 , HORVU1Hr1G092300.10 , HORVU5Hr1G084860.19 , HORVU5Hr1G084860.18 , HORVU5Hr1G084860.15 , HORVU5Hr1G084860.14 , HORVU5Hr1G084860.16 , HORVU5Hr1G084860.13 , HORVU5Hr1G084860.12 , HORVU5Hr1G084860.9 , HORVU5Hr1G084860.8 , HORVU5Hr1G084860.1 , HORVU5Hr1G084860.3 , HORVU5Hr1G084860.2 , HORVU5Hr1G084860.5 , HORVU5Hr1G084860.7 , HORVU5Hr1G084860.6 , HORVU1Hr1G092300.9 , HORVU1Hr1G092300.8 , HORVU1Hr1G092300.3 , HORVU1Hr1G092300.2 , HORVU1Hr1G092300.1 , HORVU1Hr1G092300.7 , HORVU1Hr1G092300.6 , HORVU1Hr1G092300.5 , HORVU1Hr1G092300.4 , HORVU2Hr1G044520.1 , HORVU2Hr1G044520.6 , HORVU2Hr1G044520.5 , HORVU2Hr1G044520.4 , HORVU2Hr1G044520.9 , HORVU2Hr1G044600.18 , HORVU2Hr1G044600.19 , HORVU2Hr1G044600.14 , HORVU2Hr1G044600.15 , HORVU2Hr1G044600.16 , HORVU2Hr1G044600.17 , HORVU2Hr1G044600.10 , HORVU2Hr1G044600.11 , HORVU2Hr1G044600.12 , HORVU2Hr1G044600.13 , HORVU2Hr1G044520.3 , HORVU2Hr1G044520.2 , HORVU5Hr1G084880.7 , HORVU5Hr1G084880.6 , HORVU5Hr1G084880.5 , HORVU5Hr1G084880.4 , HORVU5Hr1G084880.3 , HORVU5Hr1G084880.2 , HORVU5Hr1G084880.1 , HORVU5Hr1G084880.9 , HORVU5Hr1G084880.8 , HORVU1Hr1G092250.15 , HORVU1Hr1G092250.14 , HORVU1Hr1G092250.17 , HORVU1Hr1G092250.16 , HORVU1Hr1G092250.10 , HORVU1Hr1G092250.19 , HORVU1Hr1G092250.18 , HORVU2Hr1G044520.28 , HORVU2Hr1G044520.22 , HORVU2Hr1G044520.23 , HORVU2Hr1G044520.20 , HORVU2Hr1G044520.21 , HORVU2Hr1G044520.27 , HORVU2Hr1G044520.24 , HORVU2Hr1G044520.25 , HORVU5Hr1G084880.11 , HORVU5Hr1G084880.10 , HORVU1Hr1G092250.1 , HORVU1Hr1G092250.3 , HORVU1Hr1G092250.5 , HORVU1Hr1G092250.4 , HORVU1Hr1G092250.6 , HORVU1Hr1G092250.9 , HORVU1Hr1G092250.8 , HORVU2Hr1G044600.20
Wheat TraesCS2B02G241700 , TraesCS1B02G454100 , TraesCS1B02G454600 , TraesCS3D02G108500 , TraesCS1D02G431100 , TraesCS5A02G338300 , TraesCS5A02G338200 , TraesCS5A02G338200 , TraesCS6D02G013600 , TraesCS6D02G013600 , TraesCS6D02G013600 , TraesCS2A02G216400 , TraesCS2B02G241500 , TraesCS2D02G222000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G114800 expressed protein -
2 Sobic.003G300500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
3 Sobic.004G193400 photosystem II 5 kDa protein, chloroplast precursor, putative, expressed -
4 Sobic.004G105800 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.004G234200 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
6 Sobic.001G017000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal protein S6, putative, expressed K02990: RP-S6, MRPS6, small subunit ribosomal protein S6
7 Sobic.008G112300 -(PubMedID : 29017446)@-(PubMedID : 26976818)@citrate transporter, putative, expressed -
8 Sobic.004G317900 expressed protein -
9 Sobic.006G100900 cytokinin-O-glucosyltransferase 2, putative, expressed -
10 Sobic.009G091800 -(PubMedID : 29017446)@PTAC16, putative, expressed -
11 Sobic.002G351000 fasciclin domain containing protein, expressed -
12 Sobic.001G203000 thylakoid lumenal protein, putative, expressed -
13 Sobic.002G414400 -(PubMedID : 29017446)@ultraviolet-B-repressible protein, putative, expressed -
14 Sobic.007G116950 - -
15 Sobic.002G297300 expressed protein -
16 Sobic.003G096100 auxin-induced protein 5NG4, putative, expressed -
17 Sobic.002G383400 Protein oxidoreductase (Os)(PubMedID : 27208977)@amine oxidase family protein, putative, expressed -
18 Sobic.003G328200 thylakoid lumenal 20 kDa protein, putative, expressed -
19 Sobic.003G246400 ribosomal protein L7/L12 C-terminal domain containing protein, expressed K02935: RP-L7, MRPL12, large subunit ribosomal protein L7/L12
20 Sobic.001G206200 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed K00218: protochlorophyllide reductase


Gene co-expression network
sample Sobic002G328900 Sobic002G328900 Sobic004G114800 Sobic004G114800 Sobic002G328900--Sobic004G114800 Sobic003G300500 Sobic003G300500 Sobic002G328900--Sobic003G300500 Sobic004G193400 Sobic004G193400 Sobic002G328900--Sobic004G193400 Sobic004G105800 Sobic004G105800 Sobic002G328900--Sobic004G105800 Sobic004G234200 Sobic004G234200 Sobic002G328900--Sobic004G234200 Sobic001G017000 Sobic001G017000 Sobic002G328900--Sobic001G017000 Sobic008G112300 Sobic008G112300 Sobic002G328900--Sobic008G112300 Sobic004G317900 Sobic004G317900 Sobic002G328900--Sobic004G317900 Sobic006G100900 Sobic006G100900 Sobic002G328900--Sobic006G100900 Sobic001G203000 Sobic001G203000 Sobic004G114800--Sobic001G203000 Sobic004G114800--Sobic004G234200 Sobic004G114800--Sobic006G100900 Sobic008G051000 Sobic008G051000 Sobic004G114800--Sobic008G051000 Sobic009G091800 Sobic009G091800 Sobic004G114800--Sobic009G091800 Sobic007G116950 Sobic007G116950 Sobic004G114800--Sobic007G116950 Sobic001G382100 Sobic001G382100 Sobic004G114800--Sobic001G382100 Sobic004G114800--Sobic002G328900 Sobic004G238500 Sobic004G238500 Sobic004G114800--Sobic004G238500 Sobic003G300500--Sobic002G328900 Sobic002G351000 Sobic002G351000 Sobic003G300500--Sobic002G351000 Sobic003G328200 Sobic003G328200 Sobic003G300500--Sobic003G328200 Sobic003G300500--Sobic004G317900 Sobic003G300500--Sobic004G193400 Sobic003G300500--Sobic004G234200 Sobic003G300500--Sobic004G114800 Sobic003G300500--Sobic001G017000 Sobic003G295800 Sobic003G295800 Sobic003G300500--Sobic003G295800 Sobic004G193400--Sobic004G234200 Sobic002G414400 Sobic002G414400 Sobic004G193400--Sobic002G414400 Sobic002G297300 Sobic002G297300 Sobic004G193400--Sobic002G297300 Sobic007G023300 Sobic007G023300 Sobic004G193400--Sobic007G023300 Sobic004G193400--Sobic009G091800 Sobic002G288300 Sobic002G288300 Sobic004G193400--Sobic002G288300 Sobic010G022100 Sobic010G022100 Sobic004G193400--Sobic010G022100 Sobic008G117400 Sobic008G117400 Sobic004G193400--Sobic008G117400 Sobic002G030200 Sobic002G030200 Sobic004G193400--Sobic002G030200 Sobic001G394250 Sobic001G394250 Sobic004G105800--Sobic001G394250 Sobic003G096100 Sobic003G096100 Sobic004G105800--Sobic003G096100 Sobic004G105800--Sobic002G328900 Sobic005G110436 Sobic005G110436 Sobic004G105800--Sobic005G110436 Sobic001G003600 Sobic001G003600 Sobic004G105800--Sobic001G003600 Sobic002G020000 Sobic002G020000 Sobic004G105800--Sobic002G020000 Sobic001G519400 Sobic001G519400 Sobic004G105800--Sobic001G519400 Sobic004G105800--Sobic002G351000 Sobic003G123700 Sobic003G123700 Sobic004G105800--Sobic003G123700 Sobic004G234200--Sobic009G091800 Sobic004G234200--Sobic010G022100 Sobic004G234200--Sobic002G297300 Sobic004G234200--Sobic004G193400 Sobic004G234200--Sobic002G288300 Sobic004G234200--Sobic008G051000 Sobic004G234200--Sobic002G414400 Sobic010G000500 Sobic010G000500 Sobic004G234200--Sobic010G000500 Sobic004G234200--Sobic004G114800 Sobic001G017000--Sobic003G295800 Sobic004G076000 Sobic004G076000 Sobic001G017000--Sobic004G076000 Sobic001G017000--Sobic004G317900 Sobic001G323801 Sobic001G323801 Sobic001G017000--Sobic001G323801 Sobic001G027600 Sobic001G027600 Sobic001G017000--Sobic001G027600 Sobic006G280050 Sobic006G280050 Sobic001G017000--Sobic006G280050 Sobic003G246400 Sobic003G246400 Sobic001G017000--Sobic003G246400 Sobic001G017000--Sobic003G328200 Sobic004G191200 Sobic004G191200 Sobic001G017000--Sobic004G191200 Sobic004G311100 Sobic004G311100 Sobic008G112300--Sobic004G311100 Sobic008G112300--Sobic003G328200 Sobic008G112300--Sobic009G091800 Sobic001G527100 Sobic001G527100 Sobic008G112300--Sobic001G527100 Sobic007G143700 Sobic007G143700 Sobic008G112300--Sobic007G143700 Sobic002G297900 Sobic002G297900 Sobic008G112300--Sobic002G297900 Sobic004G116100 Sobic004G116100 Sobic008G112300--Sobic004G116100 Sobic008G112300--Sobic004G317900 Sobic004G335800 Sobic004G335800 Sobic008G112300--Sobic004G335800 Sobic004G317900--Sobic003G246400 Sobic007G185100 Sobic007G185100 Sobic004G317900--Sobic007G185100 Sobic004G317900--Sobic003G295800 Sobic010G233800 Sobic010G233800 Sobic004G317900--Sobic010G233800 Sobic004G317900--Sobic001G027600 Sobic001G453300 Sobic001G453300 Sobic004G317900--Sobic001G453300 Sobic004G317900--Sobic003G328200 Sobic004G317900--Sobic001G017000 Sobic004G054500 Sobic004G054500 Sobic004G317900--Sobic004G054500 Sobic006G100900--Sobic004G114800 Sobic006G100900--Sobic001G203000 Sobic006G100900--Sobic001G382100 Sobic006G100900--Sobic004G234200 Sobic006G100900--Sobic008G051000 Sobic006G100900--Sobic009G091800 Sobic006G100900--Sobic004G238500 Sobic006G100900--Sobic007G116950 Sobic006G100900--Sobic002G297300
Octagon: transcription factors


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