Gene annotation
Transcriptome id Sobic.002G108700.1
Synonym Sb02g009250
Functional annotation GRF zinc finger family protein, expressed
UniProt A0A1W0W386
Pfam -
Panther DB PTHR33248 PTHR33248:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g41640.1 : GRF zinc finger family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G206800 - -
2 Sobic.003G340350 - -
3 Sobic.002G052000 early light-induced protein, chloroplast precursor, putative, expressed -
4 Sobic.007G163433 - -
5 Sobic.006G202300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
6 Sobic.002G021900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK80 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.003G188200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
8 Sobic.008G012100 csAtPR5, putative, expressed -
9 Sobic.002G052100 early light-induced protein, chloroplast precursor, putative, expressed -
10 Sobic.001G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
11 Sobic.009G180550 - -
12 Sobic.002G109200 - -
13 Sobic.001G181100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@SCARECROW, putative, expressed -
14 Sobic.010G208750 - K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
15 Sobic.008G012150 - -
16 Sobic.003G175800 - -
17 Sobic.004G282900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized membrane protein, putative, expressed -
18 Sobic.004G214800 receptor-like protein kinase 5 precursor, putative, expressed -
19 Sobic.010G177800 RALFL28 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
20 Sobic.003G440300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G108700 Sobic002G108700 Sobic004G206800 Sobic004G206800 Sobic002G108700--Sobic004G206800 Sobic003G340350 Sobic003G340350 Sobic002G108700--Sobic003G340350 Sobic002G052000 Sobic002G052000 Sobic002G108700--Sobic002G052000 Sobic007G163433 Sobic007G163433 Sobic002G108700--Sobic007G163433 Sobic006G202300 Sobic006G202300 Sobic002G108700--Sobic006G202300 Sobic002G021900 Sobic002G021900 Sobic002G108700--Sobic002G021900 Sobic003G188200 Sobic003G188200 Sobic002G108700--Sobic003G188200 Sobic008G012100 Sobic008G012100 Sobic002G108700--Sobic008G012100 Sobic002G052100 Sobic002G052100 Sobic002G108700--Sobic002G052100 Sobic004G206800--Sobic003G340350 Sobic004G206800--Sobic007G163433 Sobic004G206800--Sobic002G021900 Sobic004G206800--Sobic008G012100 Sobic004G206800--Sobic002G108700 Sobic004G206800--Sobic002G052100 Sobic004G206800--Sobic002G052000 Sobic009G180550 Sobic009G180550 Sobic004G206800--Sobic009G180550 Sobic002G109200 Sobic002G109200 Sobic004G206800--Sobic002G109200 Sobic003G340350--Sobic004G206800 Sobic003G340350--Sobic007G163433 Sobic003G340350--Sobic002G021900 Sobic003G340350--Sobic008G012100 Sobic003G340350--Sobic002G052100 Sobic003G340350--Sobic002G052000 Sobic003G340350--Sobic009G180550 Sobic003G340350--Sobic002G108700 Sobic003G340350--Sobic002G109200 Sobic002G052000--Sobic002G052100 Sobic001G181100 Sobic001G181100 Sobic002G052000--Sobic001G181100 Sobic002G052000--Sobic003G188200 Sobic003G175800 Sobic003G175800 Sobic002G052000--Sobic003G175800 Sobic003G154400 Sobic003G154400 Sobic002G052000--Sobic003G154400 Sobic004G214800 Sobic004G214800 Sobic002G052000--Sobic004G214800 Sobic005G002400 Sobic005G002400 Sobic002G052000--Sobic005G002400 Sobic002G052000--Sobic007G163433 Sobic010G271800 Sobic010G271800 Sobic002G052000--Sobic010G271800 Sobic007G163433--Sobic003G340350 Sobic007G163433--Sobic004G206800 Sobic007G163433--Sobic002G021900 Sobic007G163433--Sobic008G012100 Sobic007G163433--Sobic002G052100 Sobic007G163433--Sobic009G180550 Sobic007G163433--Sobic002G052000 Sobic007G163433--Sobic002G109200 Sobic010G208750 Sobic010G208750 Sobic007G163433--Sobic010G208750 Sobic006G202300--Sobic003G188200 Sobic006G202300--Sobic002G108700 Sobic003G440300 Sobic003G440300 Sobic006G202300--Sobic003G440300 Sobic006G202300--Sobic002G052000 Sobic006G041000 Sobic006G041000 Sobic006G202300--Sobic006G041000 Sobic001G104900 Sobic001G104900 Sobic006G202300--Sobic001G104900 Sobic004G323400 Sobic004G323400 Sobic006G202300--Sobic004G323400 Sobic006G202300--Sobic002G052100 Sobic006G020300 Sobic006G020300 Sobic006G202300--Sobic006G020300 Sobic002G021900--Sobic007G163433 Sobic002G021900--Sobic003G340350 Sobic002G021900--Sobic004G206800 Sobic002G021900--Sobic008G012100 Sobic002G021900--Sobic009G180550 Sobic002G021900--Sobic010G208750 Sobic002G021900--Sobic002G052100 Sobic008G012150 Sobic008G012150 Sobic002G021900--Sobic008G012150 Sobic002G021900--Sobic003G175800 Sobic003G188200--Sobic002G052000 Sobic003G188200--Sobic002G052100 Sobic003G188200--Sobic003G440300 Sobic003G326000 Sobic003G326000 Sobic003G188200--Sobic003G326000 Sobic003G188200--Sobic005G002400 Sobic003G188200--Sobic001G181100 Sobic004G190100 Sobic004G190100 Sobic003G188200--Sobic004G190100 Sobic003G188200--Sobic004G323400 Sobic008G002400 Sobic008G002400 Sobic003G188200--Sobic008G002400 Sobic008G012100--Sobic008G012150 Sobic008G012100--Sobic007G163433 Sobic008G012100--Sobic002G021900 Sobic008G012100--Sobic003G340350 Sobic008G012100--Sobic004G206800 Sobic008G012100--Sobic010G208750 Sobic008G012100--Sobic002G109200 Sobic008G012100--Sobic002G052100 Sobic005G208200 Sobic005G208200 Sobic008G012100--Sobic005G208200 Sobic002G052100--Sobic002G052000 Sobic002G052100--Sobic001G181100 Sobic002G052100--Sobic004G214800 Sobic002G052100--Sobic005G002400 Sobic002G052100--Sobic003G175800 Sobic002G052100--Sobic003G154400 Sobic002G052100--Sobic006G020300 Sobic002G052100--Sobic003G326000 Sobic002G052100--Sobic010G271800
Octagon: transcription factors


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