Gene annotation
Transcriptome id Sobic.006G202300.2,Sobic.006G202300.1
Synonym Sb06g027405
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt A0A1B6PN06
Pfam PF00249 PF14379
Panther DB PTHR31499 PTHR31499:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45580 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os02g47190.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a021668 , Zm00025a009951
Brachypodium -
Barley HORVU2Hr1G102040.20 , HORVU2Hr1G102040.21 , HORVU2Hr1G102040.22 , HORVU2Hr1G102040.23 , HORVU2Hr1G102040.24 , HORVU2Hr1G102040.25 , HORVU2Hr1G102040.26 , HORVU2Hr1G102040.8 , HORVU2Hr1G102040.4 , HORVU2Hr1G102040.7 , HORVU2Hr1G102040.6 , HORVU2Hr1G102040.18 , HORVU2Hr1G102040.15 , HORVU2Hr1G102040.14 , HORVU2Hr1G102040.11 , HORVU2Hr1G102040.10 , HORVU2Hr1G102040.13
Wheat TraesCS2D02G437600 , TraesCS2A02G441300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G188200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
2 Sobic.002G108700 GRF zinc finger family protein, expressed -
3 Sobic.003G440300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.002G052000 early light-induced protein, chloroplast precursor, putative, expressed -
5 Sobic.006G041000 "Oxidoreductase, zinc-binding dehydrogenase family protein"("PubMedID : 26759170,PubMedID : 24597475")@dehydrogenase, putative, expressed -
6 Sobic.001G104900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@peptidase, M50 family, putative, expressed -
7 Sobic.004G323400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine esterase family protein, putative, expressed -
8 Sobic.002G052100 early light-induced protein, chloroplast precursor, putative, expressed -
9 Sobic.006G020300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
10 Sobic.003G326000 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
11 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
12 Sobic.002G213400 expressed protein -
13 Sobic.001G112900 expressed protein -
14 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G340300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nodulin, putative, expressed -
16 Sobic.001G313000 expressed protein -
17 Sobic.010G104700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
18 Sobic.001G181100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@SCARECROW, putative, expressed -
19 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.004G206800 - -


Gene co-expression network
sample Sobic006G202300 Sobic006G202300 Sobic003G188200 Sobic003G188200 Sobic006G202300--Sobic003G188200 Sobic002G108700 Sobic002G108700 Sobic006G202300--Sobic002G108700 Sobic003G440300 Sobic003G440300 Sobic006G202300--Sobic003G440300 Sobic002G052000 Sobic002G052000 Sobic006G202300--Sobic002G052000 Sobic006G041000 Sobic006G041000 Sobic006G202300--Sobic006G041000 Sobic001G104900 Sobic001G104900 Sobic006G202300--Sobic001G104900 Sobic004G323400 Sobic004G323400 Sobic006G202300--Sobic004G323400 Sobic002G052100 Sobic002G052100 Sobic006G202300--Sobic002G052100 Sobic006G020300 Sobic006G020300 Sobic006G202300--Sobic006G020300 Sobic003G188200--Sobic002G052000 Sobic003G188200--Sobic002G052100 Sobic003G188200--Sobic003G440300 Sobic003G326000 Sobic003G326000 Sobic003G188200--Sobic003G326000 Sobic005G002400 Sobic005G002400 Sobic003G188200--Sobic005G002400 Sobic001G181100 Sobic001G181100 Sobic003G188200--Sobic001G181100 Sobic004G190100 Sobic004G190100 Sobic003G188200--Sobic004G190100 Sobic003G188200--Sobic004G323400 Sobic008G002400 Sobic008G002400 Sobic003G188200--Sobic008G002400 Sobic004G206800 Sobic004G206800 Sobic002G108700--Sobic004G206800 Sobic003G340350 Sobic003G340350 Sobic002G108700--Sobic003G340350 Sobic002G108700--Sobic002G052000 Sobic007G163433 Sobic007G163433 Sobic002G108700--Sobic007G163433 Sobic002G108700--Sobic006G202300 Sobic002G021900 Sobic002G021900 Sobic002G108700--Sobic002G021900 Sobic002G108700--Sobic003G188200 Sobic008G012100 Sobic008G012100 Sobic002G108700--Sobic008G012100 Sobic002G108700--Sobic002G052100 Sobic003G440300--Sobic004G190100 Sobic003G162400 Sobic003G162400 Sobic003G440300--Sobic003G162400 Sobic003G440300--Sobic003G326000 Sobic003G440300--Sobic003G188200 Sobic002G291800 Sobic002G291800 Sobic003G440300--Sobic002G291800 Sobic001G112900 Sobic001G112900 Sobic003G440300--Sobic001G112900 Sobic003G440300--Sobic005G002400 Sobic006G154800 Sobic006G154800 Sobic003G440300--Sobic006G154800 Sobic003G440300--Sobic004G323400 Sobic002G052000--Sobic002G052100 Sobic002G052000--Sobic001G181100 Sobic002G052000--Sobic003G188200 Sobic003G175800 Sobic003G175800 Sobic002G052000--Sobic003G175800 Sobic003G154400 Sobic003G154400 Sobic002G052000--Sobic003G154400 Sobic004G214800 Sobic004G214800 Sobic002G052000--Sobic004G214800 Sobic002G052000--Sobic005G002400 Sobic002G052000--Sobic007G163433 Sobic010G271800 Sobic010G271800 Sobic002G052000--Sobic010G271800 Sobic009G259100 Sobic009G259100 Sobic006G041000--Sobic009G259100 Sobic006G041000--Sobic004G190100 Sobic006G041000--Sobic001G112900 Sobic006G041000--Sobic003G440300 Sobic004G267700 Sobic004G267700 Sobic006G041000--Sobic004G267700 Sobic002G351200 Sobic002G351200 Sobic006G041000--Sobic002G351200 Sobic002G213400 Sobic002G213400 Sobic006G041000--Sobic002G213400 Sobic007G121300 Sobic007G121300 Sobic006G041000--Sobic007G121300 Sobic003G304300 Sobic003G304300 Sobic006G041000--Sobic003G304300 Sobic002G338800 Sobic002G338800 Sobic001G104900--Sobic002G338800 Sobic001G104900--Sobic004G323400 Sobic009G245000 Sobic009G245000 Sobic001G104900--Sobic009G245000 Sobic001G104900--Sobic001G112900 Sobic001G313000 Sobic001G313000 Sobic001G104900--Sobic001G313000 Sobic001G104900--Sobic006G041000 Sobic001G104900--Sobic002G052000 Sobic002G295100 Sobic002G295100 Sobic001G104900--Sobic002G295100 Sobic003G186800 Sobic003G186800 Sobic001G104900--Sobic003G186800 Sobic002G417300 Sobic002G417300 Sobic004G323400--Sobic002G417300 Sobic004G323400--Sobic002G295100 Sobic004G323400--Sobic003G188200 Sobic004G323400--Sobic001G104900 Sobic004G323400--Sobic003G440300 Sobic003G425300 Sobic003G425300 Sobic004G323400--Sobic003G425300 Sobic004G323400--Sobic006G041000 Sobic004G282900 Sobic004G282900 Sobic004G323400--Sobic004G282900 Sobic004G323400--Sobic002G291800 Sobic002G052100--Sobic002G052000 Sobic002G052100--Sobic001G181100 Sobic002G052100--Sobic004G214800 Sobic002G052100--Sobic005G002400 Sobic002G052100--Sobic003G175800 Sobic002G052100--Sobic003G154400 Sobic002G052100--Sobic006G020300 Sobic002G052100--Sobic003G326000 Sobic002G052100--Sobic010G271800 Sobic001G434000 Sobic001G434000 Sobic006G020300--Sobic001G434000 Sobic006G020300--Sobic005G002400 Sobic006G020300--Sobic002G052100 Sobic006G020300--Sobic003G154400 Sobic006G020300--Sobic003G175800 Sobic006G020300--Sobic003G326000 Sobic006G020300--Sobic004G214800 Sobic010G104700 Sobic010G104700 Sobic006G020300--Sobic010G104700 Sobic006G020300--Sobic001G181100
Octagon: transcription factors


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