Gene annotation
Transcriptome id Sobic.002G126600.1
Synonym C4H, CYP73A5, REF3, ATC4H, Sb02g010910
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cytochrome P450, putative, expressed
UniProt Q94IP1
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF65
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology K00487; trans-cinnamate 4-monooxygenase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G30490 : cinnamate-4-hydroxylase
RAP-DB (Rice) LOC_Os05g25640.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a039769 , Zm00025a036914 , Zm00025a043283 , Zm00025a020303
Brachypodium KQK10342 , KQJ99419 , KQK06925
Barley HORVU7Hr1G093630.3 , HORVU7Hr1G093630.1 , HORVU3Hr1G025920.8 , HORVU3Hr1G025920.7 , HORVU3Hr1G025920.6 , HORVU3Hr1G025920.5 , HORVU3Hr1G025920.4 , HORVU3Hr1G025920.3 , HORVU3Hr1G025920.2 , HORVU3Hr1G025920.1 , HORVU4Hr1G087630.4 , HORVU4Hr1G087630.5 , HORVU4Hr1G087630.6 , HORVU4Hr1G087630.7 , HORVU4Hr1G087630.1 , HORVU4Hr1G087630.2 , HORVU4Hr1G087630.3 , HORVU3Hr1G080830.4 , HORVU3Hr1G080830.1 , HORVU3Hr1G080830.2 , HORVU3Hr1G080830.3 , HORVU4Hr1G087560.1 , HORVU5Hr1G017360.2 , HORVU5Hr1G017360.1
Wheat TraesCS7A02G398900 , TraesCS7A02G398900 , TraesCS4B02G365100 , TraesCS3B02G375100 , TraesCS3A02G342900 , TraesCS3D02G336900 , TraesCS3D02G136900 , TraesCS3B02G154000 , TraesCS2D02G300200 , TraesCS3D02G336900 , TraesCSU02G138300 , TraesCS5A02G534000 , TraesCS3A02G136100
Populus -


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cDNA sequences
Sobic.002G126600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G272800 VHS and GAT domain containing protein, expressed -
2 Sobic.002G153500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
3 Sobic.003G386000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
4 Sobic.010G239500 ubiquitin family protein, putative, expressed K08770: ubiquitin C
5 Sobic.009G149400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
6 Sobic.001G281400 expressed protein -
7 Sobic.002G204100 cytochrome c oxidase copper chaperone, putative, expressed K02260: cytochrome c oxidase assembly protein subunit 17
8 Sobic.008G032100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
10 Sobic.001G340500 LSM domain containing protein, expressed K11099: SNRPG, small nuclear ribonucleoprotein G
11 Sobic.005G092900 - -
12 Sobic.004G284500 ORM1, putative, expressed -
13 Sobic.004G334400 ANTH, putative, expressed -
14 Sobic.007G078100 UPF0041 domain containing protein, putative, expressed -
15 Sobic.002G187500 hypoxia-responsive family protein, putative, expressed -
16 Sobic.001G048832 - -
17 Sobic.001G433700 chorismate synthase 2, chloroplast precursor, putative, expressed K01736: chorismate synthase
18 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
19 Sobic.004G225500 bolA, putative, expressed K05527: BolA family transcriptional regulator, general stress-responsive regulator
20 Sobic.003G184100 auxin-induced protein 5NG4, putative, expressed -


Gene co-expression network
sample Sobic002G126600 Sobic002G126600 Sobic004G272800 Sobic004G272800 Sobic002G126600--Sobic004G272800 Sobic002G153500 Sobic002G153500 Sobic002G126600--Sobic002G153500 Sobic003G386000 Sobic003G386000 Sobic002G126600--Sobic003G386000 Sobic010G239500 Sobic010G239500 Sobic002G126600--Sobic010G239500 Sobic009G149400 Sobic009G149400 Sobic002G126600--Sobic009G149400 Sobic001G281400 Sobic001G281400 Sobic002G126600--Sobic001G281400 Sobic002G204100 Sobic002G204100 Sobic002G126600--Sobic002G204100 Sobic008G032100 Sobic008G032100 Sobic002G126600--Sobic008G032100 Sobic003G253000 Sobic003G253000 Sobic002G126600--Sobic003G253000 Sobic002G267500 Sobic002G267500 Sobic004G272800--Sobic002G267500 Sobic004G272800--Sobic001G281400 Sobic004G272800--Sobic003G253000 Sobic001G048832 Sobic001G048832 Sobic004G272800--Sobic001G048832 Sobic002G190900 Sobic002G190900 Sobic004G272800--Sobic002G190900 Sobic002G345300 Sobic002G345300 Sobic004G272800--Sobic002G345300 Sobic002G046100 Sobic002G046100 Sobic004G272800--Sobic002G046100 Sobic010G041600 Sobic010G041600 Sobic004G272800--Sobic010G041600 Sobic005G188100 Sobic005G188100 Sobic004G272800--Sobic005G188100 Sobic001G224400 Sobic001G224400 Sobic002G153500--Sobic001G224400 Sobic008G189300 Sobic008G189300 Sobic002G153500--Sobic008G189300 Sobic004G284500 Sobic004G284500 Sobic002G153500--Sobic004G284500 Sobic002G153500--Sobic004G272800 Sobic004G225500 Sobic004G225500 Sobic002G153500--Sobic004G225500 Sobic001G132100 Sobic001G132100 Sobic002G153500--Sobic001G132100 Sobic002G153500--Sobic008G032100 Sobic007G115100 Sobic007G115100 Sobic002G153500--Sobic007G115100 Sobic004G204900 Sobic004G204900 Sobic002G153500--Sobic004G204900 Sobic003G386000--Sobic004G272800 Sobic002G355300 Sobic002G355300 Sobic003G386000--Sobic002G355300 Sobic003G386000--Sobic005G188100 Sobic003G155400 Sobic003G155400 Sobic003G386000--Sobic003G155400 Sobic004G310300 Sobic004G310300 Sobic003G386000--Sobic004G310300 Sobic003G386000--Sobic002G153500 Sobic003G386000--Sobic002G190900 Sobic003G386000--Sobic001G281400 Sobic001G322500 Sobic001G322500 Sobic003G386000--Sobic001G322500 Sobic002G175100 Sobic002G175100 Sobic010G239500--Sobic002G175100 Sobic002G081600 Sobic002G081600 Sobic010G239500--Sobic002G081600 Sobic001G374700 Sobic001G374700 Sobic010G239500--Sobic001G374700 Sobic002G398901 Sobic002G398901 Sobic010G239500--Sobic002G398901 Sobic006G213000 Sobic006G213000 Sobic010G239500--Sobic006G213000 Sobic001G481400 Sobic001G481400 Sobic010G239500--Sobic001G481400 Sobic006G137100 Sobic006G137100 Sobic010G239500--Sobic006G137100 Sobic009G240600 Sobic009G240600 Sobic010G239500--Sobic009G240600 Sobic006G116700 Sobic006G116700 Sobic010G239500--Sobic006G116700 Sobic002G187500 Sobic002G187500 Sobic009G149400--Sobic002G187500 Sobic009G149400--Sobic001G281400 Sobic003G285800 Sobic003G285800 Sobic009G149400--Sobic003G285800 Sobic009G149400--Sobic002G267500 Sobic009G149400--Sobic004G272800 Sobic010G023800 Sobic010G023800 Sobic009G149400--Sobic010G023800 Sobic001G433700 Sobic001G433700 Sobic009G149400--Sobic001G433700 Sobic009G149400--Sobic004G284500 Sobic007G171000 Sobic007G171000 Sobic009G149400--Sobic007G171000 Sobic004G187900 Sobic004G187900 Sobic001G281400--Sobic004G187900 Sobic001G281400--Sobic002G267500 Sobic010G149300 Sobic010G149300 Sobic001G281400--Sobic010G149300 Sobic001G281400--Sobic002G190900 Sobic001G281400--Sobic002G046100 Sobic010G086200 Sobic010G086200 Sobic001G281400--Sobic010G086200 Sobic009G141800 Sobic009G141800 Sobic001G281400--Sobic009G141800 Sobic009G008900 Sobic009G008900 Sobic001G281400--Sobic009G008900 Sobic001G499300 Sobic001G499300 Sobic001G281400--Sobic001G499300 Sobic009G203100 Sobic009G203100 Sobic002G204100--Sobic009G203100 Sobic002G204100--Sobic003G253000 Sobic001G459200 Sobic001G459200 Sobic002G204100--Sobic001G459200 Sobic009G185800 Sobic009G185800 Sobic002G204100--Sobic009G185800 Sobic005G034400 Sobic005G034400 Sobic002G204100--Sobic005G034400 Sobic004G049900 Sobic004G049900 Sobic002G204100--Sobic004G049900 Sobic004G055200 Sobic004G055200 Sobic002G204100--Sobic004G055200 Sobic002G204100--Sobic008G189300 Sobic002G204100--Sobic002G187500 Sobic010G009300 Sobic010G009300 Sobic008G032100--Sobic010G009300 Sobic005G084600 Sobic005G084600 Sobic008G032100--Sobic005G084600 Sobic007G087200 Sobic007G087200 Sobic008G032100--Sobic007G087200 Sobic001G177800 Sobic001G177800 Sobic008G032100--Sobic001G177800 Sobic005G195301 Sobic005G195301 Sobic008G032100--Sobic005G195301 Sobic008G032100--Sobic002G187500 Sobic009G077800 Sobic009G077800 Sobic008G032100--Sobic009G077800 Sobic003G113700 Sobic003G113700 Sobic008G032100--Sobic003G113700 Sobic005G206601 Sobic005G206601 Sobic008G032100--Sobic005G206601 Sobic006G141500 Sobic006G141500 Sobic003G253000--Sobic006G141500 Sobic003G253000--Sobic004G049900 Sobic003G253000--Sobic002G267500 Sobic003G253000--Sobic004G272800 Sobic003G253000--Sobic001G459200 Sobic003G253000--Sobic002G345300 Sobic003G253000--Sobic002G046100 Sobic003G253000--Sobic009G185800 Sobic006G108400 Sobic006G108400 Sobic003G253000--Sobic006G108400
Octagon: transcription factors


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