Gene annotation
Transcriptome id Sobic.002G165700.1
Synonym Sb02g020910, SbERF20, ethylene response factor 20
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5X931
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G68550 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os09g13940.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a046423
Brachypodium KQJ89812
Barley HORVU5Hr1G055190.7 , HORVU5Hr1G055190.6 , HORVU5Hr1G055190.5 , HORVU5Hr1G055190.4 , HORVU5Hr1G055190.3 , HORVU5Hr1G055190.2 , HORVU5Hr1G055190.9 , HORVU5Hr1G055190.8 , HORVU5Hr1G055190.10
Wheat -
Populus -


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cDNA sequences
Sobic.002G165700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G060400 OsFBX237 - F-box domain containing protein, expressed -
2 Sobic.009G123700 NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
3 Sobic.008G116700 expressed protein -
4 Sobic.009G008200 STE_PAK_Ste20++TranslationKinase_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
5 Sobic.002G069000 galactosyltransferase family protein, putative, expressed -
6 Sobic.007G016750 - -
7 Sobic.010G134000 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
8 Sobic.003G433400 OsDegp14 - Putative Deg protease homologue, expressed -
9 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
10 Sobic.008G029600 - -
11 Sobic.003G235100 HD domain containing protein 2, putative, expressed K07023: putative hydrolases of HD superfamily
12 Sobic.004G328100 expressed protein -
13 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
14 Sobic.005G070301 - K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
15 Sobic.001G025700 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
16 Sobic.005G048500 serine esterase family protein, putative, expressed -
17 Sobic.001G218600 MATH domain containing protein, expressed -
18 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
19 Sobic.010G027100 expressed protein -
20 Sobic.008G041300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3


Gene co-expression network
sample Sobic002G165700 Sobic002G165700 Sobic002G060400 Sobic002G060400 Sobic002G165700--Sobic002G060400 Sobic009G123700 Sobic009G123700 Sobic002G165700--Sobic009G123700 Sobic008G116700 Sobic008G116700 Sobic002G165700--Sobic008G116700 Sobic009G008200 Sobic009G008200 Sobic002G165700--Sobic009G008200 Sobic002G069000 Sobic002G069000 Sobic002G165700--Sobic002G069000 Sobic007G016750 Sobic007G016750 Sobic002G165700--Sobic007G016750 Sobic010G134000 Sobic010G134000 Sobic002G165700--Sobic010G134000 Sobic003G433400 Sobic003G433400 Sobic002G165700--Sobic003G433400 Sobic002G076500 Sobic002G076500 Sobic002G165700--Sobic002G076500 Sobic002G304500 Sobic002G304500 Sobic002G060400--Sobic002G304500 Sobic004G064800 Sobic004G064800 Sobic002G060400--Sobic004G064800 Sobic005G201200 Sobic005G201200 Sobic002G060400--Sobic005G201200 Sobic010G255400 Sobic010G255400 Sobic002G060400--Sobic010G255400 Sobic008G041300 Sobic008G041300 Sobic002G060400--Sobic008G041300 Sobic001G076600 Sobic001G076600 Sobic002G060400--Sobic001G076600 Sobic007G060100 Sobic007G060100 Sobic002G060400--Sobic007G060100 Sobic002G015700 Sobic002G015700 Sobic002G060400--Sobic002G015700 Sobic002G158300 Sobic002G158300 Sobic002G060400--Sobic002G158300 Sobic004G239800 Sobic004G239800 Sobic009G123700--Sobic004G239800 Sobic007G102300 Sobic007G102300 Sobic009G123700--Sobic007G102300 Sobic006G119900 Sobic006G119900 Sobic009G123700--Sobic006G119900 Sobic009G123700--Sobic001G076600 Sobic010G270100 Sobic010G270100 Sobic009G123700--Sobic010G270100 Sobic006G193400 Sobic006G193400 Sobic009G123700--Sobic006G193400 Sobic009G046900 Sobic009G046900 Sobic009G123700--Sobic009G046900 Sobic003G178800 Sobic003G178800 Sobic009G123700--Sobic003G178800 Sobic010G058300 Sobic010G058300 Sobic009G123700--Sobic010G058300 Sobic007G087000 Sobic007G087000 Sobic008G116700--Sobic007G087000 Sobic002G200000 Sobic002G200000 Sobic008G116700--Sobic002G200000 Sobic001G114200 Sobic001G114200 Sobic008G116700--Sobic001G114200 Sobic002G079000 Sobic002G079000 Sobic008G116700--Sobic002G079000 Sobic008G116700--Sobic002G076500 Sobic009G107300 Sobic009G107300 Sobic008G116700--Sobic009G107300 Sobic007G076400 Sobic007G076400 Sobic008G116700--Sobic007G076400 Sobic008G069300 Sobic008G069300 Sobic008G116700--Sobic008G069300 Sobic004G198600 Sobic004G198600 Sobic008G116700--Sobic004G198600 Sobic002G296400 Sobic002G296400 Sobic009G008200--Sobic002G296400 Sobic004G063300 Sobic004G063300 Sobic009G008200--Sobic004G063300 Sobic009G008200--Sobic002G076500 Sobic006G210700 Sobic006G210700 Sobic009G008200--Sobic006G210700 Sobic002G066800 Sobic002G066800 Sobic009G008200--Sobic002G066800 Sobic002G141200 Sobic002G141200 Sobic009G008200--Sobic002G141200 Sobic001G097900 Sobic001G097900 Sobic009G008200--Sobic001G097900 Sobic001G051400 Sobic001G051400 Sobic009G008200--Sobic001G051400 Sobic003G023200 Sobic003G023200 Sobic009G008200--Sobic003G023200 Sobic002G069000--Sobic003G433400 Sobic002G069000--Sobic008G116700 Sobic003G403300 Sobic003G403300 Sobic002G069000--Sobic003G403300 Sobic006G270000 Sobic006G270000 Sobic002G069000--Sobic006G270000 Sobic010G027100 Sobic010G027100 Sobic002G069000--Sobic010G027100 Sobic003G198900 Sobic003G198900 Sobic002G069000--Sobic003G198900 Sobic003G010800 Sobic003G010800 Sobic002G069000--Sobic003G010800 Sobic005G048500 Sobic005G048500 Sobic002G069000--Sobic005G048500 Sobic003G065201 Sobic003G065201 Sobic002G069000--Sobic003G065201 Sobic007G016750--Sobic010G027100 Sobic007G099900 Sobic007G099900 Sobic007G016750--Sobic007G099900 Sobic009G006700 Sobic009G006700 Sobic007G016750--Sobic009G006700 Sobic003G402800 Sobic003G402800 Sobic007G016750--Sobic003G402800 Sobic006G038700 Sobic006G038700 Sobic007G016750--Sobic006G038700 Sobic007G016750--Sobic003G065201 Sobic009G048700 Sobic009G048700 Sobic007G016750--Sobic009G048700 Sobic007G219601 Sobic007G219601 Sobic007G016750--Sobic007G219601 Sobic002G074800 Sobic002G074800 Sobic007G016750--Sobic002G074800 Sobic010G134000--Sobic003G010800 Sobic010G134000--Sobic003G433400 Sobic010G134000--Sobic003G403300 Sobic002G310900 Sobic002G310900 Sobic010G134000--Sobic002G310900 Sobic002G407000 Sobic002G407000 Sobic010G134000--Sobic002G407000 Sobic001G411200 Sobic001G411200 Sobic010G134000--Sobic001G411200 Sobic003G291800 Sobic003G291800 Sobic010G134000--Sobic003G291800 Sobic001G178100 Sobic001G178100 Sobic010G134000--Sobic001G178100 Sobic010G134000--Sobic006G270000 Sobic003G433400--Sobic006G270000 Sobic009G217400 Sobic009G217400 Sobic003G433400--Sobic009G217400 Sobic003G433400--Sobic003G010800 Sobic003G433400--Sobic003G291800 Sobic003G433400--Sobic005G048500 Sobic003G235100 Sobic003G235100 Sobic003G433400--Sobic003G235100 Sobic003G092800 Sobic003G092800 Sobic003G433400--Sobic003G092800 Sobic003G433400--Sobic002G069000 Sobic002G084800 Sobic002G084800 Sobic003G433400--Sobic002G084800 Sobic007G153500 Sobic007G153500 Sobic002G076500--Sobic007G153500 Sobic002G076500--Sobic008G116700 Sobic003G432800 Sobic003G432800 Sobic002G076500--Sobic003G432800 Sobic002G322400 Sobic002G322400 Sobic002G076500--Sobic002G322400 Sobic002G076500--Sobic006G210700 Sobic008G019532 Sobic008G019532 Sobic002G076500--Sobic008G019532 Sobic005G087300 Sobic005G087300 Sobic002G076500--Sobic005G087300 Sobic004G172500 Sobic004G172500 Sobic002G076500--Sobic004G172500 Sobic002G076500--Sobic001G051400
Octagon: transcription factors


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