Gene annotation
Transcriptome id Sobic.002G249101.1
Synonym -
Functional annotation -
UniProt A0A1W0W5L7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
2 Sobic.003G364100 glycosyl hydrolase, putative, expressed K01183: chitinase
3 Sobic.010G176700 receptor-like protein kinase precursor, putative, expressed -
4 Sobic.005G103800 miro, putative, expressed K07953: GTP-binding protein SAR1
5 Sobic.010G224200 MYB family transcription factor, putative, expressed -
6 Sobic.003G076100 limonoid UDP-glucosyltransferase, putative, expressed -
7 Sobic.004G167800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@pectinesterase inhibitor domain containing protein, putative, expressed -
8 Sobic.002G090200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytidine deaminase, putative, expressed -
9 Sobic.004G277000 purine permease, putative, expressed -
10 Sobic.008G050500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.009G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
12 Sobic.004G307000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
13 Sobic.004G239200 transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
14 Sobic.006G140200 sialyltransferase family domain containing protein, expressed -
15 Sobic.009G003900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
16 Sobic.008G133900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G277850 - -
18 Sobic.010G124300 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
19 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
20 Sobic.001G325000 expressed protein -


Gene co-expression network
sample Sobic002G249101 Sobic002G249101 Sobic002G249000 Sobic002G249000 Sobic002G249101--Sobic002G249000 Sobic003G364100 Sobic003G364100 Sobic002G249101--Sobic003G364100 Sobic010G176700 Sobic010G176700 Sobic002G249101--Sobic010G176700 Sobic005G103800 Sobic005G103800 Sobic002G249101--Sobic005G103800 Sobic010G224200 Sobic010G224200 Sobic002G249101--Sobic010G224200 Sobic003G076100 Sobic003G076100 Sobic002G249101--Sobic003G076100 Sobic004G167800 Sobic004G167800 Sobic002G249101--Sobic004G167800 Sobic002G090200 Sobic002G090200 Sobic002G249101--Sobic002G090200 Sobic004G277000 Sobic004G277000 Sobic002G249101--Sobic004G277000 Sobic002G249000--Sobic004G277000 Sobic001G010400 Sobic001G010400 Sobic002G249000--Sobic001G010400 Sobic004G050000 Sobic004G050000 Sobic002G249000--Sobic004G050000 Sobic009G003900 Sobic009G003900 Sobic002G249000--Sobic009G003900 Sobic002G249000--Sobic010G224200 Sobic005G117400 Sobic005G117400 Sobic002G249000--Sobic005G117400 Sobic002G249000--Sobic010G176700 Sobic002G180600 Sobic002G180600 Sobic002G249000--Sobic002G180600 Sobic004G307000 Sobic004G307000 Sobic002G249000--Sobic004G307000 Sobic003G236450 Sobic003G236450 Sobic003G364100--Sobic003G236450 Sobic002G128300 Sobic002G128300 Sobic003G364100--Sobic002G128300 Sobic006G153100 Sobic006G153100 Sobic003G364100--Sobic006G153100 Sobic005G179200 Sobic005G179200 Sobic003G364100--Sobic005G179200 Sobic007G141500 Sobic007G141500 Sobic003G364100--Sobic007G141500 Sobic010G079600 Sobic010G079600 Sobic003G364100--Sobic010G079600 Sobic001G325000 Sobic001G325000 Sobic003G364100--Sobic001G325000 Sobic007G170000 Sobic007G170000 Sobic003G364100--Sobic007G170000 Sobic001G243600 Sobic001G243600 Sobic003G364100--Sobic001G243600 Sobic003G061400 Sobic003G061400 Sobic010G176700--Sobic003G061400 Sobic010G176700--Sobic002G249000 Sobic010G176700--Sobic009G003900 Sobic001G184000 Sobic001G184000 Sobic010G176700--Sobic001G184000 Sobic002G057300 Sobic002G057300 Sobic010G176700--Sobic002G057300 Sobic003G442500 Sobic003G442500 Sobic010G176700--Sobic003G442500 Sobic004G185900 Sobic004G185900 Sobic010G176700--Sobic004G185900 Sobic010G176700--Sobic001G010400 Sobic010G176700--Sobic004G277000 Sobic007G067400 Sobic007G067400 Sobic005G103800--Sobic007G067400 Sobic005G011200 Sobic005G011200 Sobic005G103800--Sobic005G011200 Sobic001G348700 Sobic001G348700 Sobic005G103800--Sobic001G348700 Sobic001G333400 Sobic001G333400 Sobic005G103800--Sobic001G333400 Sobic004G221500 Sobic004G221500 Sobic005G103800--Sobic004G221500 Sobic010G259500 Sobic010G259500 Sobic005G103800--Sobic010G259500 Sobic001G365100 Sobic001G365100 Sobic005G103800--Sobic001G365100 Sobic002G290500 Sobic002G290500 Sobic005G103800--Sobic002G290500 Sobic004G071650 Sobic004G071650 Sobic005G103800--Sobic004G071650 Sobic003G019200 Sobic003G019200 Sobic010G224200--Sobic003G019200 Sobic010G224200--Sobic002G249000 Sobic009G177800 Sobic009G177800 Sobic010G224200--Sobic009G177800 Sobic004G058000 Sobic004G058000 Sobic010G224200--Sobic004G058000 Sobic008G111100 Sobic008G111100 Sobic010G224200--Sobic008G111100 Sobic002G423300 Sobic002G423300 Sobic010G224200--Sobic002G423300 Sobic010G224200--Sobic004G307000 Sobic010G224200--Sobic004G050000 Sobic010G107100 Sobic010G107100 Sobic010G224200--Sobic010G107100 Sobic007G122866 Sobic007G122866 Sobic003G076100--Sobic007G122866 Sobic007G159300 Sobic007G159300 Sobic003G076100--Sobic007G159300 Sobic001G052500 Sobic001G052500 Sobic003G076100--Sobic001G052500 Sobic004G271100 Sobic004G271100 Sobic003G076100--Sobic004G271100 Sobic006G163033 Sobic006G163033 Sobic003G076100--Sobic006G163033 Sobic003G076100--Sobic005G103800 Sobic001G206600 Sobic001G206600 Sobic003G076100--Sobic001G206600 Sobic003G277850 Sobic003G277850 Sobic003G076100--Sobic003G277850 Sobic003G225000 Sobic003G225000 Sobic003G076100--Sobic003G225000 Sobic004G167800--Sobic009G177800 Sobic002G183200 Sobic002G183200 Sobic004G167800--Sobic002G183200 Sobic004G166700 Sobic004G166700 Sobic004G167800--Sobic004G166700 Sobic009G234100 Sobic009G234100 Sobic004G167800--Sobic009G234100 Sobic004G167800--Sobic002G423300 Sobic001G252300 Sobic001G252300 Sobic004G167800--Sobic001G252300 Sobic001G119000 Sobic001G119000 Sobic004G167800--Sobic001G119000 Sobic004G208700 Sobic004G208700 Sobic004G167800--Sobic004G208700 Sobic005G091500 Sobic005G091500 Sobic004G167800--Sobic005G091500 Sobic006G218300 Sobic006G218300 Sobic002G090200--Sobic006G218300 Sobic002G090200--Sobic004G050000 Sobic004G074500 Sobic004G074500 Sobic002G090200--Sobic004G074500 Sobic006G165400 Sobic006G165400 Sobic002G090200--Sobic006G165400 Sobic001G026900 Sobic001G026900 Sobic002G090200--Sobic001G026900 Sobic004G308000 Sobic004G308000 Sobic002G090200--Sobic004G308000 Sobic002G090200--Sobic004G277000 Sobic003G215800 Sobic003G215800 Sobic002G090200--Sobic003G215800 Sobic002G090200--Sobic002G249000 Sobic004G277000--Sobic004G050000 Sobic009G043600 Sobic009G043600 Sobic004G277000--Sobic009G043600 Sobic004G277000--Sobic002G249000 Sobic004G277000--Sobic009G003900 Sobic002G267500 Sobic002G267500 Sobic004G277000--Sobic002G267500 Sobic006G173900 Sobic006G173900 Sobic004G277000--Sobic006G173900 Sobic004G276100 Sobic004G276100 Sobic004G277000--Sobic004G276100 Sobic004G277000--Sobic009G177800 Sobic002G264400 Sobic002G264400 Sobic004G277000--Sobic002G264400
Octagon: transcription factors


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