Gene annotation
Transcriptome id Sobic.003G364100.1
Synonym CHIA, ATCHIA, Sb03g040580
Functional annotation glycosyl hydrolase, putative, expressed
UniProt C5XQJ0
Pfam PF00704
Panther DB PTHR11177
NCBI CDD -
KEGG Orthology K01183; chitinase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G24090 : chitinase A
RAP-DB (Rice) LOC_Os01g64100.1 : glycosyl hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a026760 , Zm00025a030311 , Zm00025a026759
Brachypodium KQK09026 , PNT72617 , KQK09284 , KQK10704 , KQK10703 , KQK10702 , PNT72403
Barley HORVU3Hr1G084230.2 , HORVU3Hr1G084230.1 , HORVU3Hr1G084280.1 , HORVU3Hr1G087870.1 , HORVU3Hr1G084220.1 , HORVU3Hr1G084250.1 , HORVU3Hr1G084220.3 , HORVU3Hr1G084220.2 , HORVU3Hr1G083670.2
Wheat TraesCS3A02G373600 , TraesCS3B02G294900 , TraesCS3B02G405900 , TraesCS3A02G261700 , TraesCS3D02G366400 , TraesCS3D02G261700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G236450 - -
2 Sobic.002G128300 MLA6 protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
3 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
4 Sobic.005G179200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK112d - OsWAK receptor-like protein kinase, expressed -
5 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
6 Sobic.010G079600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.001G325000 expressed protein -
8 Sobic.007G170000 - -
9 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
10 Sobic.009G229000 expressed protein -
11 Sobic.006G162100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glyoxalase family protein, putative, expressed -
12 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.003G087300 nuclease PA3, putative, expressed -
14 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
15 Sobic.004G236100 laccase precursor protein, putative, expressed K05909: laccase
16 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.003G117600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
18 Sobic.009G120000 - -
19 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
20 Sobic.002G421800 Up-reguralion under drought(PubMedID : 24916767)@homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic003G364100 Sobic003G364100 Sobic003G236450 Sobic003G236450 Sobic003G364100--Sobic003G236450 Sobic002G128300 Sobic002G128300 Sobic003G364100--Sobic002G128300 Sobic006G153100 Sobic006G153100 Sobic003G364100--Sobic006G153100 Sobic005G179200 Sobic005G179200 Sobic003G364100--Sobic005G179200 Sobic007G141500 Sobic007G141500 Sobic003G364100--Sobic007G141500 Sobic010G079600 Sobic010G079600 Sobic003G364100--Sobic010G079600 Sobic001G325000 Sobic001G325000 Sobic003G364100--Sobic001G325000 Sobic007G170000 Sobic007G170000 Sobic003G364100--Sobic007G170000 Sobic001G243600 Sobic001G243600 Sobic003G364100--Sobic001G243600 Sobic003G297600 Sobic003G297600 Sobic003G236450--Sobic003G297600 Sobic003G280100 Sobic003G280100 Sobic003G236450--Sobic003G280100 Sobic009G077800 Sobic009G077800 Sobic003G236450--Sobic009G077800 Sobic003G236450--Sobic007G141500 Sobic003G236450--Sobic006G153100 Sobic003G280200 Sobic003G280200 Sobic003G236450--Sobic003G280200 Sobic001G325400 Sobic001G325400 Sobic003G236450--Sobic001G325400 Sobic001G070800 Sobic001G070800 Sobic003G236450--Sobic001G070800 Sobic002G415100 Sobic002G415100 Sobic003G236450--Sobic002G415100 Sobic002G128300--Sobic006G153100 Sobic002G128300--Sobic005G179200 Sobic001G444400 Sobic001G444400 Sobic002G128300--Sobic001G444400 Sobic002G128300--Sobic001G243600 Sobic009G120000 Sobic009G120000 Sobic002G128300--Sobic009G120000 Sobic004G111800 Sobic004G111800 Sobic002G128300--Sobic004G111800 Sobic002G128300--Sobic003G236450 Sobic001G063000 Sobic001G063000 Sobic002G128300--Sobic001G063000 Sobic002G128300--Sobic007G141500 Sobic006G153100--Sobic001G444400 Sobic006G153100--Sobic007G141500 Sobic003G117600 Sobic003G117600 Sobic006G153100--Sobic003G117600 Sobic002G416600 Sobic002G416600 Sobic006G153100--Sobic002G416600 Sobic010G084400 Sobic010G084400 Sobic006G153100--Sobic010G084400 Sobic006G153100--Sobic005G179200 Sobic003G252800 Sobic003G252800 Sobic006G153100--Sobic003G252800 Sobic002G199650 Sobic002G199650 Sobic006G153100--Sobic002G199650 Sobic009G196400 Sobic009G196400 Sobic006G153100--Sobic009G196400 Sobic005G179200--Sobic006G153100 Sobic005G179200--Sobic003G117600 Sobic005G206601 Sobic005G206601 Sobic005G179200--Sobic005G206601 Sobic010G084700 Sobic010G084700 Sobic005G179200--Sobic010G084700 Sobic005G179200--Sobic001G444400 Sobic005G063100 Sobic005G063100 Sobic005G179200--Sobic005G063100 Sobic004G071650 Sobic004G071650 Sobic005G179200--Sobic004G071650 Sobic005G051200 Sobic005G051200 Sobic005G179200--Sobic005G051200 Sobic005G101700 Sobic005G101700 Sobic005G179200--Sobic005G101700 Sobic007G141500--Sobic003G117600 Sobic007G141500--Sobic006G153100 Sobic003G087300 Sobic003G087300 Sobic007G141500--Sobic003G087300 Sobic007G141500--Sobic002G416600 Sobic002G125700 Sobic002G125700 Sobic007G141500--Sobic002G125700 Sobic004G166700 Sobic004G166700 Sobic007G141500--Sobic004G166700 Sobic007G141500--Sobic001G444400 Sobic007G141500--Sobic001G325400 Sobic010G052700 Sobic010G052700 Sobic007G141500--Sobic010G052700 Sobic010G079600--Sobic007G170000 Sobic010G079600--Sobic003G364100 Sobic002G044800 Sobic002G044800 Sobic010G079600--Sobic002G044800 Sobic001G256200 Sobic001G256200 Sobic010G079600--Sobic001G256200 Sobic010G079600--Sobic009G196400 Sobic004G333150 Sobic004G333150 Sobic010G079600--Sobic004G333150 Sobic002G421800 Sobic002G421800 Sobic010G079600--Sobic002G421800 Sobic004G273400 Sobic004G273400 Sobic010G079600--Sobic004G273400 Sobic006G113500 Sobic006G113500 Sobic010G079600--Sobic006G113500 Sobic003G240600 Sobic003G240600 Sobic001G325000--Sobic003G240600 Sobic009G164600 Sobic009G164600 Sobic001G325000--Sobic009G164600 Sobic001G317200 Sobic001G317200 Sobic001G325000--Sobic001G317200 Sobic001G325000--Sobic005G051200 Sobic007G057000 Sobic007G057000 Sobic001G325000--Sobic007G057000 Sobic004G216600 Sobic004G216600 Sobic001G325000--Sobic004G216600 Sobic009G183400 Sobic009G183400 Sobic001G325000--Sobic009G183400 Sobic002G414600 Sobic002G414600 Sobic001G325000--Sobic002G414600 Sobic008G050600 Sobic008G050600 Sobic001G325000--Sobic008G050600 Sobic007G170000--Sobic006G113500 Sobic007G170000--Sobic010G079600 Sobic007G170000--Sobic001G256200 Sobic004G148100 Sobic004G148100 Sobic007G170000--Sobic004G148100 Sobic002G040900 Sobic002G040900 Sobic007G170000--Sobic002G040900 Sobic007G170000--Sobic002G044800 Sobic007G170000--Sobic009G196400 Sobic001G462700 Sobic001G462700 Sobic007G170000--Sobic001G462700 Sobic007G204700 Sobic007G204700 Sobic007G170000--Sobic007G204700 Sobic001G243600--Sobic004G273400 Sobic005G213200 Sobic005G213200 Sobic001G243600--Sobic005G213200 Sobic001G243500 Sobic001G243500 Sobic001G243600--Sobic001G243500 Sobic001G100700 Sobic001G100700 Sobic001G243600--Sobic001G100700 Sobic001G243600--Sobic009G120000 Sobic002G375400 Sobic002G375400 Sobic001G243600--Sobic002G375400 Sobic009G106800 Sobic009G106800 Sobic001G243600--Sobic009G106800 Sobic005G084600 Sobic005G084600 Sobic001G243600--Sobic005G084600 Sobic001G243600--Sobic001G444400
Octagon: transcription factors


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