Gene annotation
Transcriptome id Sobic.010G079600.1
Synonym Sb10g006900
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Z6E5
Pfam -
Panther DB PTHR37707
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g10700.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G170000 - -
2 Sobic.003G364100 glycosyl hydrolase, putative, expressed K01183: chitinase
3 Sobic.002G044800 SAM dependent carboxyl methyltransferase, putative, expressed -
4 Sobic.001G256200 expressed protein -
5 Sobic.009G196400 expressed protein -
6 Sobic.004G333150 - -
7 Sobic.002G421800 Up-reguralion under drought(PubMedID : 24916767)@homeobox domain containing protein, expressed -
8 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
9 Sobic.006G113500 heavy metal associated domain containing protein, expressed -
10 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
11 Sobic.004G240600 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
12 Sobic.003G271500 expressed protein -
13 Sobic.004G239200 transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
14 Sobic.004G148100 Cupin domain containing protein, expressed -
15 Sobic.006G190700 - -
16 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
17 Sobic.001G297000 glycoprotein, putative, expressed -
18 Sobic.001G054500 expressed protein -
19 Sobic.002G040900 VQ domain containing protein, putative, expressed -
20 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic010G079600 Sobic010G079600 Sobic007G170000 Sobic007G170000 Sobic010G079600--Sobic007G170000 Sobic003G364100 Sobic003G364100 Sobic010G079600--Sobic003G364100 Sobic002G044800 Sobic002G044800 Sobic010G079600--Sobic002G044800 Sobic001G256200 Sobic001G256200 Sobic010G079600--Sobic001G256200 Sobic009G196400 Sobic009G196400 Sobic010G079600--Sobic009G196400 Sobic004G333150 Sobic004G333150 Sobic010G079600--Sobic004G333150 Sobic002G421800 Sobic002G421800 Sobic010G079600--Sobic002G421800 Sobic004G273400 Sobic004G273400 Sobic010G079600--Sobic004G273400 Sobic006G113500 Sobic006G113500 Sobic010G079600--Sobic006G113500 Sobic007G170000--Sobic006G113500 Sobic007G170000--Sobic010G079600 Sobic007G170000--Sobic001G256200 Sobic004G148100 Sobic004G148100 Sobic007G170000--Sobic004G148100 Sobic002G040900 Sobic002G040900 Sobic007G170000--Sobic002G040900 Sobic007G170000--Sobic002G044800 Sobic007G170000--Sobic009G196400 Sobic001G462700 Sobic001G462700 Sobic007G170000--Sobic001G462700 Sobic007G204700 Sobic007G204700 Sobic007G170000--Sobic007G204700 Sobic003G236450 Sobic003G236450 Sobic003G364100--Sobic003G236450 Sobic002G128300 Sobic002G128300 Sobic003G364100--Sobic002G128300 Sobic006G153100 Sobic006G153100 Sobic003G364100--Sobic006G153100 Sobic005G179200 Sobic005G179200 Sobic003G364100--Sobic005G179200 Sobic007G141500 Sobic007G141500 Sobic003G364100--Sobic007G141500 Sobic003G364100--Sobic010G079600 Sobic001G325000 Sobic001G325000 Sobic003G364100--Sobic001G325000 Sobic003G364100--Sobic007G170000 Sobic001G243600 Sobic001G243600 Sobic003G364100--Sobic001G243600 Sobic010G226400 Sobic010G226400 Sobic002G044800--Sobic010G226400 Sobic002G044800--Sobic004G333150 Sobic004G240600 Sobic004G240600 Sobic002G044800--Sobic004G240600 Sobic009G021900 Sobic009G021900 Sobic002G044800--Sobic009G021900 Sobic002G389301 Sobic002G389301 Sobic002G044800--Sobic002G389301 Sobic002G044800--Sobic002G040900 Sobic002G044800--Sobic009G196400 Sobic009G009700 Sobic009G009700 Sobic002G044800--Sobic009G009700 Sobic003G087300 Sobic003G087300 Sobic002G044800--Sobic003G087300 Sobic001G256200--Sobic002G040900 Sobic001G054500 Sobic001G054500 Sobic001G256200--Sobic001G054500 Sobic002G042000 Sobic002G042000 Sobic001G256200--Sobic002G042000 Sobic002G115025 Sobic002G115025 Sobic001G256200--Sobic002G115025 Sobic001G256200--Sobic004G148100 Sobic007G144501 Sobic007G144501 Sobic001G256200--Sobic007G144501 Sobic001G256200--Sobic006G113500 Sobic001G256200--Sobic009G009700 Sobic006G234900 Sobic006G234900 Sobic001G256200--Sobic006G234900 Sobic001G444400 Sobic001G444400 Sobic009G196400--Sobic001G444400 Sobic002G139300 Sobic002G139300 Sobic009G196400--Sobic002G139300 Sobic009G196400--Sobic006G153100 Sobic009G196400--Sobic002G421800 Sobic001G333400 Sobic001G333400 Sobic009G196400--Sobic001G333400 Sobic009G106800 Sobic009G106800 Sobic009G196400--Sobic009G106800 Sobic009G196400--Sobic004G240600 Sobic009G196400--Sobic003G087300 Sobic009G196400--Sobic007G141500 Sobic004G333150--Sobic004G240600 Sobic010G052700 Sobic010G052700 Sobic004G333150--Sobic010G052700 Sobic004G333150--Sobic003G087300 Sobic004G333150--Sobic009G106800 Sobic005G203100 Sobic005G203100 Sobic004G333150--Sobic005G203100 Sobic004G333150--Sobic004G273400 Sobic004G333150--Sobic002G421800 Sobic004G333150--Sobic009G196400 Sobic001G100700 Sobic001G100700 Sobic004G333150--Sobic001G100700 Sobic002G199650 Sobic002G199650 Sobic002G421800--Sobic002G199650 Sobic002G421800--Sobic001G444400 Sobic002G421800--Sobic009G196400 Sobic002G421800--Sobic007G141500 Sobic002G421800--Sobic003G087300 Sobic002G421800--Sobic006G153100 Sobic002G421800--Sobic010G052700 Sobic002G416600 Sobic002G416600 Sobic002G421800--Sobic002G416600 Sobic002G421800--Sobic001G333400 Sobic004G273400--Sobic001G243600 Sobic001G243500 Sobic001G243500 Sobic004G273400--Sobic001G243500 Sobic004G273400--Sobic001G100700 Sobic005G213200 Sobic005G213200 Sobic004G273400--Sobic005G213200 Sobic004G273400--Sobic009G106800 Sobic004G273400--Sobic001G444400 Sobic004G273400--Sobic006G153100 Sobic004G273400--Sobic004G333150 Sobic004G273400--Sobic007G141500 Sobic006G113500--Sobic004G148100 Sobic006G113500--Sobic002G040900 Sobic006G113500--Sobic001G054500 Sobic006G113500--Sobic001G256200 Sobic007G008100 Sobic007G008100 Sobic006G113500--Sobic007G008100 Sobic001G325400 Sobic001G325400 Sobic006G113500--Sobic001G325400 Sobic006G039100 Sobic006G039100 Sobic006G113500--Sobic006G039100 Sobic006G162100 Sobic006G162100 Sobic006G113500--Sobic006G162100 Sobic006G113500--Sobic002G042000
Octagon: transcription factors


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