Gene annotation
Transcriptome id Sobic.007G170000.1
Synonym
Functional annotation -
UniProt A0A1B6PI76
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g55430.1 : alginate regulatory protein AlgP, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU6Hr1G085880.5 , HORVU6Hr1G085880.3
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G113500 heavy metal associated domain containing protein, expressed -
2 Sobic.010G079600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G256200 expressed protein -
4 Sobic.004G148100 Cupin domain containing protein, expressed -
5 Sobic.002G040900 VQ domain containing protein, putative, expressed -
6 Sobic.002G044800 SAM dependent carboxyl methyltransferase, putative, expressed -
7 Sobic.009G196400 expressed protein -
8 Sobic.001G462700 expressed protein -
9 Sobic.007G204700 expressed protein -
10 Sobic.003G364100 glycosyl hydrolase, putative, expressed K01183: chitinase
11 Sobic.004G239200 transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
12 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
13 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
14 Sobic.004G240600 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
15 Sobic.001G487400 expressed protein -
16 Sobic.001G054500 expressed protein -
17 Sobic.006G162100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glyoxalase family protein, putative, expressed -
18 Sobic.010G226400 expressed protein -
19 Sobic.007G215600 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
20 Sobic.006G039100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed -


Gene co-expression network
sample Sobic007G170000 Sobic007G170000 Sobic006G113500 Sobic006G113500 Sobic007G170000--Sobic006G113500 Sobic010G079600 Sobic010G079600 Sobic007G170000--Sobic010G079600 Sobic001G256200 Sobic001G256200 Sobic007G170000--Sobic001G256200 Sobic004G148100 Sobic004G148100 Sobic007G170000--Sobic004G148100 Sobic002G040900 Sobic002G040900 Sobic007G170000--Sobic002G040900 Sobic002G044800 Sobic002G044800 Sobic007G170000--Sobic002G044800 Sobic009G196400 Sobic009G196400 Sobic007G170000--Sobic009G196400 Sobic001G462700 Sobic001G462700 Sobic007G170000--Sobic001G462700 Sobic007G204700 Sobic007G204700 Sobic007G170000--Sobic007G204700 Sobic006G113500--Sobic004G148100 Sobic006G113500--Sobic002G040900 Sobic001G054500 Sobic001G054500 Sobic006G113500--Sobic001G054500 Sobic006G113500--Sobic001G256200 Sobic007G008100 Sobic007G008100 Sobic006G113500--Sobic007G008100 Sobic001G325400 Sobic001G325400 Sobic006G113500--Sobic001G325400 Sobic006G039100 Sobic006G039100 Sobic006G113500--Sobic006G039100 Sobic006G162100 Sobic006G162100 Sobic006G113500--Sobic006G162100 Sobic002G042000 Sobic002G042000 Sobic006G113500--Sobic002G042000 Sobic010G079600--Sobic007G170000 Sobic003G364100 Sobic003G364100 Sobic010G079600--Sobic003G364100 Sobic010G079600--Sobic002G044800 Sobic010G079600--Sobic001G256200 Sobic010G079600--Sobic009G196400 Sobic004G333150 Sobic004G333150 Sobic010G079600--Sobic004G333150 Sobic002G421800 Sobic002G421800 Sobic010G079600--Sobic002G421800 Sobic004G273400 Sobic004G273400 Sobic010G079600--Sobic004G273400 Sobic010G079600--Sobic006G113500 Sobic001G256200--Sobic002G040900 Sobic001G256200--Sobic001G054500 Sobic001G256200--Sobic002G042000 Sobic002G115025 Sobic002G115025 Sobic001G256200--Sobic002G115025 Sobic001G256200--Sobic004G148100 Sobic007G144501 Sobic007G144501 Sobic001G256200--Sobic007G144501 Sobic001G256200--Sobic006G113500 Sobic009G009700 Sobic009G009700 Sobic001G256200--Sobic009G009700 Sobic006G234900 Sobic006G234900 Sobic001G256200--Sobic006G234900 Sobic004G148100--Sobic002G040900 Sobic004G148100--Sobic006G162100 Sobic004G148100--Sobic006G113500 Sobic005G177600 Sobic005G177600 Sobic004G148100--Sobic005G177600 Sobic007G215600 Sobic007G215600 Sobic004G148100--Sobic007G215600 Sobic004G148100--Sobic001G054500 Sobic004G148100--Sobic006G039100 Sobic004G148100--Sobic002G042000 Sobic004G148100--Sobic007G008100 Sobic002G040900--Sobic004G148100 Sobic002G040900--Sobic001G054500 Sobic002G040900--Sobic001G256200 Sobic002G040900--Sobic002G042000 Sobic002G040900--Sobic006G113500 Sobic002G040900--Sobic007G008100 Sobic002G040900--Sobic005G177600 Sobic002G040900--Sobic006G162100 Sobic002G040900--Sobic007G144501 Sobic010G226400 Sobic010G226400 Sobic002G044800--Sobic010G226400 Sobic002G044800--Sobic004G333150 Sobic004G240600 Sobic004G240600 Sobic002G044800--Sobic004G240600 Sobic009G021900 Sobic009G021900 Sobic002G044800--Sobic009G021900 Sobic002G389301 Sobic002G389301 Sobic002G044800--Sobic002G389301 Sobic002G044800--Sobic002G040900 Sobic002G044800--Sobic009G196400 Sobic002G044800--Sobic009G009700 Sobic003G087300 Sobic003G087300 Sobic002G044800--Sobic003G087300 Sobic001G444400 Sobic001G444400 Sobic009G196400--Sobic001G444400 Sobic002G139300 Sobic002G139300 Sobic009G196400--Sobic002G139300 Sobic006G153100 Sobic006G153100 Sobic009G196400--Sobic006G153100 Sobic009G196400--Sobic002G421800 Sobic001G333400 Sobic001G333400 Sobic009G196400--Sobic001G333400 Sobic009G106800 Sobic009G106800 Sobic009G196400--Sobic009G106800 Sobic009G196400--Sobic004G240600 Sobic009G196400--Sobic003G087300 Sobic007G141500 Sobic007G141500 Sobic009G196400--Sobic007G141500 Sobic002G247600 Sobic002G247600 Sobic001G462700--Sobic002G247600 Sobic001G462700--Sobic001G325400 Sobic001G462700--Sobic006G039100 Sobic009G111000 Sobic009G111000 Sobic001G462700--Sobic009G111000 Sobic001G462700--Sobic007G204700 Sobic003G117600 Sobic003G117600 Sobic001G462700--Sobic003G117600 Sobic010G008400 Sobic010G008400 Sobic001G462700--Sobic010G008400 Sobic001G331200 Sobic001G331200 Sobic001G462700--Sobic001G331200 Sobic004G046200 Sobic004G046200 Sobic001G462700--Sobic004G046200 Sobic006G158400 Sobic006G158400 Sobic007G204700--Sobic006G158400 Sobic007G204700--Sobic001G462700 Sobic010G158500 Sobic010G158500 Sobic007G204700--Sobic010G158500 Sobic008G127933 Sobic008G127933 Sobic007G204700--Sobic008G127933 Sobic001G237900 Sobic001G237900 Sobic007G204700--Sobic001G237900 Sobic005G215400 Sobic005G215400 Sobic007G204700--Sobic005G215400 Sobic004G202400 Sobic004G202400 Sobic007G204700--Sobic004G202400 Sobic008G128200 Sobic008G128200 Sobic007G204700--Sobic008G128200 Sobic004G348800 Sobic004G348800 Sobic007G204700--Sobic004G348800
Octagon: transcription factors


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