Gene annotation
Transcriptome id Sobic.008G133900.1
Synonym Sb08g018585
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6PDI2
Pfam PF08224
Panther DB PTHR33377 PTHR33377:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g02960.3 : expressed protein
MaizeGDB (Corn) Zm00025a004211
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G189100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
2 Sobic.004G241100 NHL repeat-containing protein, putative, expressed -
3 Sobic.007G181500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Dehydration-responsive element binding 1 A(PubMedID : 26320239)@Up-reguralion under heat(PubMedID : 24916767)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
4 Sobic.002G245200 beta-expansin precursor, putative, expressed -
5 Sobic.004G280000 Hydroxyjasmonate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
6 Sobic.001G206600 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
7 Sobic.002G333900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CSLF4 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
8 Sobic.009G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
9 Sobic.005G039100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G466000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
11 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
12 Sobic.002G423300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.001G279350 - -
14 Sobic.003G268800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
15 Sobic.006G230500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
16 Sobic.002G282300 expressed protein -
17 Sobic.003G233000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
18 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
19 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
20 Sobic.004G243000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic008G133900 Sobic008G133900 Sobic004G189100 Sobic004G189100 Sobic008G133900--Sobic004G189100 Sobic004G241100 Sobic004G241100 Sobic008G133900--Sobic004G241100 Sobic007G181500 Sobic007G181500 Sobic008G133900--Sobic007G181500 Sobic002G245200 Sobic002G245200 Sobic008G133900--Sobic002G245200 Sobic004G280000 Sobic004G280000 Sobic008G133900--Sobic004G280000 Sobic001G206600 Sobic001G206600 Sobic008G133900--Sobic001G206600 Sobic002G333900 Sobic002G333900 Sobic008G133900--Sobic002G333900 Sobic009G200700 Sobic009G200700 Sobic008G133900--Sobic009G200700 Sobic005G039100 Sobic005G039100 Sobic008G133900--Sobic005G039100 Sobic002G348500 Sobic002G348500 Sobic004G189100--Sobic002G348500 Sobic004G189100--Sobic008G133900 Sobic004G189100--Sobic004G241100 Sobic002G328300 Sobic002G328300 Sobic004G189100--Sobic002G328300 Sobic009G065500 Sobic009G065500 Sobic004G189100--Sobic009G065500 Sobic003G265200 Sobic003G265200 Sobic004G189100--Sobic003G265200 Sobic003G303100 Sobic003G303100 Sobic004G189100--Sobic003G303100 Sobic002G361001 Sobic002G361001 Sobic004G189100--Sobic002G361001 Sobic006G121500 Sobic006G121500 Sobic004G189100--Sobic006G121500 Sobic004G169200 Sobic004G169200 Sobic004G241100--Sobic004G169200 Sobic003G428700 Sobic003G428700 Sobic004G241100--Sobic003G428700 Sobic006G263600 Sobic006G263600 Sobic004G241100--Sobic006G263600 Sobic009G036000 Sobic009G036000 Sobic004G241100--Sobic009G036000 Sobic001G035100 Sobic001G035100 Sobic004G241100--Sobic001G035100 Sobic001G259600 Sobic001G259600 Sobic004G241100--Sobic001G259600 Sobic003G364600 Sobic003G364600 Sobic004G241100--Sobic003G364600 Sobic003G339500 Sobic003G339500 Sobic004G241100--Sobic003G339500 Sobic010G209200 Sobic010G209200 Sobic004G241100--Sobic010G209200 Sobic001G425600 Sobic001G425600 Sobic007G181500--Sobic001G425600 Sobic001G425500 Sobic001G425500 Sobic007G181500--Sobic001G425500 Sobic004G109700 Sobic004G109700 Sobic007G181500--Sobic004G109700 Sobic009G194400 Sobic009G194400 Sobic007G181500--Sobic009G194400 Sobic003G323201 Sobic003G323201 Sobic007G181500--Sobic003G323201 Sobic010G196600 Sobic010G196600 Sobic007G181500--Sobic010G196600 Sobic004G109600 Sobic004G109600 Sobic007G181500--Sobic004G109600 Sobic001G279350 Sobic001G279350 Sobic007G181500--Sobic001G279350 Sobic002G250900 Sobic002G250900 Sobic007G181500--Sobic002G250900 Sobic001G187500 Sobic001G187500 Sobic002G245200--Sobic001G187500 Sobic002G245200--Sobic001G425500 Sobic002G245200--Sobic001G425600 Sobic002G245200--Sobic001G279350 Sobic002G369301 Sobic002G369301 Sobic002G245200--Sobic002G369301 Sobic006G207000 Sobic006G207000 Sobic002G245200--Sobic006G207000 Sobic004G251800 Sobic004G251800 Sobic002G245200--Sobic004G251800 Sobic002G245200--Sobic004G109700 Sobic004G086400 Sobic004G086400 Sobic002G245200--Sobic004G086400 Sobic004G108200 Sobic004G108200 Sobic004G280000--Sobic004G108200 Sobic009G224100 Sobic009G224100 Sobic004G280000--Sobic009G224100 Sobic006G075400 Sobic006G075400 Sobic004G280000--Sobic006G075400 Sobic004G156000 Sobic004G156000 Sobic004G280000--Sobic004G156000 Sobic004G243100 Sobic004G243100 Sobic004G280000--Sobic004G243100 Sobic007G017500 Sobic007G017500 Sobic004G280000--Sobic007G017500 Sobic001G195200 Sobic001G195200 Sobic004G280000--Sobic001G195200 Sobic002G234400 Sobic002G234400 Sobic004G280000--Sobic002G234400 Sobic009G183900 Sobic009G183900 Sobic004G280000--Sobic009G183900 Sobic005G013400 Sobic005G013400 Sobic001G206600--Sobic005G013400 Sobic009G123733 Sobic009G123733 Sobic001G206600--Sobic009G123733 Sobic001G026950 Sobic001G026950 Sobic001G206600--Sobic001G026950 Sobic001G206600--Sobic004G251800 Sobic003G370600 Sobic003G370600 Sobic001G206600--Sobic003G370600 Sobic001G143100 Sobic001G143100 Sobic001G206600--Sobic001G143100 Sobic005G013500 Sobic005G013500 Sobic001G206600--Sobic005G013500 Sobic006G170000 Sobic006G170000 Sobic001G206600--Sobic006G170000 Sobic001G206600--Sobic002G250900 Sobic001G401300 Sobic001G401300 Sobic002G333900--Sobic001G401300 Sobic008G034500 Sobic008G034500 Sobic002G333900--Sobic008G034500 Sobic001G247900 Sobic001G247900 Sobic002G333900--Sobic001G247900 Sobic006G196200 Sobic006G196200 Sobic002G333900--Sobic006G196200 Sobic003G152100 Sobic003G152100 Sobic002G333900--Sobic003G152100 Sobic001G466000 Sobic001G466000 Sobic002G333900--Sobic001G466000 Sobic001G400700 Sobic001G400700 Sobic002G333900--Sobic001G400700 Sobic002G333900--Sobic002G328300 Sobic001G401200 Sobic001G401200 Sobic002G333900--Sobic001G401200 Sobic002G140300 Sobic002G140300 Sobic009G200700--Sobic002G140300 Sobic009G036100 Sobic009G036100 Sobic009G200700--Sobic009G036100 Sobic003G324400 Sobic003G324400 Sobic009G200700--Sobic003G324400 Sobic002G356101 Sobic002G356101 Sobic009G200700--Sobic002G356101 Sobic006G165100 Sobic006G165100 Sobic009G200700--Sobic006G165100 Sobic001G040200 Sobic001G040200 Sobic009G200700--Sobic001G040200 Sobic009G129000 Sobic009G129000 Sobic009G200700--Sobic009G129000 Sobic006G230500 Sobic006G230500 Sobic009G200700--Sobic006G230500 Sobic001G258300 Sobic001G258300 Sobic009G200700--Sobic001G258300 Sobic001G320900 Sobic001G320900 Sobic005G039100--Sobic001G320900 Sobic005G039100--Sobic009G036000 Sobic009G169000 Sobic009G169000 Sobic005G039100--Sobic009G169000 Sobic004G280200 Sobic004G280200 Sobic005G039100--Sobic004G280200 Sobic003G387000 Sobic003G387000 Sobic005G039100--Sobic003G387000 Sobic005G039100--Sobic009G036100 Sobic005G039100--Sobic006G230500 Sobic003G334600 Sobic003G334600 Sobic005G039100--Sobic003G334600 Sobic003G148600 Sobic003G148600 Sobic005G039100--Sobic003G148600
Octagon: transcription factors


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