Gene annotation
Transcriptome id Sobic.002G321800.2
Synonym Sb02g034975
Functional annotation 60S ribosomal protein L44, putative, expressed
UniProt A0A1W0W6K3
Pfam PF00935
Panther DB PTHR10369 PTHR10369:SF3
NCBI CDD KOG3464; 60S ribosomal protein L44
KEGG Orthology K02929; RP-L44e, large subunit ribosomal protein L44e
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT4G14320 : Zinc-binding ribosomal protein family protein
RAP-DB (Rice) LOC_Os07g33860.1 : 60S ribosomal protein L44, putative, expressed
MaizeGDB (Corn) Zm00025a045836 , Zm00025a048238 , Zm00025a014812
Brachypodium KQK16439 , KQK16438 , KQK15959 , KQK15960 , PNT75218 , PNT75217 , KQK16440
Barley HORVU2Hr1G045920.1 , HORVU2Hr1G045920.2 , HORVU2Hr1G045920.3 , HORVU7Hr1G104300.1 , HORVU7Hr1G104300.3 , HORVU7Hr1G104300.2 , HORVU5Hr1G101600.4 , HORVU5Hr1G081590.1 , HORVU5Hr1G101600.1 , HORVU5Hr1G101600.3 , HORVU5Hr1G101600.2
Wheat TraesCS7D02G443900 , TraesCS5A02G320100 , TraesCS5D02G326000 , TraesCS5D02G326000 , TraesCS5D02G425600 , TraesCS7A02G454700 , TraesCS4A02G182600 , TraesCS5A02G417600 , TraesCS5B02G320300 , TraesCS5B02G419800 , TraesCS5B02G419800 , TraesCS7A02G454800
Populus PNT35766 , PNT35765 , PNT27573 , PNT27572


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G133600 - -
2 Sobic.001G053200 expressed protein -
3 Sobic.009G248801 - -
4 Sobic.002G118101 - -
5 Sobic.004G086150 - -
6 Sobic.003G160100 - -
7 Sobic.004G253700 - -
8 Sobic.008G122100 - -
9 Sobic.001G000501 - -
10 Sobic.005G089400 - -
11 Sobic.007G010700 OsFBL6 - F-box domain and LRR containing protein, expressed -
12 Sobic.005G053200 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
13 Sobic.001G223550 - -
14 Sobic.004G070500 expressed protein -
15 Sobic.004G325100 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
16 Sobic.008G101100 powdery mildew resistance protein PM3A, putative, expressed -
17 Sobic.009G123900 L1P family of ribosomal proteins domain containing protein, expressed K02863: RP-L1, MRPL1, large subunit ribosomal protein L1
18 Sobic.002G017500 expressed protein -
19 Sobic.009G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
20 Sobic.008G089800 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -


Gene co-expression network
sample Sobic002G321800 Sobic002G321800 Sobic005G133600 Sobic005G133600 Sobic002G321800--Sobic005G133600 Sobic001G053200 Sobic001G053200 Sobic002G321800--Sobic001G053200 Sobic009G248801 Sobic009G248801 Sobic002G321800--Sobic009G248801 Sobic002G118101 Sobic002G118101 Sobic002G321800--Sobic002G118101 Sobic004G086150 Sobic004G086150 Sobic002G321800--Sobic004G086150 Sobic003G160100 Sobic003G160100 Sobic002G321800--Sobic003G160100 Sobic004G253700 Sobic004G253700 Sobic002G321800--Sobic004G253700 Sobic008G122100 Sobic008G122100 Sobic002G321800--Sobic008G122100 Sobic001G000501 Sobic001G000501 Sobic002G321800--Sobic001G000501 Sobic001G223550 Sobic001G223550 Sobic005G133600--Sobic001G223550 Sobic005G133600--Sobic009G248801 Sobic008G101100 Sobic008G101100 Sobic005G133600--Sobic008G101100 Sobic005G133600--Sobic004G253700 Sobic005G133600--Sobic003G160100 Sobic007G185300 Sobic007G185300 Sobic005G133600--Sobic007G185300 Sobic007G090403 Sobic007G090403 Sobic005G133600--Sobic007G090403 Sobic007G010700 Sobic007G010700 Sobic005G133600--Sobic007G010700 Sobic005G095000 Sobic005G095000 Sobic005G133600--Sobic005G095000 Sobic004G034600 Sobic004G034600 Sobic001G053200--Sobic004G034600 Sobic001G053200--Sobic005G133600 Sobic001G053200--Sobic001G223550 Sobic003G174301 Sobic003G174301 Sobic001G053200--Sobic003G174301 Sobic002G249300 Sobic002G249300 Sobic001G053200--Sobic002G249300 Sobic001G053200--Sobic002G321800 Sobic005G149700 Sobic005G149700 Sobic001G053200--Sobic005G149700 Sobic006G175800 Sobic006G175800 Sobic001G053200--Sobic006G175800 Sobic001G053200--Sobic003G160100 Sobic009G248801--Sobic004G086150 Sobic002G244200 Sobic002G244200 Sobic009G248801--Sobic002G244200 Sobic009G248801--Sobic003G160100 Sobic009G248801--Sobic005G095000 Sobic007G202300 Sobic007G202300 Sobic009G248801--Sobic007G202300 Sobic009G248801--Sobic005G133600 Sobic009G248801--Sobic008G101100 Sobic009G248801--Sobic007G090403 Sobic008G166550 Sobic008G166550 Sobic009G248801--Sobic008G166550 Sobic002G118101--Sobic001G053200 Sobic002G118101--Sobic002G321800 Sobic008G089800 Sobic008G089800 Sobic002G118101--Sobic008G089800 Sobic008G027200 Sobic008G027200 Sobic002G118101--Sobic008G027200 Sobic004G044900 Sobic004G044900 Sobic002G118101--Sobic004G044900 Sobic007G084300 Sobic007G084300 Sobic002G118101--Sobic007G084300 Sobic003G080800 Sobic003G080800 Sobic002G118101--Sobic003G080800 Sobic002G017500 Sobic002G017500 Sobic002G118101--Sobic002G017500 Sobic001G413000 Sobic001G413000 Sobic002G118101--Sobic001G413000 Sobic004G086150--Sobic009G248801 Sobic004G086150--Sobic003G160100 Sobic004G086150--Sobic002G244200 Sobic004G086150--Sobic005G095000 Sobic002G196600 Sobic002G196600 Sobic004G086150--Sobic002G196600 Sobic005G068700 Sobic005G068700 Sobic004G086150--Sobic005G068700 Sobic009G123900 Sobic009G123900 Sobic004G086150--Sobic009G123900 Sobic004G086150--Sobic007G090403 Sobic004G175400 Sobic004G175400 Sobic004G086150--Sobic004G175400 Sobic003G160100--Sobic005G095000 Sobic003G160100--Sobic004G086150 Sobic004G006800 Sobic004G006800 Sobic003G160100--Sobic004G006800 Sobic003G160100--Sobic009G248801 Sobic003G160100--Sobic002G244200 Sobic002G379750 Sobic002G379750 Sobic003G160100--Sobic002G379750 Sobic003G160100--Sobic007G090403 Sobic003G160100--Sobic005G133600 Sobic007G133000 Sobic007G133000 Sobic003G160100--Sobic007G133000 Sobic004G253700--Sobic008G101100 Sobic005G089400 Sobic005G089400 Sobic004G253700--Sobic005G089400 Sobic004G253700--Sobic008G122100 Sobic004G253700--Sobic005G133600 Sobic004G253700--Sobic007G010700 Sobic004G253700--Sobic001G000501 Sobic004G253700--Sobic009G248801 Sobic003G416000 Sobic003G416000 Sobic004G253700--Sobic003G416000 Sobic008G105366 Sobic008G105366 Sobic004G253700--Sobic008G105366 Sobic008G122100--Sobic004G253700 Sobic008G122100--Sobic008G101100 Sobic008G122100--Sobic009G248801 Sobic008G122100--Sobic005G089400 Sobic001G459600 Sobic001G459600 Sobic008G122100--Sobic001G459600 Sobic008G122100--Sobic001G000501 Sobic008G122100--Sobic002G017500 Sobic008G122100--Sobic005G133600 Sobic008G088833 Sobic008G088833 Sobic008G122100--Sobic008G088833 Sobic001G000501--Sobic001G459600 Sobic001G000700 Sobic001G000700 Sobic001G000501--Sobic001G000700 Sobic001G000501--Sobic005G089400 Sobic001G000501--Sobic007G010700 Sobic008G084300 Sobic008G084300 Sobic001G000501--Sobic008G084300 Sobic001G000501--Sobic005G149700 Sobic001G000501--Sobic004G034600 Sobic005G053200 Sobic005G053200 Sobic001G000501--Sobic005G053200 Sobic001G000501--Sobic004G253700
Octagon: transcription factors


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