Gene annotation
Transcriptome id Sobic.002G323700.1,Sobic.002G323700.2,Sobic.002G323700.3
Synonym ATSYP131, SYP131, Sb02g035120
Functional annotation syntaxin, putative, expressed
UniProt C5XA38
Pfam PF05739 PF00804
Panther DB PTHR19957 PTHR19957:SF131
NCBI CDD KOG0810; SNARE protein Syntaxin 1 and related proteins
KEGG Orthology K08486; syntaxin 1B/2/3
Gene Ontology GO:0005515; protein binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT3G03800 : syntaxin of plants 131
RAP-DB (Rice) LOC_Os07g07000.1 : syntaxin, putative, expressed
MaizeGDB (Corn) Zm00025a048254
Brachypodium PNT74988 , KQK15931 , KQK15930
Barley HORVU2Hr1G045350.3 , HORVU2Hr1G045350.2 , HORVU2Hr1G045350.1
Wheat TraesCS2A02G219200 , TraesCS2D02G224100 , TraesCS2B02G244700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G226600 - -
2 Sobic.001G439200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
3 Sobic.003G266500 Phosphoethanolamine N-methyltransferase XPL1 (At)(PubMedID : 27208977)@CPuORF25 - conserved peptide uORF-containing transcript, expressed K05929: E2.1.1.103, phosphoethanolamine N-methyltransferase
4 Sobic.002G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.007G058200 - -
6 Sobic.006G026600 expressed protein -
7 Sobic.008G104601 - -
8 Sobic.001G302200 glycosyl transferase 8 domain containing protein, putative, expressed -
9 Sobic.004G073500 "domain confirmed by Pfam database, expressed in leaf, flower and root, expression induced by BR treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
10 Sobic.007G189700 - -
11 Sobic.006G220800 -(PubMedID : 26976818)@aminomethyltransferase, putative, expressed K00605: gcvT, aminomethyltransferase
12 Sobic.005G037300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter, major facilitator family, putative, expressed -
13 Sobic.003G131600 major facilitator superfamily antiporter, putative, expressed -
14 Sobic.001G406000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.13 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
15 Sobic.005G217900 carboxyl-terminal peptidase, putative, expressed -
16 Sobic.003G256700 expressed protein -
17 Sobic.006G244000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
18 Sobic.001G098600 expressed protein -
19 Sobic.004G035601 - -
20 Sobic.001G292700 crcB-like protein, expressed -


Gene co-expression network
sample Sobic002G323700 Sobic002G323700 Sobic010G226600 Sobic010G226600 Sobic002G323700--Sobic010G226600 Sobic001G439200 Sobic001G439200 Sobic002G323700--Sobic001G439200 Sobic003G266500 Sobic003G266500 Sobic002G323700--Sobic003G266500 Sobic002G214300 Sobic002G214300 Sobic002G323700--Sobic002G214300 Sobic007G058200 Sobic007G058200 Sobic002G323700--Sobic007G058200 Sobic006G026600 Sobic006G026600 Sobic002G323700--Sobic006G026600 Sobic008G104601 Sobic008G104601 Sobic002G323700--Sobic008G104601 Sobic001G302200 Sobic001G302200 Sobic002G323700--Sobic001G302200 Sobic004G073500 Sobic004G073500 Sobic002G323700--Sobic004G073500 Sobic009G222200 Sobic009G222200 Sobic010G226600--Sobic009G222200 Sobic007G189700 Sobic007G189700 Sobic010G226600--Sobic007G189700 Sobic010G226600--Sobic008G104601 Sobic001G189100 Sobic001G189100 Sobic010G226600--Sobic001G189100 Sobic010G030800 Sobic010G030800 Sobic010G226600--Sobic010G030800 Sobic003G237600 Sobic003G237600 Sobic010G226600--Sobic003G237600 Sobic005G202600 Sobic005G202600 Sobic010G226600--Sobic005G202600 Sobic004G035700 Sobic004G035700 Sobic010G226600--Sobic004G035700 Sobic001G439200--Sobic003G266500 Sobic001G439200--Sobic007G189700 Sobic003G256700 Sobic003G256700 Sobic001G439200--Sobic003G256700 Sobic003G431900 Sobic003G431900 Sobic001G439200--Sobic003G431900 Sobic001G439200--Sobic004G073500 Sobic003G199800 Sobic003G199800 Sobic001G439200--Sobic003G199800 Sobic001G011700 Sobic001G011700 Sobic001G439200--Sobic001G011700 Sobic001G406000 Sobic001G406000 Sobic001G439200--Sobic001G406000 Sobic009G104800 Sobic009G104800 Sobic001G439200--Sobic009G104800 Sobic003G266500--Sobic001G439200 Sobic002G324500 Sobic002G324500 Sobic003G266500--Sobic002G324500 Sobic003G266500--Sobic004G073500 Sobic003G266500--Sobic003G256700 Sobic006G244000 Sobic006G244000 Sobic003G266500--Sobic006G244000 Sobic003G234200 Sobic003G234200 Sobic003G266500--Sobic003G234200 Sobic004G125700 Sobic004G125700 Sobic003G266500--Sobic004G125700 Sobic004G317500 Sobic004G317500 Sobic003G266500--Sobic004G317500 Sobic003G266500--Sobic009G104800 Sobic004G353700 Sobic004G353700 Sobic002G214300--Sobic004G353700 Sobic002G214300--Sobic001G406000 Sobic003G234400 Sobic003G234400 Sobic002G214300--Sobic003G234400 Sobic002G214300--Sobic007G189700 Sobic002G214300--Sobic003G237600 Sobic003G231800 Sobic003G231800 Sobic002G214300--Sobic003G231800 Sobic003G036100 Sobic003G036100 Sobic002G214300--Sobic003G036100 Sobic002G214300--Sobic001G189100 Sobic001G297400 Sobic001G297400 Sobic007G058200--Sobic001G297400 Sobic001G098600 Sobic001G098600 Sobic007G058200--Sobic001G098600 Sobic007G058200--Sobic003G237600 Sobic005G037300 Sobic005G037300 Sobic007G058200--Sobic005G037300 Sobic009G254600 Sobic009G254600 Sobic007G058200--Sobic009G254600 Sobic007G058200--Sobic004G035700 Sobic001G068400 Sobic001G068400 Sobic007G058200--Sobic001G068400 Sobic007G058200--Sobic001G189100 Sobic009G244300 Sobic009G244300 Sobic006G026600--Sobic009G244300 Sobic006G026600--Sobic002G214300 Sobic006G026600--Sobic003G231800 Sobic006G220800 Sobic006G220800 Sobic006G026600--Sobic006G220800 Sobic007G034300 Sobic007G034300 Sobic006G026600--Sobic007G034300 Sobic009G190500 Sobic009G190500 Sobic006G026600--Sobic009G190500 Sobic004G267000 Sobic004G267000 Sobic006G026600--Sobic004G267000 Sobic005G016500 Sobic005G016500 Sobic006G026600--Sobic005G016500 Sobic009G244600 Sobic009G244600 Sobic006G026600--Sobic009G244600 Sobic008G104601--Sobic006G244000 Sobic008G104601--Sobic007G034300 Sobic001G520800 Sobic001G520800 Sobic008G104601--Sobic001G520800 Sobic001G329400 Sobic001G329400 Sobic008G104601--Sobic001G329400 Sobic008G104601--Sobic003G431900 Sobic008G104601--Sobic003G256700 Sobic008G104601--Sobic004G125700 Sobic006G051300 Sobic006G051300 Sobic008G104601--Sobic006G051300 Sobic008G104601--Sobic009G104800 Sobic004G136600 Sobic004G136600 Sobic001G302200--Sobic004G136600 Sobic003G243600 Sobic003G243600 Sobic001G302200--Sobic003G243600 Sobic002G339600 Sobic002G339600 Sobic001G302200--Sobic002G339600 Sobic003G349200 Sobic003G349200 Sobic001G302200--Sobic003G349200 Sobic007G033800 Sobic007G033800 Sobic001G302200--Sobic007G033800 Sobic001G302200--Sobic004G317500 Sobic003G277600 Sobic003G277600 Sobic001G302200--Sobic003G277600 Sobic001G302200--Sobic003G266500 Sobic010G023700 Sobic010G023700 Sobic001G302200--Sobic010G023700 Sobic004G073500--Sobic003G266500 Sobic004G097000 Sobic004G097000 Sobic004G073500--Sobic004G097000 Sobic004G073500--Sobic001G439200 Sobic010G019700 Sobic010G019700 Sobic004G073500--Sobic010G019700 Sobic008G186400 Sobic008G186400 Sobic004G073500--Sobic008G186400 Sobic008G068200 Sobic008G068200 Sobic004G073500--Sobic008G068200 Sobic004G073500--Sobic010G023700 Sobic006G147300 Sobic006G147300 Sobic004G073500--Sobic006G147300 Sobic004G073500--Sobic003G431900
Octagon: transcription factors


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