Gene annotation
Transcriptome id Sobic.004G073500.3,Sobic.004G073500.2,Sobic.004G073500.1
Synonym SbPGP11, P-glycoprotein, Sb04g006090
Functional annotation "domain confirmed by Pfam database, expressed in leaf, flower and root, expression induced by BR treatment" (PubMedID : 20528920)
multidrug resistance protein, putative, expressed
UniProt A0A1Z5RLT8 , A0A1Z5RLC0 , C5XX25
Pfam PF00005 PF00664
Panther DB PTHR24221 PTHR24221:SF141
NCBI CDD -
KEGG Orthology K05658; ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016021integral component of membrane GO:0006810transport


Orthologs (automatic annotation)
TAIR AT3G28345 : ABC transporter family protein
RAP-DB (Rice) LOC_Os02g09720.1 : multidrug resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a034701 , Zm00025a020627
Brachypodium KQJ93765 , KQJ93764
Barley HORVU6Hr1G035040.14 , HORVU6Hr1G035040.10 , HORVU6Hr1G035040.11 , HORVU6Hr1G035040.4 , HORVU6Hr1G035040.1 , HORVU6Hr1G035040.2 , HORVU6Hr1G035040.3 , HORVU6Hr1G035040.8 , HORVU6Hr1G035040.9 , HORVU6Hr1G035040.16 , HORVU6Hr1G035040.17 , HORVU6Hr1G035040.15 , HORVU6Hr1G035040.12
Wheat TraesCS4A02G370600 , TraesCS6D02G161200 , TraesCS6D02G161200 , TraesCS6A02G171800 , TraesCS6B02G199700 , TraesCS7D02G068400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G266500 Phosphoethanolamine N-methyltransferase XPL1 (At)(PubMedID : 27208977)@CPuORF25 - conserved peptide uORF-containing transcript, expressed K05929: E2.1.1.103, phosphoethanolamine N-methyltransferase
2 Sobic.004G097000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@F-box family protein, putative, expressed -
3 Sobic.001G439200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
4 Sobic.010G019700 cytochrome P450 86A1, putative, expressed -
5 Sobic.008G186400 Leucine-rich repeat transmembrane protein kinase family protein(PubMedID : 26465154)@receptor-like protein kinase HAIKU2 precursor, putative, expressed -
6 Sobic.008G068200 amino acid transporter, putative, expressed -
7 Sobic.010G023700 Transketolase(PubMedID : 26186930)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
8 Sobic.006G147300 -(PubMedID : 26465154)@expressed protein -
9 Sobic.003G431900 -(PubMedID : 26976818)@expressed protein K07562: nonsense-mediated mRNA decay protein 3
10 Sobic.004G026700 down-regulated TF in developmental senescence(PubMedID : 27586543)@transcription factor, putative, expressed K09060: plant G-box-binding factor
11 Sobic.002G036000 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
12 Sobic.006G220800 -(PubMedID : 26976818)@aminomethyltransferase, putative, expressed K00605: gcvT, aminomethyltransferase
13 Sobic.008G053200 fructose-bisphosphate aldolase 2(PubMedID : 26465154)@fructose-bisphosphate aldolase 2("PubMedID : 26759170,PubMedID : 24597475")@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
14 Sobic.004G270600 MYB family transcription factor, putative, expressed -
15 Sobic.005G126300 expressed protein -
16 Sobic.003G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
17 Sobic.003G256700 expressed protein -
18 Sobic.002G324500 PPDK regulatory protein(PubMedID : 26465154)@PPDK regulatory protein(PubMedID : 26465154)@-(PubMedID : 26976818)@pyruvate orthophosphate dikinase regulatory protein(PubMedID : 27016024)@pyruvate Pi dikinase regulatory protein, putative, expressed K09773: [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
19 Sobic.001G011700 aspartokinase, chloroplast precursor, putative, expressed K00928: aspartate kinase
20 Sobic.004G125700 isochorismatase family protein, putative, expressed -


Gene co-expression network
sample Sobic004G073500 Sobic004G073500 Sobic003G266500 Sobic003G266500 Sobic004G073500--Sobic003G266500 Sobic004G097000 Sobic004G097000 Sobic004G073500--Sobic004G097000 Sobic001G439200 Sobic001G439200 Sobic004G073500--Sobic001G439200 Sobic010G019700 Sobic010G019700 Sobic004G073500--Sobic010G019700 Sobic008G186400 Sobic008G186400 Sobic004G073500--Sobic008G186400 Sobic008G068200 Sobic008G068200 Sobic004G073500--Sobic008G068200 Sobic010G023700 Sobic010G023700 Sobic004G073500--Sobic010G023700 Sobic006G147300 Sobic006G147300 Sobic004G073500--Sobic006G147300 Sobic003G431900 Sobic003G431900 Sobic004G073500--Sobic003G431900 Sobic003G266500--Sobic001G439200 Sobic002G324500 Sobic002G324500 Sobic003G266500--Sobic002G324500 Sobic003G266500--Sobic004G073500 Sobic003G256700 Sobic003G256700 Sobic003G266500--Sobic003G256700 Sobic006G244000 Sobic006G244000 Sobic003G266500--Sobic006G244000 Sobic003G234200 Sobic003G234200 Sobic003G266500--Sobic003G234200 Sobic004G125700 Sobic004G125700 Sobic003G266500--Sobic004G125700 Sobic004G317500 Sobic004G317500 Sobic003G266500--Sobic004G317500 Sobic009G104800 Sobic009G104800 Sobic003G266500--Sobic009G104800 Sobic002G211000 Sobic002G211000 Sobic004G097000--Sobic002G211000 Sobic001G317400 Sobic001G317400 Sobic004G097000--Sobic001G317400 Sobic007G034300 Sobic007G034300 Sobic004G097000--Sobic007G034300 Sobic008G026800 Sobic008G026800 Sobic004G097000--Sobic008G026800 Sobic008G053200 Sobic008G053200 Sobic004G097000--Sobic008G053200 Sobic002G036000 Sobic002G036000 Sobic004G097000--Sobic002G036000 Sobic005G165500 Sobic005G165500 Sobic004G097000--Sobic005G165500 Sobic001G242600 Sobic001G242600 Sobic004G097000--Sobic001G242600 Sobic002G403600 Sobic002G403600 Sobic004G097000--Sobic002G403600 Sobic001G439200--Sobic003G266500 Sobic007G189700 Sobic007G189700 Sobic001G439200--Sobic007G189700 Sobic001G439200--Sobic003G256700 Sobic001G439200--Sobic003G431900 Sobic001G439200--Sobic004G073500 Sobic003G199800 Sobic003G199800 Sobic001G439200--Sobic003G199800 Sobic001G011700 Sobic001G011700 Sobic001G439200--Sobic001G011700 Sobic001G406000 Sobic001G406000 Sobic001G439200--Sobic001G406000 Sobic001G439200--Sobic009G104800 Sobic009G196800 Sobic009G196800 Sobic010G019700--Sobic009G196800 Sobic004G023200 Sobic004G023200 Sobic010G019700--Sobic004G023200 Sobic004G026300 Sobic004G026300 Sobic010G019700--Sobic004G026300 Sobic003G069100 Sobic003G069100 Sobic010G019700--Sobic003G069100 Sobic002G098800 Sobic002G098800 Sobic010G019700--Sobic002G098800 Sobic007G171600 Sobic007G171600 Sobic010G019700--Sobic007G171600 Sobic010G019700--Sobic003G199800 Sobic001G069000 Sobic001G069000 Sobic010G019700--Sobic001G069000 Sobic002G180400 Sobic002G180400 Sobic010G019700--Sobic002G180400 Sobic010G241300 Sobic010G241300 Sobic008G186400--Sobic010G241300 Sobic003G397200 Sobic003G397200 Sobic008G186400--Sobic003G397200 Sobic010G267700 Sobic010G267700 Sobic008G186400--Sobic010G267700 Sobic005G111500 Sobic005G111500 Sobic008G186400--Sobic005G111500 Sobic001G006400 Sobic001G006400 Sobic008G186400--Sobic001G006400 Sobic002G102200 Sobic002G102200 Sobic008G186400--Sobic002G102200 Sobic001G168800 Sobic001G168800 Sobic008G186400--Sobic001G168800 Sobic007G059500 Sobic007G059500 Sobic008G186400--Sobic007G059500 Sobic004G227200 Sobic004G227200 Sobic008G186400--Sobic004G227200 Sobic001G078400 Sobic001G078400 Sobic008G068200--Sobic001G078400 Sobic001G463200 Sobic001G463200 Sobic008G068200--Sobic001G463200 Sobic005G110502 Sobic005G110502 Sobic008G068200--Sobic005G110502 Sobic006G069300 Sobic006G069300 Sobic008G068200--Sobic006G069300 Sobic008G066100 Sobic008G066100 Sobic008G068200--Sobic008G066100 Sobic006G051300 Sobic006G051300 Sobic008G068200--Sobic006G051300 Sobic004G026700 Sobic004G026700 Sobic008G068200--Sobic004G026700 Sobic008G068200--Sobic008G053200 Sobic004G035601 Sobic004G035601 Sobic008G068200--Sobic004G035601 Sobic002G051100 Sobic002G051100 Sobic010G023700--Sobic002G051100 Sobic009G063100 Sobic009G063100 Sobic010G023700--Sobic009G063100 Sobic001G129000 Sobic001G129000 Sobic010G023700--Sobic001G129000 Sobic004G272100 Sobic004G272100 Sobic010G023700--Sobic004G272100 Sobic010G023700--Sobic004G125700 Sobic001G102800 Sobic001G102800 Sobic010G023700--Sobic001G102800 Sobic007G140800 Sobic007G140800 Sobic010G023700--Sobic007G140800 Sobic002G277100 Sobic002G277100 Sobic010G023700--Sobic002G277100 Sobic001G020100 Sobic001G020100 Sobic010G023700--Sobic001G020100 Sobic007G207800 Sobic007G207800 Sobic006G147300--Sobic007G207800 Sobic006G147300--Sobic008G066100 Sobic003G359100 Sobic003G359100 Sobic006G147300--Sobic003G359100 Sobic002G030500 Sobic002G030500 Sobic006G147300--Sobic002G030500 Sobic004G035500 Sobic004G035500 Sobic006G147300--Sobic004G035500 Sobic006G147300--Sobic002G098800 Sobic006G147300--Sobic003G199800 Sobic004G272600 Sobic004G272600 Sobic006G147300--Sobic004G272600 Sobic003G435800 Sobic003G435800 Sobic006G147300--Sobic003G435800 Sobic003G431900--Sobic008G053200 Sobic003G431900--Sobic003G234200 Sobic004G305800 Sobic004G305800 Sobic003G431900--Sobic004G305800 Sobic003G431900--Sobic003G256700 Sobic001G519800 Sobic001G519800 Sobic003G431900--Sobic001G519800 Sobic003G431900--Sobic005G165500 Sobic003G431900--Sobic002G324500 Sobic004G308700 Sobic004G308700 Sobic003G431900--Sobic004G308700 Sobic003G431900--Sobic004G272100
Octagon: transcription factors


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