Gene annotation
Transcriptome id Sobic.008G068200.1
Synonym Sb08g005660, AAP6
Functional annotation amino acid transporter, putative, expressed
UniProt C5YTF0
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF241
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G49630 : amino acid permease 6
RAP-DB (Rice) LOC_Os12g09300.1 : amino acid transporter, putative, expressed
MaizeGDB (Corn) Zm00025a040594 , Zm00025a051049
Brachypodium KQJ85085 , KQK01542 , PNT69503 , KQJ91917
Barley HORVU3Hr1G081610.2 , HORVU3Hr1G081610.6 , HORVU3Hr1G081610.5 , HORVU3Hr1G081610.4 , HORVU5Hr1G029060.1 , HORVU5Hr1G029060.2 , HORVU5Hr1G029060.3 , HORVU5Hr1G029060.4 , HORVU5Hr1G029060.5 , HORVU5Hr1G029060.6 , HORVU5Hr1G029060.7 , HORVU2Hr1G061190.7 , HORVU2Hr1G061190.5 , HORVU2Hr1G061190.4 , HORVU2Hr1G061190.3 , HORVU2Hr1G061190.2 , HORVU2Hr1G061190.1
Wheat TraesCS5B02G120800 , TraesCS2A02G268200 , TraesCS2B02G266600 , TraesCS3A02G388100 , TraesCS5A02G115800 , TraesCSU02G134900 , TraesCS3D02G381400 , TraesCS3B02G420600
Populus -


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cDNA sequences
Sobic.008G068200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G078400 OsSigP2 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K03100: signal peptidase I
2 Sobic.001G463200 BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
3 Sobic.005G110502 - -
4 Sobic.006G069300 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
5 Sobic.008G066100 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed -
6 Sobic.006G051300 expressed protein -
7 Sobic.004G026700 down-regulated TF in developmental senescence(PubMedID : 27586543)@transcription factor, putative, expressed K09060: plant G-box-binding factor
8 Sobic.008G053200 fructose-bisphosphate aldolase 2(PubMedID : 26465154)@fructose-bisphosphate aldolase 2("PubMedID : 26759170,PubMedID : 24597475")@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
9 Sobic.004G035601 - -
10 Sobic.010G164200 osFTL12 FT-Like12 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
11 Sobic.006G160400 peroxisomal biogenesis factor 11, putative, expressed -
12 Sobic.003G431900 -(PubMedID : 26976818)@expressed protein K07562: nonsense-mediated mRNA decay protein 3
13 Sobic.001G425400 high cyclic electron flow 1(PubMedID : 26465154)@"D-fructose-1,6-bisphosphate 1-phosphohydrolase (Os)"(PubMedID : 27208977)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
14 Sobic.008G104601 - -
15 Sobic.002G036000 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
16 Sobic.003G395900 transmembrane amino acid transporter protein, putative, expressed -
17 Sobic.001G344600 late embryogenesis abundant protein, putative, expressed -
18 Sobic.004G122200 expressed protein -
19 Sobic.004G073500 "domain confirmed by Pfam database, expressed in leaf, flower and root, expression induced by BR treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
20 Sobic.009G140800 DUF647 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G068200 Sobic008G068200 Sobic001G078400 Sobic001G078400 Sobic008G068200--Sobic001G078400 Sobic001G463200 Sobic001G463200 Sobic008G068200--Sobic001G463200 Sobic005G110502 Sobic005G110502 Sobic008G068200--Sobic005G110502 Sobic006G069300 Sobic006G069300 Sobic008G068200--Sobic006G069300 Sobic008G066100 Sobic008G066100 Sobic008G068200--Sobic008G066100 Sobic006G051300 Sobic006G051300 Sobic008G068200--Sobic006G051300 Sobic004G026700 Sobic004G026700 Sobic008G068200--Sobic004G026700 Sobic008G053200 Sobic008G053200 Sobic008G068200--Sobic008G053200 Sobic004G035601 Sobic004G035601 Sobic008G068200--Sobic004G035601 Sobic002G030500 Sobic002G030500 Sobic001G078400--Sobic002G030500 Sobic001G078400--Sobic004G026700 Sobic004G033700 Sobic004G033700 Sobic001G078400--Sobic004G033700 Sobic001G078400--Sobic008G066100 Sobic007G029700 Sobic007G029700 Sobic001G078400--Sobic007G029700 Sobic002G000700 Sobic002G000700 Sobic001G078400--Sobic002G000700 Sobic006G147300 Sobic006G147300 Sobic001G078400--Sobic006G147300 Sobic001G338700 Sobic001G338700 Sobic001G078400--Sobic001G338700 Sobic008G015100 Sobic008G015100 Sobic001G078400--Sobic008G015100 Sobic004G272600 Sobic004G272600 Sobic001G463200--Sobic004G272600 Sobic008G026800 Sobic008G026800 Sobic001G463200--Sobic008G026800 Sobic001G463200--Sobic004G035601 Sobic002G064000 Sobic002G064000 Sobic001G463200--Sobic002G064000 Sobic001G463200--Sobic006G147300 Sobic001G463200--Sobic006G051300 Sobic005G111200 Sobic005G111200 Sobic001G463200--Sobic005G111200 Sobic001G463200--Sobic008G015100 Sobic001G463200--Sobic008G053200 Sobic001G329400 Sobic001G329400 Sobic005G110502--Sobic001G329400 Sobic009G140800 Sobic009G140800 Sobic005G110502--Sobic009G140800 Sobic004G283100 Sobic004G283100 Sobic005G110502--Sobic004G283100 Sobic006G160400 Sobic006G160400 Sobic005G110502--Sobic006G160400 Sobic004G125700 Sobic004G125700 Sobic005G110502--Sobic004G125700 Sobic004G238600 Sobic004G238600 Sobic005G110502--Sobic004G238600 Sobic002G098800 Sobic002G098800 Sobic005G110502--Sobic002G098800 Sobic008G115900 Sobic008G115900 Sobic005G110502--Sobic008G115900 Sobic008G104601 Sobic008G104601 Sobic005G110502--Sobic008G104601 Sobic003G431900 Sobic003G431900 Sobic006G069300--Sobic003G431900 Sobic006G069300--Sobic008G053200 Sobic006G069300--Sobic008G104601 Sobic004G305800 Sobic004G305800 Sobic006G069300--Sobic004G305800 Sobic003G199800 Sobic003G199800 Sobic006G069300--Sobic003G199800 Sobic003G256700 Sobic003G256700 Sobic006G069300--Sobic003G256700 Sobic006G069300--Sobic004G035601 Sobic001G520800 Sobic001G520800 Sobic006G069300--Sobic001G520800 Sobic009G104800 Sobic009G104800 Sobic006G069300--Sobic009G104800 Sobic001G425400 Sobic001G425400 Sobic008G066100--Sobic001G425400 Sobic003G359100 Sobic003G359100 Sobic008G066100--Sobic003G359100 Sobic004G308700 Sobic004G308700 Sobic008G066100--Sobic004G308700 Sobic007G207800 Sobic007G207800 Sobic008G066100--Sobic007G207800 Sobic008G134800 Sobic008G134800 Sobic008G066100--Sobic008G134800 Sobic004G272100 Sobic004G272100 Sobic008G066100--Sobic004G272100 Sobic004G035500 Sobic004G035500 Sobic008G066100--Sobic004G035500 Sobic007G223500 Sobic007G223500 Sobic008G066100--Sobic007G223500 Sobic008G066100--Sobic002G030500 Sobic006G051300--Sobic004G035601 Sobic006G051300--Sobic008G104601 Sobic001G344600 Sobic001G344600 Sobic006G051300--Sobic001G344600 Sobic010G183100 Sobic010G183100 Sobic006G051300--Sobic010G183100 Sobic006G051300--Sobic001G463200 Sobic006G051300--Sobic003G199800 Sobic006G051300--Sobic001G520800 Sobic006G051300--Sobic004G026700 Sobic003G069000 Sobic003G069000 Sobic006G051300--Sobic003G069000 Sobic002G000500 Sobic002G000500 Sobic004G026700--Sobic002G000500 Sobic001G274600 Sobic001G274600 Sobic004G026700--Sobic001G274600 Sobic001G361700 Sobic001G361700 Sobic004G026700--Sobic001G361700 Sobic002G040100 Sobic002G040100 Sobic004G026700--Sobic002G040100 Sobic006G011100 Sobic006G011100 Sobic004G026700--Sobic006G011100 Sobic004G026700--Sobic003G199800 Sobic004G026700--Sobic004G035601 Sobic003G209800 Sobic003G209800 Sobic004G026700--Sobic003G209800 Sobic004G026700--Sobic001G338700 Sobic008G053200--Sobic003G431900 Sobic001G519800 Sobic001G519800 Sobic008G053200--Sobic001G519800 Sobic003G234200 Sobic003G234200 Sobic008G053200--Sobic003G234200 Sobic002G036000 Sobic002G036000 Sobic008G053200--Sobic002G036000 Sobic008G053200--Sobic004G238600 Sobic008G053200--Sobic004G283100 Sobic008G053200--Sobic004G272100 Sobic008G053200--Sobic004G308700 Sobic005G089600 Sobic005G089600 Sobic008G053200--Sobic005G089600 Sobic004G035601--Sobic006G051300 Sobic004G035601--Sobic003G199800 Sobic008G016250 Sobic008G016250 Sobic004G035601--Sobic008G016250 Sobic004G035700 Sobic004G035700 Sobic004G035601--Sobic004G035700 Sobic004G035601--Sobic004G026700 Sobic004G035601--Sobic002G000500 Sobic004G035601--Sobic010G183100 Sobic004G035601--Sobic002G040100 Sobic008G038300 Sobic008G038300 Sobic004G035601--Sobic008G038300
Octagon: transcription factors


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