Gene annotation
Transcriptome id Sobic.006G069300.1
Synonym CAH1, Sb06g015600, ATACA1, ACA1
Functional annotation bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed
UniProt C5YFV4
Pfam PF00194
Panther DB PTHR18952 PTHR18952:SF129
NCBI CDD KOG0382; Carbonic anhydrase
KEGG Orthology K01674; carbonic anhydrase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52720 : alpha carbonic anhydrase 1
RAP-DB (Rice) LOC_Os04g33660.2 : bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a011514
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G069300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G431900 -(PubMedID : 26976818)@expressed protein K07562: nonsense-mediated mRNA decay protein 3
2 Sobic.008G053200 fructose-bisphosphate aldolase 2(PubMedID : 26465154)@fructose-bisphosphate aldolase 2("PubMedID : 26759170,PubMedID : 24597475")@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
3 Sobic.008G104601 - -
4 Sobic.004G305800 expressed protein -
5 Sobic.003G199800 expressed protein -
6 Sobic.003G256700 expressed protein -
7 Sobic.004G035601 - -
8 Sobic.001G520800 expressed protein -
9 Sobic.009G104800 AMP deaminase, putative, expressed K01490: AMP deaminase
10 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
11 Sobic.006G244000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
12 Sobic.004G035500 -(PubMedID : 26976818)@Involved in photorespiratory pathway(PubMedID : 12887583)@dicarboxylate transporter 3(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
13 Sobic.005G056400 Fructose-bisphosphate aldolase(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Fructose-bisphosphate aldolase, putative (Os)"(PubMedID : 27208977)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
14 Sobic.004G238600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@starch synthase, putative, expressed K00703: starch synthase
15 Sobic.007G034300 expressed protein -
16 Sobic.004G125700 isochorismatase family protein, putative, expressed -
17 Sobic.003G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
18 Sobic.010G095000 kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
19 Sobic.006G160400 peroxisomal biogenesis factor 11, putative, expressed -
20 Sobic.004G283100 -(PubMedID : 26465154)@expressed protein -


Gene co-expression network
sample Sobic006G069300 Sobic006G069300 Sobic003G431900 Sobic003G431900 Sobic006G069300--Sobic003G431900 Sobic008G053200 Sobic008G053200 Sobic006G069300--Sobic008G053200 Sobic008G104601 Sobic008G104601 Sobic006G069300--Sobic008G104601 Sobic004G305800 Sobic004G305800 Sobic006G069300--Sobic004G305800 Sobic003G199800 Sobic003G199800 Sobic006G069300--Sobic003G199800 Sobic003G256700 Sobic003G256700 Sobic006G069300--Sobic003G256700 Sobic004G035601 Sobic004G035601 Sobic006G069300--Sobic004G035601 Sobic001G520800 Sobic001G520800 Sobic006G069300--Sobic001G520800 Sobic009G104800 Sobic009G104800 Sobic006G069300--Sobic009G104800 Sobic003G431900--Sobic008G053200 Sobic003G234200 Sobic003G234200 Sobic003G431900--Sobic003G234200 Sobic003G431900--Sobic004G305800 Sobic003G431900--Sobic003G256700 Sobic001G519800 Sobic001G519800 Sobic003G431900--Sobic001G519800 Sobic005G165500 Sobic005G165500 Sobic003G431900--Sobic005G165500 Sobic002G324500 Sobic002G324500 Sobic003G431900--Sobic002G324500 Sobic004G308700 Sobic004G308700 Sobic003G431900--Sobic004G308700 Sobic004G272100 Sobic004G272100 Sobic003G431900--Sobic004G272100 Sobic008G053200--Sobic003G431900 Sobic008G053200--Sobic001G519800 Sobic008G053200--Sobic003G234200 Sobic002G036000 Sobic002G036000 Sobic008G053200--Sobic002G036000 Sobic004G238600 Sobic004G238600 Sobic008G053200--Sobic004G238600 Sobic004G283100 Sobic004G283100 Sobic008G053200--Sobic004G283100 Sobic008G053200--Sobic004G272100 Sobic008G053200--Sobic004G308700 Sobic005G089600 Sobic005G089600 Sobic008G053200--Sobic005G089600 Sobic006G244000 Sobic006G244000 Sobic008G104601--Sobic006G244000 Sobic007G034300 Sobic007G034300 Sobic008G104601--Sobic007G034300 Sobic008G104601--Sobic001G520800 Sobic001G329400 Sobic001G329400 Sobic008G104601--Sobic001G329400 Sobic008G104601--Sobic003G431900 Sobic008G104601--Sobic003G256700 Sobic004G125700 Sobic004G125700 Sobic008G104601--Sobic004G125700 Sobic006G051300 Sobic006G051300 Sobic008G104601--Sobic006G051300 Sobic008G104601--Sobic009G104800 Sobic002G370600 Sobic002G370600 Sobic004G305800--Sobic002G370600 Sobic001G491000 Sobic001G491000 Sobic004G305800--Sobic001G491000 Sobic005G056400 Sobic005G056400 Sobic004G305800--Sobic005G056400 Sobic009G129300 Sobic009G129300 Sobic004G305800--Sobic009G129300 Sobic004G268000 Sobic004G268000 Sobic004G305800--Sobic004G268000 Sobic010G201700 Sobic010G201700 Sobic004G305800--Sobic010G201700 Sobic007G161500 Sobic007G161500 Sobic004G305800--Sobic007G161500 Sobic004G305800--Sobic003G431900 Sobic006G238200 Sobic006G238200 Sobic004G305800--Sobic006G238200 Sobic002G040100 Sobic002G040100 Sobic003G199800--Sobic002G040100 Sobic010G276400 Sobic010G276400 Sobic003G199800--Sobic010G276400 Sobic002G000500 Sobic002G000500 Sobic003G199800--Sobic002G000500 Sobic010G183100 Sobic010G183100 Sobic003G199800--Sobic010G183100 Sobic004G035500 Sobic004G035500 Sobic003G199800--Sobic004G035500 Sobic008G038300 Sobic008G038300 Sobic003G199800--Sobic008G038300 Sobic010G109500 Sobic010G109500 Sobic003G199800--Sobic010G109500 Sobic007G189700 Sobic007G189700 Sobic003G199800--Sobic007G189700 Sobic009G191300 Sobic009G191300 Sobic003G199800--Sobic009G191300 Sobic003G256700--Sobic003G431900 Sobic003G256700--Sobic006G244000 Sobic003G256700--Sobic002G324500 Sobic003G256700--Sobic004G125700 Sobic003G256700--Sobic009G104800 Sobic003G256700--Sobic008G053200 Sobic003G256700--Sobic002G036000 Sobic003G256700--Sobic001G329400 Sobic003G256700--Sobic003G234200 Sobic004G035601--Sobic006G051300 Sobic004G035601--Sobic003G199800 Sobic008G016250 Sobic008G016250 Sobic004G035601--Sobic008G016250 Sobic004G035700 Sobic004G035700 Sobic004G035601--Sobic004G035700 Sobic004G026700 Sobic004G026700 Sobic004G035601--Sobic004G026700 Sobic004G035601--Sobic002G000500 Sobic004G035601--Sobic010G183100 Sobic004G035601--Sobic002G040100 Sobic004G035601--Sobic008G038300 Sobic001G520800--Sobic007G034300 Sobic005G039600 Sobic005G039600 Sobic001G520800--Sobic005G039600 Sobic001G520800--Sobic003G199800 Sobic001G520800--Sobic008G104601 Sobic003G231800 Sobic003G231800 Sobic001G520800--Sobic003G231800 Sobic002G233300 Sobic002G233300 Sobic001G520800--Sobic002G233300 Sobic009G244300 Sobic009G244300 Sobic001G520800--Sobic009G244300 Sobic001G520800--Sobic007G189700 Sobic001G520800--Sobic003G431900 Sobic009G104800--Sobic004G125700 Sobic003G024300 Sobic003G024300 Sobic009G104800--Sobic003G024300 Sobic009G104800--Sobic001G329400 Sobic006G077400 Sobic006G077400 Sobic009G104800--Sobic006G077400 Sobic009G104800--Sobic006G244000 Sobic007G140800 Sobic007G140800 Sobic009G104800--Sobic007G140800 Sobic009G104800--Sobic003G256700 Sobic009G104800--Sobic007G161500 Sobic010G095000 Sobic010G095000 Sobic009G104800--Sobic010G095000
Octagon: transcription factors


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