Gene annotation
Transcriptome id Sobic.001G011700.1
Synonym Sb01g001140, AK-LYS1, AK, AK1
Functional annotation aspartokinase, chloroplast precursor, putative, expressed
UniProt C5WSV9
Pfam PF00696
Panther DB PTHR21499 PTHR21499:SF34
NCBI CDD -
KEGG Orthology K00928; aspartate kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13280 : aspartate kinase 1
RAP-DB (Rice) LOC_Os03g63330.1 : aspartokinase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a013305 , Zm00025a009032 , Zm00025a016328
Brachypodium KQK12132
Barley HORVU5Hr1G121250.14 , HORVU5Hr1G121250.15 , HORVU5Hr1G121250.12 , HORVU5Hr1G121250.13 , HORVU5Hr1G121250.10 , HORVU5Hr1G121250.11 , HORVU5Hr1G121250.8 , HORVU5Hr1G121250.9 , HORVU5Hr1G121250.4 , HORVU5Hr1G121250.5 , HORVU5Hr1G121250.6 , HORVU5Hr1G121250.7 , HORVU5Hr1G121250.1 , HORVU5Hr1G121250.2 , HORVU5Hr1G121250.3 , HORVU3Hr1G096500.9 , HORVU3Hr1G096500.8 , HORVU3Hr1G096500.7 , HORVU3Hr1G096500.6 , HORVU3Hr1G096500.5 , HORVU3Hr1G096500.4 , HORVU3Hr1G096500.3 , HORVU3Hr1G096500.2 , HORVU3Hr1G096500.1 , HORVU3Hr1G096500.13 , HORVU3Hr1G096500.16 , HORVU3Hr1G096500.15 , HORVU3Hr1G096500.14 , HORVU3Hr1G096500.12 , HORVU3Hr1G096500.11 , HORVU3Hr1G096500.10
Wheat TraesCS5D02G487000 , TraesCS5D02G487000 , TraesCS3D02G434800 , TraesCS3A02G442100 , TraesCS4A02G337800 , TraesCS5B02G547400 , TraesCS5D02G534600 , TraesCS5D02G534600 , TraesCS5D02G534600 , TraesCS3A02G442100 , TraesCS3A02G442100 , TraesCS7B02G461700 , TraesCS3B02G475900 , TraesCS3B02G475900
Populus -


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cDNA sequences
Sobic.001G011700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G021300 Unnamed(PubMedID : 24676859)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
2 Sobic.004G175500 OsAPx8 - Thylakoid-bound Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
3 Sobic.004G343300 -(PubMedID : 26465154)@unknown(PubMedID : 29017446)@expressed protein -
4 Sobic.009G125400 FZL, putative, expressed -
5 Sobic.007G004800 Ferredoxin-1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
6 Sobic.006G103400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.003G132100 magnesium-protoporphyrin IX monomethyl ester cyclase,chloroplast precursor, putative, expressed K04035: E1.14.13.81, acsF, magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
8 Sobic.002G152700 rhodanese-like, putative, expressed -
9 Sobic.003G197400 Protein lycopene epsilon cyclase (Os)(PubMedID : 27208977)@-(PubMedID : 29017446)@lycopene epsilon cyclase, chloroplast precursor, putative, expressed K06444: lcyE, lycopene epsilon-cyclase
10 Sobic.008G019100 - -
11 Sobic.001G041800 -(PubMedID : 29017446)@magnesium-chelatase subunit chlD, chloroplast precursor, putative, expressed K03404: chlD, magnesium chelatase subunit D
12 Sobic.003G387800 unknown(PubMedID : 29017446)@rhodanese-like domain containing protein, putative, expressed -
13 Sobic.002G033800 expressed protein -
14 Sobic.001G098800 ATP synthase F1, delta subunit family protein, putative, expressed -
15 Sobic.004G023200 Polyketide cyclase/dehydrase and lipid transport superfamily protein(PubMedID : 26465154)@membrane related protein CP5, putative, expressed -
16 Sobic.004G249800 expressed protein -
17 Sobic.006G272900 peroxidase activity(PubMedID : 29491869)@glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
18 Sobic.001G102800 expressed protein -
19 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
20 Sobic.001G010100 ankyrin repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic001G011700 Sobic001G011700 Sobic008G021300 Sobic008G021300 Sobic001G011700--Sobic008G021300 Sobic004G175500 Sobic004G175500 Sobic001G011700--Sobic004G175500 Sobic004G343300 Sobic004G343300 Sobic001G011700--Sobic004G343300 Sobic009G125400 Sobic009G125400 Sobic001G011700--Sobic009G125400 Sobic007G004800 Sobic007G004800 Sobic001G011700--Sobic007G004800 Sobic006G103400 Sobic006G103400 Sobic001G011700--Sobic006G103400 Sobic003G132100 Sobic003G132100 Sobic001G011700--Sobic003G132100 Sobic002G152700 Sobic002G152700 Sobic001G011700--Sobic002G152700 Sobic003G197400 Sobic003G197400 Sobic001G011700--Sobic003G197400 Sobic003G303700 Sobic003G303700 Sobic008G021300--Sobic003G303700 Sobic008G021300--Sobic002G152700 Sobic008G021300--Sobic007G004800 Sobic006G272900 Sobic006G272900 Sobic008G021300--Sobic006G272900 Sobic004G035500 Sobic004G035500 Sobic008G021300--Sobic004G035500 Sobic010G201700 Sobic010G201700 Sobic008G021300--Sobic010G201700 Sobic001G519800 Sobic001G519800 Sobic008G021300--Sobic001G519800 Sobic001G102800 Sobic001G102800 Sobic008G021300--Sobic001G102800 Sobic009G043000 Sobic009G043000 Sobic008G021300--Sobic009G043000 Sobic003G387800 Sobic003G387800 Sobic004G175500--Sobic003G387800 Sobic004G175500--Sobic004G343300 Sobic004G175500--Sobic007G004800 Sobic002G198600 Sobic002G198600 Sobic004G175500--Sobic002G198600 Sobic004G249800 Sobic004G249800 Sobic004G175500--Sobic004G249800 Sobic007G071500 Sobic007G071500 Sobic004G175500--Sobic007G071500 Sobic001G029100 Sobic001G029100 Sobic004G175500--Sobic001G029100 Sobic004G175500--Sobic006G103400 Sobic009G030900 Sobic009G030900 Sobic004G175500--Sobic009G030900 Sobic004G343300--Sobic004G249800 Sobic004G343300--Sobic003G132100 Sobic006G105900 Sobic006G105900 Sobic004G343300--Sobic006G105900 Sobic001G448400 Sobic001G448400 Sobic004G343300--Sobic001G448400 Sobic004G343300--Sobic007G071500 Sobic010G241000 Sobic010G241000 Sobic004G343300--Sobic010G241000 Sobic006G234100 Sobic006G234100 Sobic004G343300--Sobic006G234100 Sobic004G343300--Sobic004G175500 Sobic002G033800 Sobic002G033800 Sobic004G343300--Sobic002G033800 Sobic001G069000 Sobic001G069000 Sobic009G125400--Sobic001G069000 Sobic004G308700 Sobic004G308700 Sobic009G125400--Sobic004G308700 Sobic004G272100 Sobic004G272100 Sobic009G125400--Sobic004G272100 Sobic009G125400--Sobic007G004800 Sobic009G125400--Sobic008G021300 Sobic007G009200 Sobic007G009200 Sobic009G125400--Sobic007G009200 Sobic009G125400--Sobic001G102800 Sobic009G125400--Sobic010G201700 Sobic009G125400--Sobic006G272900 Sobic007G004800--Sobic003G387800 Sobic007G004800--Sobic001G519800 Sobic007G004800--Sobic008G021300 Sobic007G004800--Sobic004G175500 Sobic003G002300 Sobic003G002300 Sobic007G004800--Sobic003G002300 Sobic002G051100 Sobic002G051100 Sobic007G004800--Sobic002G051100 Sobic007G004800--Sobic004G272100 Sobic007G052400 Sobic007G052400 Sobic007G004800--Sobic007G052400 Sobic006G093900 Sobic006G093900 Sobic007G004800--Sobic006G093900 Sobic006G103400--Sobic004G343300 Sobic004G023200 Sobic004G023200 Sobic006G103400--Sobic004G023200 Sobic006G103400--Sobic004G175500 Sobic006G103400--Sobic003G197400 Sobic006G103400--Sobic002G033800 Sobic006G103400--Sobic004G249800 Sobic001G041800 Sobic001G041800 Sobic006G103400--Sobic001G041800 Sobic006G103400--Sobic010G241000 Sobic004G235200 Sobic004G235200 Sobic006G103400--Sobic004G235200 Sobic003G132100--Sobic004G343300 Sobic008G051000 Sobic008G051000 Sobic003G132100--Sobic008G051000 Sobic003G132100--Sobic003G197400 Sobic006G264201 Sobic006G264201 Sobic003G132100--Sobic006G264201 Sobic004G238500 Sobic004G238500 Sobic003G132100--Sobic004G238500 Sobic003G433900 Sobic003G433900 Sobic003G132100--Sobic003G433900 Sobic003G132100--Sobic004G249800 Sobic003G132100--Sobic001G448400 Sobic009G091800 Sobic009G091800 Sobic003G132100--Sobic009G091800 Sobic002G152700--Sobic008G021300 Sobic001G527000 Sobic001G527000 Sobic002G152700--Sobic001G527000 Sobic002G152700--Sobic002G033800 Sobic002G152700--Sobic003G303700 Sobic010G005500 Sobic010G005500 Sobic002G152700--Sobic010G005500 Sobic002G152700--Sobic006G272900 Sobic002G152700--Sobic004G343300 Sobic002G152700--Sobic009G030900 Sobic002G152700--Sobic003G132100 Sobic003G197400--Sobic001G041800 Sobic003G197400--Sobic003G132100 Sobic003G197400--Sobic004G343300 Sobic006G222700 Sobic006G222700 Sobic003G197400--Sobic006G222700 Sobic003G197400--Sobic006G103400 Sobic007G029300 Sobic007G029300 Sobic003G197400--Sobic007G029300 Sobic003G197400--Sobic004G175500 Sobic003G197400--Sobic001G448400 Sobic003G197400--Sobic002G033800
Octagon: transcription factors


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