Gene annotation
Transcriptome id Sobic.001G302200.2,Sobic.001G302200.3
Synonym Sb01g029400
Functional annotation glycosyl transferase 8 domain containing protein, putative, expressed
UniProt C5WSG9
Pfam -
Panther DB PTHR11183 PTHR11183:SF60
NCBI CDD KOG1950; Glycosyl transferase, family 8 - glycogenin
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G16600 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os10g40640.1 : glycosyl transferase 8 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a003345 , Zm00025a051989
Brachypodium KQJ97758
Barley HORVU1Hr1G054100.6 , HORVU1Hr1G054100.7 , HORVU1Hr1G054100.5 , HORVU1Hr1G054100.4 , HORVU1Hr1G054100.2 , HORVU1Hr1G054100.1
Wheat TraesCS1B02G225300 , TraesCS1A02G211500
Populus -


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cDNA sequences
Sobic.001G302200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G136600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
2 Sobic.003G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
3 Sobic.002G339600 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
4 Sobic.003G349200 cation efflux family protein, putative, expressed -
5 Sobic.007G033800 basic helix-loop-helix DND-binding domain containing protein, expressed -
6 Sobic.004G317500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
7 Sobic.003G277600 DNAse I-like superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
8 Sobic.003G266500 Phosphoethanolamine N-methyltransferase XPL1 (At)(PubMedID : 27208977)@CPuORF25 - conserved peptide uORF-containing transcript, expressed K05929: E2.1.1.103, phosphoethanolamine N-methyltransferase
9 Sobic.010G023700 Transketolase(PubMedID : 26186930)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
10 Sobic.004G028200 UP-9A, putative, expressed -
11 Sobic.001G185800 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.001G339500 expressed protein -
13 Sobic.010G019300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, NUDIX family, domain containing protein, expressed K18447: ADP-sugar diphosphatase
14 Sobic.003G330300 OsCML1 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin
15 Sobic.003G334000 expressed protein -
16 Sobic.003G229600 siroheme synthase, putative, expressed -
17 Sobic.001G265700 receptor-like protein kinase precursor, putative, expressed -
18 Sobic.001G193200 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
19 Sobic.001G129000 DnaK family protein, putative, expressed -
20 Sobic.001G439200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -


Gene co-expression network
sample Sobic001G302200 Sobic001G302200 Sobic004G136600 Sobic004G136600 Sobic001G302200--Sobic004G136600 Sobic003G243600 Sobic003G243600 Sobic001G302200--Sobic003G243600 Sobic002G339600 Sobic002G339600 Sobic001G302200--Sobic002G339600 Sobic003G349200 Sobic003G349200 Sobic001G302200--Sobic003G349200 Sobic007G033800 Sobic007G033800 Sobic001G302200--Sobic007G033800 Sobic004G317500 Sobic004G317500 Sobic001G302200--Sobic004G317500 Sobic003G277600 Sobic003G277600 Sobic001G302200--Sobic003G277600 Sobic003G266500 Sobic003G266500 Sobic001G302200--Sobic003G266500 Sobic010G023700 Sobic010G023700 Sobic001G302200--Sobic010G023700 Sobic004G236300 Sobic004G236300 Sobic004G136600--Sobic004G236300 Sobic004G136600--Sobic003G243600 Sobic004G136600--Sobic001G302200 Sobic003G130800 Sobic003G130800 Sobic004G136600--Sobic003G130800 Sobic006G180200 Sobic006G180200 Sobic004G136600--Sobic006G180200 Sobic002G245400 Sobic002G245400 Sobic004G136600--Sobic002G245400 Sobic003G337000 Sobic003G337000 Sobic004G136600--Sobic003G337000 Sobic002G066400 Sobic002G066400 Sobic004G136600--Sobic002G066400 Sobic002G355300 Sobic002G355300 Sobic004G136600--Sobic002G355300 Sobic001G070000 Sobic001G070000 Sobic003G243600--Sobic001G070000 Sobic003G243600--Sobic007G033800 Sobic003G243600--Sobic004G136600 Sobic001G339500 Sobic001G339500 Sobic003G243600--Sobic001G339500 Sobic003G214500 Sobic003G214500 Sobic003G243600--Sobic003G214500 Sobic010G027000 Sobic010G027000 Sobic003G243600--Sobic010G027000 Sobic006G254100 Sobic006G254100 Sobic003G243600--Sobic006G254100 Sobic003G243600--Sobic001G302200 Sobic003G350800 Sobic003G350800 Sobic003G243600--Sobic003G350800 Sobic002G339600--Sobic001G339500 Sobic006G215600 Sobic006G215600 Sobic002G339600--Sobic006G215600 Sobic002G111200 Sobic002G111200 Sobic002G339600--Sobic002G111200 Sobic003G443500 Sobic003G443500 Sobic002G339600--Sobic003G443500 Sobic002G128900 Sobic002G128900 Sobic002G339600--Sobic002G128900 Sobic004G151500 Sobic004G151500 Sobic002G339600--Sobic004G151500 Sobic001G257700 Sobic001G257700 Sobic002G339600--Sobic001G257700 Sobic002G309900 Sobic002G309900 Sobic002G339600--Sobic002G309900 Sobic002G339600--Sobic007G033800 Sobic003G349200--Sobic001G339500 Sobic008G033200 Sobic008G033200 Sobic003G349200--Sobic008G033200 Sobic002G401900 Sobic002G401900 Sobic003G349200--Sobic002G401900 Sobic006G011300 Sobic006G011300 Sobic003G349200--Sobic006G011300 Sobic003G349200--Sobic006G215600 Sobic002G232200 Sobic002G232200 Sobic003G349200--Sobic002G232200 Sobic003G349200--Sobic002G339600 Sobic006G120500 Sobic006G120500 Sobic003G349200--Sobic006G120500 Sobic001G073900 Sobic001G073900 Sobic003G349200--Sobic001G073900 Sobic005G033200 Sobic005G033200 Sobic007G033800--Sobic005G033200 Sobic007G033800--Sobic001G339500 Sobic007G033800--Sobic010G023700 Sobic001G031100 Sobic001G031100 Sobic007G033800--Sobic001G031100 Sobic006G173600 Sobic006G173600 Sobic007G033800--Sobic006G173600 Sobic007G033800--Sobic002G339600 Sobic001G071800 Sobic001G071800 Sobic007G033800--Sobic001G071800 Sobic007G033800--Sobic002G111200 Sobic002G421900 Sobic002G421900 Sobic007G033800--Sobic002G421900 Sobic004G317500--Sobic006G120500 Sobic010G251700 Sobic010G251700 Sobic004G317500--Sobic010G251700 Sobic006G064100 Sobic006G064100 Sobic004G317500--Sobic006G064100 Sobic004G027600 Sobic004G027600 Sobic004G317500--Sobic004G027600 Sobic008G047000 Sobic008G047000 Sobic004G317500--Sobic008G047000 Sobic002G324500 Sobic002G324500 Sobic004G317500--Sobic002G324500 Sobic002G403600 Sobic002G403600 Sobic004G317500--Sobic002G403600 Sobic004G112100 Sobic004G112100 Sobic004G317500--Sobic004G112100 Sobic002G404800 Sobic002G404800 Sobic004G317500--Sobic002G404800 Sobic003G372400 Sobic003G372400 Sobic003G277600--Sobic003G372400 Sobic009G246300 Sobic009G246300 Sobic003G277600--Sobic009G246300 Sobic004G165500 Sobic004G165500 Sobic003G277600--Sobic004G165500 Sobic010G104800 Sobic010G104800 Sobic003G277600--Sobic010G104800 Sobic009G048900 Sobic009G048900 Sobic003G277600--Sobic009G048900 Sobic003G277600--Sobic004G112100 Sobic003G139500 Sobic003G139500 Sobic003G277600--Sobic003G139500 Sobic001G043000 Sobic001G043000 Sobic003G277600--Sobic001G043000 Sobic003G042900 Sobic003G042900 Sobic003G277600--Sobic003G042900 Sobic001G439200 Sobic001G439200 Sobic003G266500--Sobic001G439200 Sobic003G266500--Sobic002G324500 Sobic004G073500 Sobic004G073500 Sobic003G266500--Sobic004G073500 Sobic003G256700 Sobic003G256700 Sobic003G266500--Sobic003G256700 Sobic006G244000 Sobic006G244000 Sobic003G266500--Sobic006G244000 Sobic003G234200 Sobic003G234200 Sobic003G266500--Sobic003G234200 Sobic004G125700 Sobic004G125700 Sobic003G266500--Sobic004G125700 Sobic003G266500--Sobic004G317500 Sobic009G104800 Sobic009G104800 Sobic003G266500--Sobic009G104800 Sobic002G051100 Sobic002G051100 Sobic010G023700--Sobic002G051100 Sobic009G063100 Sobic009G063100 Sobic010G023700--Sobic009G063100 Sobic001G129000 Sobic001G129000 Sobic010G023700--Sobic001G129000 Sobic004G272100 Sobic004G272100 Sobic010G023700--Sobic004G272100 Sobic010G023700--Sobic004G125700 Sobic001G102800 Sobic001G102800 Sobic010G023700--Sobic001G102800 Sobic007G140800 Sobic007G140800 Sobic010G023700--Sobic007G140800 Sobic002G277100 Sobic002G277100 Sobic010G023700--Sobic002G277100 Sobic001G020100 Sobic001G020100 Sobic010G023700--Sobic001G020100
Octagon: transcription factors


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