Gene annotation
Transcriptome id Sobic.003G330300.1
Synonym Sb03g037630, ACAM-2, CAM5
Functional annotation OsCML1 - Calmodulin-related calcium sensor protein, expressed
UniProt C5XN41
Pfam PF13499
Panther DB PTHR23050 PTHR23050:SF181
NCBI CDD KOG0027; Calmodulin and related proteins (EF-Hand superfamily)
KEGG Orthology K02183; calmodulin
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G27030 : calmodulin 5
RAP-DB (Rice) LOC_Os01g59530.1 : OsCML1 - Calmodulin-related calcium sensor protein, expressed
MaizeGDB (Corn) Zm00025a002229 , Zm00025a027145 , Zm00025a013128
Brachypodium KQK10250 , KQK05657
Barley HORVU0Hr1G001270.2 , HORVU0Hr1G001270.3 , HORVU0Hr1G001270.1 , HORVU0Hr1G001270.4 , HORVU3Hr1G079210.4 , HORVU3Hr1G079210.7 , HORVU3Hr1G079210.9
Wheat TraesCS1D02G308100 , TraesCS1B02G319400 , TraesCS1B02G319400 , TraesCS3B02G365900 , TraesCS4D02G179800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G339500 expressed protein -
2 Sobic.003G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
3 Sobic.001G328200 interferon-related developmental regulator, putative, expressed -
4 Sobic.010G019300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, NUDIX family, domain containing protein, expressed K18447: ADP-sugar diphosphatase
5 Sobic.003G034700 phosphofructokinase 3(PubMedID : 26465154)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
6 Sobic.008G140100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
7 Sobic.001G302200 glycosyl transferase 8 domain containing protein, putative, expressed -
8 Sobic.009G190700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@jacalin-like lectin domain containing protein, expressed -
9 Sobic.010G027000 enolase, putative, expressed K01689: ENO, enolase
10 Sobic.002G339600 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
11 Sobic.003G349200 cation efflux family protein, putative, expressed -
12 Sobic.002G313800 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
13 Sobic.001G070000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
14 Sobic.004G255700 sucrase-related, putative, expressed -
15 Sobic.007G033800 basic helix-loop-helix DND-binding domain containing protein, expressed -
16 Sobic.004G247000 -(PubMedID : 26976818)@"Gln-4(Ortholog in maize:Martin et al., 2006)"(PubMedID : 31659887)@glutamine synthetase, catalytic domain containing protein, expressed K01915: glnA, glutamine synthetase
17 Sobic.003G410100 protein kinase domain containing protein, expressed K08819: cyclin-dependent kinase 12/13
18 Sobic.001G082900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
19 Sobic.004G255600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@neutral/alkaline invertase, putative, expressed -
20 Sobic.001G301800 CS domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G330300 Sobic003G330300 Sobic001G339500 Sobic001G339500 Sobic003G330300--Sobic001G339500 Sobic003G243600 Sobic003G243600 Sobic003G330300--Sobic003G243600 Sobic001G328200 Sobic001G328200 Sobic003G330300--Sobic001G328200 Sobic010G019300 Sobic010G019300 Sobic003G330300--Sobic010G019300 Sobic003G034700 Sobic003G034700 Sobic003G330300--Sobic003G034700 Sobic008G140100 Sobic008G140100 Sobic003G330300--Sobic008G140100 Sobic001G302200 Sobic001G302200 Sobic003G330300--Sobic001G302200 Sobic009G190700 Sobic009G190700 Sobic003G330300--Sobic009G190700 Sobic010G027000 Sobic010G027000 Sobic003G330300--Sobic010G027000 Sobic002G339600 Sobic002G339600 Sobic001G339500--Sobic002G339600 Sobic002G111200 Sobic002G111200 Sobic001G339500--Sobic002G111200 Sobic003G349200 Sobic003G349200 Sobic001G339500--Sobic003G349200 Sobic006G215600 Sobic006G215600 Sobic001G339500--Sobic006G215600 Sobic004G295300 Sobic004G295300 Sobic001G339500--Sobic004G295300 Sobic007G033800 Sobic007G033800 Sobic001G339500--Sobic007G033800 Sobic006G011300 Sobic006G011300 Sobic001G339500--Sobic006G011300 Sobic003G224100 Sobic003G224100 Sobic001G339500--Sobic003G224100 Sobic006G130800 Sobic006G130800 Sobic001G339500--Sobic006G130800 Sobic001G070000 Sobic001G070000 Sobic003G243600--Sobic001G070000 Sobic003G243600--Sobic007G033800 Sobic004G136600 Sobic004G136600 Sobic003G243600--Sobic004G136600 Sobic003G243600--Sobic001G339500 Sobic003G214500 Sobic003G214500 Sobic003G243600--Sobic003G214500 Sobic003G243600--Sobic010G027000 Sobic006G254100 Sobic006G254100 Sobic003G243600--Sobic006G254100 Sobic003G243600--Sobic001G302200 Sobic003G350800 Sobic003G350800 Sobic003G243600--Sobic003G350800 Sobic010G188100 Sobic010G188100 Sobic001G328200--Sobic010G188100 Sobic009G219900 Sobic009G219900 Sobic001G328200--Sobic009G219900 Sobic006G092400 Sobic006G092400 Sobic001G328200--Sobic006G092400 Sobic010G101500 Sobic010G101500 Sobic001G328200--Sobic010G101500 Sobic003G002400 Sobic003G002400 Sobic001G328200--Sobic003G002400 Sobic003G312200 Sobic003G312200 Sobic001G328200--Sobic003G312200 Sobic002G358800 Sobic002G358800 Sobic001G328200--Sobic002G358800 Sobic007G139700 Sobic007G139700 Sobic001G328200--Sobic007G139700 Sobic002G166900 Sobic002G166900 Sobic001G328200--Sobic002G166900 Sobic001G357300 Sobic001G357300 Sobic010G019300--Sobic001G357300 Sobic003G410100 Sobic003G410100 Sobic010G019300--Sobic003G410100 Sobic009G135900 Sobic009G135900 Sobic010G019300--Sobic009G135900 Sobic001G301800 Sobic001G301800 Sobic010G019300--Sobic001G301800 Sobic001G407600 Sobic001G407600 Sobic010G019300--Sobic001G407600 Sobic010G019300--Sobic002G339600 Sobic005G026100 Sobic005G026100 Sobic010G019300--Sobic005G026100 Sobic010G019300--Sobic001G339500 Sobic003G369500 Sobic003G369500 Sobic010G019300--Sobic003G369500 Sobic001G153200 Sobic001G153200 Sobic003G034700--Sobic001G153200 Sobic010G174500 Sobic010G174500 Sobic003G034700--Sobic010G174500 Sobic005G209500 Sobic005G209500 Sobic003G034700--Sobic005G209500 Sobic002G130800 Sobic002G130800 Sobic003G034700--Sobic002G130800 Sobic007G006900 Sobic007G006900 Sobic003G034700--Sobic007G006900 Sobic001G463000 Sobic001G463000 Sobic003G034700--Sobic001G463000 Sobic003G076500 Sobic003G076500 Sobic003G034700--Sobic003G076500 Sobic001G541100 Sobic001G541100 Sobic003G034700--Sobic001G541100 Sobic001G082900 Sobic001G082900 Sobic003G034700--Sobic001G082900 Sobic003G051000 Sobic003G051000 Sobic008G140100--Sobic003G051000 Sobic001G303100 Sobic001G303100 Sobic008G140100--Sobic001G303100 Sobic010G059000 Sobic010G059000 Sobic008G140100--Sobic010G059000 Sobic001G446200 Sobic001G446200 Sobic008G140100--Sobic001G446200 Sobic007G062200 Sobic007G062200 Sobic008G140100--Sobic007G062200 Sobic009G200800 Sobic009G200800 Sobic008G140100--Sobic009G200800 Sobic007G164000 Sobic007G164000 Sobic008G140100--Sobic007G164000 Sobic003G339700 Sobic003G339700 Sobic008G140100--Sobic003G339700 Sobic001G498000 Sobic001G498000 Sobic008G140100--Sobic001G498000 Sobic001G302200--Sobic004G136600 Sobic001G302200--Sobic003G243600 Sobic001G302200--Sobic002G339600 Sobic001G302200--Sobic003G349200 Sobic001G302200--Sobic007G033800 Sobic004G317500 Sobic004G317500 Sobic001G302200--Sobic004G317500 Sobic003G277600 Sobic003G277600 Sobic001G302200--Sobic003G277600 Sobic003G266500 Sobic003G266500 Sobic001G302200--Sobic003G266500 Sobic010G023700 Sobic010G023700 Sobic001G302200--Sobic010G023700 Sobic008G059100 Sobic008G059100 Sobic009G190700--Sobic008G059100 Sobic003G313900 Sobic003G313900 Sobic009G190700--Sobic003G313900 Sobic009G190700--Sobic007G164000 Sobic003G354900 Sobic003G354900 Sobic009G190700--Sobic003G354900 Sobic001G409300 Sobic001G409300 Sobic009G190700--Sobic001G409300 Sobic009G190700--Sobic003G051000 Sobic002G187700 Sobic002G187700 Sobic009G190700--Sobic002G187700 Sobic009G190700--Sobic001G070000 Sobic003G242000 Sobic003G242000 Sobic009G190700--Sobic003G242000 Sobic003G336000 Sobic003G336000 Sobic010G027000--Sobic003G336000 Sobic002G291200 Sobic002G291200 Sobic010G027000--Sobic002G291200 Sobic010G277800 Sobic010G277800 Sobic010G027000--Sobic010G277800 Sobic009G217900 Sobic009G217900 Sobic010G027000--Sobic009G217900 Sobic010G027000--Sobic002G358800 Sobic004G058200 Sobic004G058200 Sobic010G027000--Sobic004G058200 Sobic010G027000--Sobic003G243600 Sobic001G406100 Sobic001G406100 Sobic010G027000--Sobic001G406100 Sobic002G358400 Sobic002G358400 Sobic010G027000--Sobic002G358400
Octagon: transcription factors


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