Gene annotation
Transcriptome id Sobic.004G136600.1
Synonym Sb04g015420, SbSWEET4-3,SbSWEET4-3;Sugars Will Eventually Be Exported Transporters
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Sugar transporter (PubMedID : 27330561)
Sugar transporter (PubMedID : 27330561)
nodulin MtN3 family protein, putative, expressed
UniProt C5Y0Q0
Pfam PF03083
Panther DB PTHR10791 PTHR10791:SF41
NCBI CDD KOG1623; Multitransmembrane protein
KEGG Orthology K15382; SLC50A, solute carrier family 50 (sugar transporter)
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10850 : Nodulin MtN3 family protein
RAP-DB (Rice) LOC_Os02g19820.1 : nodulin MtN3 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a019719 , Zm00025a019713 , Zm00025a019717
Brachypodium KQJ94393 , KQK17179
Barley HORVU6Hr1G055960.1 , HORVU6Hr1G055960.3 , HORVU6Hr1G055960.2 , HORVU6Hr1G055960.5 , HORVU6Hr1G055960.4 , HORVU6Hr1G055960.7 , HORVU6Hr1G055960.6
Wheat TraesCS6D02G201900 , TraesCS6B02G248300 , TraesCS6A02G218800
Populus -


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cDNA sequences
Sobic.004G136600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G236300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@shikimate kinase, putative, expressed K00891: aroK, shikimate kinase
2 Sobic.003G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
3 Sobic.001G302200 glycosyl transferase 8 domain containing protein, putative, expressed -
4 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
5 Sobic.006G180200 transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
6 Sobic.002G245400 citrate transporter, putative, expressed K14445: solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
7 Sobic.003G337000 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
8 Sobic.002G066400 OsFBDUF18 - F-box and DUF domain containing protein, expressed -
9 Sobic.002G355300 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
10 Sobic.001G397500 AMP-binding enzyme, putative, expressed -
11 Sobic.004G069850 - -
12 Sobic.004G330700 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
13 Sobic.002G134001 - K14490: histidine-containing phosphotransfer peotein
14 Sobic.001G032000 peptide transporter PTR2, putative, expressed -
15 Sobic.009G146800 potassium channel AKT2/3, putative, expressed -
16 Sobic.003G279300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoethanolamine/phosphocholine phosphatase, putative, expressed K06124: phosphoethanolamine/phosphocholine phosphatase
17 Sobic.006G254100 GTP cyclohydrolase I 1, putative, expressed K01495: GCH1, GTP cyclohydrolase IA
18 Sobic.002G363400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
19 Sobic.004G055200 phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
20 Sobic.004G219300 GLTP domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G136600 Sobic004G136600 Sobic004G236300 Sobic004G236300 Sobic004G136600--Sobic004G236300 Sobic003G243600 Sobic003G243600 Sobic004G136600--Sobic003G243600 Sobic001G302200 Sobic001G302200 Sobic004G136600--Sobic001G302200 Sobic003G130800 Sobic003G130800 Sobic004G136600--Sobic003G130800 Sobic006G180200 Sobic006G180200 Sobic004G136600--Sobic006G180200 Sobic002G245400 Sobic002G245400 Sobic004G136600--Sobic002G245400 Sobic003G337000 Sobic003G337000 Sobic004G136600--Sobic003G337000 Sobic002G066400 Sobic002G066400 Sobic004G136600--Sobic002G066400 Sobic002G355300 Sobic002G355300 Sobic004G136600--Sobic002G355300 Sobic006G100600 Sobic006G100600 Sobic004G236300--Sobic006G100600 Sobic004G130100 Sobic004G130100 Sobic004G236300--Sobic004G130100 Sobic002G255200 Sobic002G255200 Sobic004G236300--Sobic002G255200 Sobic004G236300--Sobic002G355300 Sobic004G236300--Sobic003G337000 Sobic006G232200 Sobic006G232200 Sobic004G236300--Sobic006G232200 Sobic004G055200 Sobic004G055200 Sobic004G236300--Sobic004G055200 Sobic004G236300--Sobic004G136600 Sobic001G388600 Sobic001G388600 Sobic004G236300--Sobic001G388600 Sobic001G070000 Sobic001G070000 Sobic003G243600--Sobic001G070000 Sobic007G033800 Sobic007G033800 Sobic003G243600--Sobic007G033800 Sobic003G243600--Sobic004G136600 Sobic001G339500 Sobic001G339500 Sobic003G243600--Sobic001G339500 Sobic003G214500 Sobic003G214500 Sobic003G243600--Sobic003G214500 Sobic010G027000 Sobic010G027000 Sobic003G243600--Sobic010G027000 Sobic006G254100 Sobic006G254100 Sobic003G243600--Sobic006G254100 Sobic003G243600--Sobic001G302200 Sobic003G350800 Sobic003G350800 Sobic003G243600--Sobic003G350800 Sobic001G302200--Sobic004G136600 Sobic001G302200--Sobic003G243600 Sobic002G339600 Sobic002G339600 Sobic001G302200--Sobic002G339600 Sobic003G349200 Sobic003G349200 Sobic001G302200--Sobic003G349200 Sobic001G302200--Sobic007G033800 Sobic004G317500 Sobic004G317500 Sobic001G302200--Sobic004G317500 Sobic003G277600 Sobic003G277600 Sobic001G302200--Sobic003G277600 Sobic003G266500 Sobic003G266500 Sobic001G302200--Sobic003G266500 Sobic010G023700 Sobic010G023700 Sobic001G302200--Sobic010G023700 Sobic009G185800 Sobic009G185800 Sobic003G130800--Sobic009G185800 Sobic003G253000 Sobic003G253000 Sobic003G130800--Sobic003G253000 Sobic001G459200 Sobic001G459200 Sobic003G130800--Sobic001G459200 Sobic003G130800--Sobic006G180200 Sobic002G345300 Sobic002G345300 Sobic003G130800--Sobic002G345300 Sobic004G049900 Sobic004G049900 Sobic003G130800--Sobic004G049900 Sobic003G130800--Sobic004G055200 Sobic010G135000 Sobic010G135000 Sobic003G130800--Sobic010G135000 Sobic003G181500 Sobic003G181500 Sobic003G130800--Sobic003G181500 Sobic006G180200--Sobic003G130800 Sobic006G180200--Sobic010G135000 Sobic006G180200--Sobic009G185800 Sobic006G180200--Sobic004G055200 Sobic001G131400 Sobic001G131400 Sobic006G180200--Sobic001G131400 Sobic008G033600 Sobic008G033600 Sobic006G180200--Sobic008G033600 Sobic004G187900 Sobic004G187900 Sobic006G180200--Sobic004G187900 Sobic006G180200--Sobic003G181500 Sobic008G189300 Sobic008G189300 Sobic006G180200--Sobic008G189300 Sobic002G245400--Sobic004G136600 Sobic005G228700 Sobic005G228700 Sobic002G245400--Sobic005G228700 Sobic002G245400--Sobic003G243600 Sobic001G158500 Sobic001G158500 Sobic002G245400--Sobic001G158500 Sobic002G045300 Sobic002G045300 Sobic002G245400--Sobic002G045300 Sobic001G034100 Sobic001G034100 Sobic002G245400--Sobic001G034100 Sobic001G147200 Sobic001G147200 Sobic002G245400--Sobic001G147200 Sobic002G313800 Sobic002G313800 Sobic002G245400--Sobic002G313800 Sobic001G082900 Sobic001G082900 Sobic002G245400--Sobic001G082900 Sobic009G174900 Sobic009G174900 Sobic003G337000--Sobic009G174900 Sobic001G415500 Sobic001G415500 Sobic003G337000--Sobic001G415500 Sobic001G054200 Sobic001G054200 Sobic003G337000--Sobic001G054200 Sobic003G337000--Sobic006G232200 Sobic008G161800 Sobic008G161800 Sobic003G337000--Sobic008G161800 Sobic004G248800 Sobic004G248800 Sobic003G337000--Sobic004G248800 Sobic003G337000--Sobic003G253000 Sobic003G337000--Sobic009G185800 Sobic009G135600 Sobic009G135600 Sobic003G337000--Sobic009G135600 Sobic002G330000 Sobic002G330000 Sobic002G066400--Sobic002G330000 Sobic002G066400--Sobic003G181500 Sobic009G230100 Sobic009G230100 Sobic002G066400--Sobic009G230100 Sobic009G023200 Sobic009G023200 Sobic002G066400--Sobic009G023200 Sobic003G321700 Sobic003G321700 Sobic002G066400--Sobic003G321700 Sobic004G308400 Sobic004G308400 Sobic002G066400--Sobic004G308400 Sobic010G003700 Sobic010G003700 Sobic002G066400--Sobic010G003700 Sobic003G350300 Sobic003G350300 Sobic002G066400--Sobic003G350300 Sobic010G237000 Sobic010G237000 Sobic002G066400--Sobic010G237000 Sobic003G386000 Sobic003G386000 Sobic002G355300--Sobic003G386000 Sobic001G040800 Sobic001G040800 Sobic002G355300--Sobic001G040800 Sobic002G355300--Sobic004G055200 Sobic002G355300--Sobic006G232200 Sobic003G155400 Sobic003G155400 Sobic002G355300--Sobic003G155400 Sobic002G222900 Sobic002G222900 Sobic002G355300--Sobic002G222900 Sobic002G355300--Sobic001G459200 Sobic007G019100 Sobic007G019100 Sobic002G355300--Sobic007G019100 Sobic004G170400 Sobic004G170400 Sobic002G355300--Sobic004G170400
Octagon: transcription factors


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