Gene annotation
Transcriptome id Sobic.001G397500.1
Synonym ACN1, AAE7, Sb01g037610
Functional annotation AMP-binding enzyme, putative, expressed
UniProt C5WMI4
Pfam PF13193 PF00501
Panther DB PTHR24095 PTHR24095:SF169
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT3G16910 : acyl-activating enzyme 7
RAP-DB (Rice) LOC_Os03g19240.1 : AMP-binding enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a018738 , Zm00025a002116 , Zm00025a052585
Brachypodium KQK22027 , KQK22026 , KQK22025 , PNT77543
Barley HORVU4Hr1G054210.6 , HORVU4Hr1G054210.4 , HORVU4Hr1G054210.5 , HORVU4Hr1G054210.2 , HORVU4Hr1G054210.3 , HORVU4Hr1G054210.1 , HORVU6Hr1G011140.13 , HORVU6Hr1G011140.14 , HORVU6Hr1G011140.1 , HORVU6Hr1G011140.4 , HORVU6Hr1G011140.9
Wheat TraesCSU02G121800 , TraesCS4D02G186800 , TraesCS6A02G059400 , TraesCS4B02G185400 , TraesCS6B02G079800 , TraesCS4A02G119100 , TraesCS4D02G186700 , TraesCS4A02G119200
Populus -


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cDNA sequences
Sobic.001G397500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G337925 - -
2 Sobic.004G136600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
3 Sobic.003G215200 expressed protein -
4 Sobic.001G451500 Cytosolic glutamine synthase1.4(PubMedID : 26317421)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@glutamine synthetase, catalytic domain containing protein, expressed K01915: glnA, glutamine synthetase
5 Sobic.006G254100 GTP cyclohydrolase I 1, putative, expressed K01495: GCH1, GTP cyclohydrolase IA
6 Sobic.003G327900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
7 Sobic.006G011400 OsSub35 - Putative Subtilisin homologue, expressed -
8 Sobic.005G026600 pentatricopeptide, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
9 Sobic.003G184100 auxin-induced protein 5NG4, putative, expressed -
10 Sobic.002G120400 flavin monooxygenase, putative, expressed -
11 Sobic.007G008200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@invertase/pectin methylesterase inhibitor family protein, putative, expressed -
12 Sobic.009G033600 "OsSAMS1(Ortholog in rice:Chen et al., 2013)"(PubMedID : 31659917)@S-adenosylmethionine synthetase, putative, expressed K00789: S-adenosylmethionine synthetase
13 Sobic.002G134001 - K14490: histidine-containing phosphotransfer peotein
14 Sobic.001G185800 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
15 Sobic.003G157600 expressed protein -
16 Sobic.001G354100 protein kinase domain containing protein, expressed -
17 Sobic.004G066600 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
18 Sobic.003G254800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA5 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
19 Sobic.001G528300 heavy metal-associated domain containing protein, expressed -
20 Sobic.010G003700 scarecrow, putative, expressed -


Gene co-expression network
sample Sobic001G397500 Sobic001G397500 Sobic004G337925 Sobic004G337925 Sobic001G397500--Sobic004G337925 Sobic004G136600 Sobic004G136600 Sobic001G397500--Sobic004G136600 Sobic003G215200 Sobic003G215200 Sobic001G397500--Sobic003G215200 Sobic001G451500 Sobic001G451500 Sobic001G397500--Sobic001G451500 Sobic006G254100 Sobic006G254100 Sobic001G397500--Sobic006G254100 Sobic003G327900 Sobic003G327900 Sobic001G397500--Sobic003G327900 Sobic006G011400 Sobic006G011400 Sobic001G397500--Sobic006G011400 Sobic005G026600 Sobic005G026600 Sobic001G397500--Sobic005G026600 Sobic003G184100 Sobic003G184100 Sobic001G397500--Sobic003G184100 Sobic007G136100 Sobic007G136100 Sobic004G337925--Sobic007G136100 Sobic003G261500 Sobic003G261500 Sobic004G337925--Sobic003G261500 Sobic004G337925--Sobic006G254100 Sobic010G193900 Sobic010G193900 Sobic004G337925--Sobic010G193900 Sobic004G337925--Sobic001G397500 Sobic002G262400 Sobic002G262400 Sobic004G337925--Sobic002G262400 Sobic003G055700 Sobic003G055700 Sobic004G337925--Sobic003G055700 Sobic008G046800 Sobic008G046800 Sobic004G337925--Sobic008G046800 Sobic006G176600 Sobic006G176600 Sobic004G337925--Sobic006G176600 Sobic004G236300 Sobic004G236300 Sobic004G136600--Sobic004G236300 Sobic003G243600 Sobic003G243600 Sobic004G136600--Sobic003G243600 Sobic001G302200 Sobic001G302200 Sobic004G136600--Sobic001G302200 Sobic003G130800 Sobic003G130800 Sobic004G136600--Sobic003G130800 Sobic006G180200 Sobic006G180200 Sobic004G136600--Sobic006G180200 Sobic002G245400 Sobic002G245400 Sobic004G136600--Sobic002G245400 Sobic003G337000 Sobic003G337000 Sobic004G136600--Sobic003G337000 Sobic002G066400 Sobic002G066400 Sobic004G136600--Sobic002G066400 Sobic002G355300 Sobic002G355300 Sobic004G136600--Sobic002G355300 Sobic003G417100 Sobic003G417100 Sobic003G215200--Sobic003G417100 Sobic006G230300 Sobic006G230300 Sobic003G215200--Sobic006G230300 Sobic004G262200 Sobic004G262200 Sobic003G215200--Sobic004G262200 Sobic003G157600 Sobic003G157600 Sobic003G215200--Sobic003G157600 Sobic010G194100 Sobic010G194100 Sobic003G215200--Sobic010G194100 Sobic006G157900 Sobic006G157900 Sobic003G215200--Sobic006G157900 Sobic002G183700 Sobic002G183700 Sobic003G215200--Sobic002G183700 Sobic002G042200 Sobic002G042200 Sobic003G215200--Sobic002G042200 Sobic003G228600 Sobic003G228600 Sobic003G215200--Sobic003G228600 Sobic001G451500--Sobic004G337925 Sobic001G451500--Sobic001G397500 Sobic004G106300 Sobic004G106300 Sobic001G451500--Sobic004G106300 Sobic002G004800 Sobic002G004800 Sobic001G451500--Sobic002G004800 Sobic002G126600 Sobic002G126600 Sobic001G451500--Sobic002G126600 Sobic010G027000 Sobic010G027000 Sobic001G451500--Sobic010G027000 Sobic003G059000 Sobic003G059000 Sobic001G451500--Sobic003G059000 Sobic002G233100 Sobic002G233100 Sobic001G451500--Sobic002G233100 Sobic001G185800 Sobic001G185800 Sobic001G451500--Sobic001G185800 Sobic003G214500 Sobic003G214500 Sobic006G254100--Sobic003G214500 Sobic001G473300 Sobic001G473300 Sobic006G254100--Sobic001G473300 Sobic004G235000 Sobic004G235000 Sobic006G254100--Sobic004G235000 Sobic003G355200 Sobic003G355200 Sobic006G254100--Sobic003G355200 Sobic003G370900 Sobic003G370900 Sobic006G254100--Sobic003G370900 Sobic009G229200 Sobic009G229200 Sobic006G254100--Sobic009G229200 Sobic006G254100--Sobic003G243600 Sobic009G084000 Sobic009G084000 Sobic006G254100--Sobic009G084000 Sobic003G264200 Sobic003G264200 Sobic006G254100--Sobic003G264200 Sobic003G327900--Sobic002G042200 Sobic010G270700 Sobic010G270700 Sobic003G327900--Sobic010G270700 SobicK026900 SobicK026900 Sobic003G327900--SobicK026900 Sobic004G297900 Sobic004G297900 Sobic003G327900--Sobic004G297900 Sobic004G202400 Sobic004G202400 Sobic003G327900--Sobic004G202400 Sobic007G090469 Sobic007G090469 Sobic003G327900--Sobic007G090469 Sobic004G209400 Sobic004G209400 Sobic003G327900--Sobic004G209400 Sobic002G261500 Sobic002G261500 Sobic003G327900--Sobic002G261500 Sobic003G327900--Sobic002G183700 Sobic003G384700 Sobic003G384700 Sobic006G011400--Sobic003G384700 Sobic006G011400--Sobic003G157600 Sobic008G148200 Sobic008G148200 Sobic006G011400--Sobic008G148200 Sobic001G360400 Sobic001G360400 Sobic006G011400--Sobic001G360400 Sobic001G301300 Sobic001G301300 Sobic006G011400--Sobic001G301300 Sobic006G122800 Sobic006G122800 Sobic006G011400--Sobic006G122800 Sobic001G354100 Sobic001G354100 Sobic006G011400--Sobic001G354100 Sobic006G011400--Sobic003G184100 Sobic010G161800 Sobic010G161800 Sobic006G011400--Sobic010G161800 Sobic001G282100 Sobic001G282100 Sobic005G026600--Sobic001G282100 Sobic003G107600 Sobic003G107600 Sobic005G026600--Sobic003G107600 Sobic010G182300 Sobic010G182300 Sobic005G026600--Sobic010G182300 Sobic002G258800 Sobic002G258800 Sobic005G026600--Sobic002G258800 Sobic007G008200 Sobic007G008200 Sobic005G026600--Sobic007G008200 Sobic009G033600 Sobic009G033600 Sobic005G026600--Sobic009G033600 Sobic004G066600 Sobic004G066600 Sobic005G026600--Sobic004G066600 Sobic002G155500 Sobic002G155500 Sobic005G026600--Sobic002G155500 Sobic003G280400 Sobic003G280400 Sobic005G026600--Sobic003G280400 Sobic003G184100--Sobic003G157600 Sobic003G184100--Sobic004G202400 Sobic006G044100 Sobic006G044100 Sobic003G184100--Sobic006G044100 Sobic006G197100 Sobic006G197100 Sobic003G184100--Sobic006G197100 Sobic001G416200 Sobic001G416200 Sobic003G184100--Sobic001G416200 Sobic004G046200 Sobic004G046200 Sobic003G184100--Sobic004G046200 Sobic004G042000 Sobic004G042000 Sobic003G184100--Sobic004G042000 Sobic004G349125 Sobic004G349125 Sobic003G184100--Sobic004G349125 Sobic001G481400 Sobic001G481400 Sobic003G184100--Sobic001G481400
Octagon: transcription factors


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