Gene annotation
Transcriptome id Sobic.007G008200.3,Sobic.007G008200.2
Synonym C/VIF2, ATC/VIF2, Sb07g000870
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
invertase/pectin methylesterase inhibitor family protein, putative, expressed
UniProt A0A1B6PES9
Pfam PF04043
Panther DB PTHR31080 PTHR31080:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004857; enzyme inhibitor activity


Orthologs (automatic annotation)
TAIR AT5G64620 : cell wall / vacuolar inhibitor of fructosidase 2
RAP-DB (Rice) LOC_Os08g01670.1 : invertase/pectin methylesterase inhibitor family protein, putative, expressed
MaizeGDB (Corn) Zm00025a030307 , Zm00025a040171 , Zm00025a040172
Brachypodium -
Barley HORVU7Hr1G077430.1 , HORVU7Hr1G077430.2
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G066600 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
2 Sobic.007G161400 Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
K13348: protein Mpv17
3 Sobic.008G128900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
4 Sobic.003G184100 auxin-induced protein 5NG4, putative, expressed -
5 Sobic.001G049900 UDP-rhamnose rhamnosyltransferase, putative, expressed -
6 Sobic.005G188100 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
7 Sobic.007G078100 UPF0041 domain containing protein, putative, expressed -
8 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.001G494000 Expressed in older stem(PubMedID : 28649278)@homeodomain protein, putative, expressed -
10 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
11 Sobic.002G257300 ribulose-phosphate 3-epimerase, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
12 Sobic.010G067400 receptor-like protein kinase precursor, putative, expressed -
13 Sobic.010G182600 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
14 Sobic.004G051700 OTU-like cysteine protease family protein, putative, expressed K13719: OTU1, ubiquitin thioesterase OTU1
15 Sobic.001G048832 - -
16 Sobic.003G280400 hexokinase, putative, expressed K00844: hexokinase
17 Sobic.007G087200 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
18 Sobic.004G101300 expressed protein -
19 Sobic.002G185800 transporter, putative, expressed -
20 Sobic.003G363800 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae


Gene co-expression network
sample Sobic007G008200 Sobic007G008200 Sobic004G066600 Sobic004G066600 Sobic007G008200--Sobic004G066600 Sobic007G161400 Sobic007G161400 Sobic007G008200--Sobic007G161400 Sobic008G128900 Sobic008G128900 Sobic007G008200--Sobic008G128900 Sobic003G184100 Sobic003G184100 Sobic007G008200--Sobic003G184100 Sobic001G049900 Sobic001G049900 Sobic007G008200--Sobic001G049900 Sobic005G188100 Sobic005G188100 Sobic007G008200--Sobic005G188100 Sobic007G078100 Sobic007G078100 Sobic007G008200--Sobic007G078100 Sobic002G003800 Sobic002G003800 Sobic007G008200--Sobic002G003800 Sobic001G494000 Sobic001G494000 Sobic007G008200--Sobic001G494000 Sobic010G239500 Sobic010G239500 Sobic004G066600--Sobic010G239500 Sobic002G176100 Sobic002G176100 Sobic004G066600--Sobic002G176100 Sobic002G345300 Sobic002G345300 Sobic004G066600--Sobic002G345300 Sobic004G101300 Sobic004G101300 Sobic004G066600--Sobic004G101300 Sobic003G319500 Sobic003G319500 Sobic004G066600--Sobic003G319500 Sobic003G429000 Sobic003G429000 Sobic004G066600--Sobic003G429000 Sobic007G087200 Sobic007G087200 Sobic004G066600--Sobic007G087200 Sobic004G066600--Sobic005G188100 Sobic002G190900 Sobic002G190900 Sobic004G066600--Sobic002G190900 Sobic003G280400 Sobic003G280400 Sobic007G161400--Sobic003G280400 Sobic007G161400--Sobic008G128900 Sobic006G059700 Sobic006G059700 Sobic007G161400--Sobic006G059700 Sobic004G042000 Sobic004G042000 Sobic007G161400--Sobic004G042000 Sobic005G043000 Sobic005G043000 Sobic007G161400--Sobic005G043000 Sobic007G161400--Sobic007G078100 Sobic002G312900 Sobic002G312900 Sobic007G161400--Sobic002G312900 Sobic003G363800 Sobic003G363800 Sobic007G161400--Sobic003G363800 Sobic004G051700 Sobic004G051700 Sobic007G161400--Sobic004G051700 Sobic008G128900--Sobic002G312900 Sobic008G128900--Sobic007G161400 Sobic003G416300 Sobic003G416300 Sobic008G128900--Sobic003G416300 Sobic008G128900--Sobic001G494000 Sobic008G128900--Sobic005G043000 Sobic007G127100 Sobic007G127100 Sobic008G128900--Sobic007G127100 Sobic008G128900--Sobic003G363800 Sobic010G195500 Sobic010G195500 Sobic008G128900--Sobic010G195500 Sobic008G128900--Sobic003G280400 Sobic003G157600 Sobic003G157600 Sobic003G184100--Sobic003G157600 Sobic004G202400 Sobic004G202400 Sobic003G184100--Sobic004G202400 Sobic006G044100 Sobic006G044100 Sobic003G184100--Sobic006G044100 Sobic006G197100 Sobic006G197100 Sobic003G184100--Sobic006G197100 Sobic001G416200 Sobic001G416200 Sobic003G184100--Sobic001G416200 Sobic004G046200 Sobic004G046200 Sobic003G184100--Sobic004G046200 Sobic003G184100--Sobic004G042000 Sobic004G349125 Sobic004G349125 Sobic003G184100--Sobic004G349125 Sobic001G481400 Sobic001G481400 Sobic003G184100--Sobic001G481400 Sobic003G311800 Sobic003G311800 Sobic001G049900--Sobic003G311800 Sobic001G049900--Sobic002G003800 Sobic010G184800 Sobic010G184800 Sobic001G049900--Sobic010G184800 Sobic009G109000 Sobic009G109000 Sobic001G049900--Sobic009G109000 Sobic001G430100 Sobic001G430100 Sobic001G049900--Sobic001G430100 Sobic001G049900--Sobic006G197100 Sobic008G055100 Sobic008G055100 Sobic001G049900--Sobic008G055100 Sobic001G049900--Sobic004G042000 Sobic004G310200 Sobic004G310200 Sobic001G049900--Sobic004G310200 Sobic005G188100--Sobic002G190900 Sobic009G163800 Sobic009G163800 Sobic005G188100--Sobic009G163800 Sobic002G398901 Sobic002G398901 Sobic005G188100--Sobic002G398901 Sobic010G204500 Sobic010G204500 Sobic005G188100--Sobic010G204500 Sobic009G166500 Sobic009G166500 Sobic005G188100--Sobic009G166500 Sobic007G051000 Sobic007G051000 Sobic005G188100--Sobic007G051000 Sobic006G047400 Sobic006G047400 Sobic005G188100--Sobic006G047400 Sobic010G012500 Sobic010G012500 Sobic005G188100--Sobic010G012500 Sobic004G211833 Sobic004G211833 Sobic005G188100--Sobic004G211833 Sobic004G276100 Sobic004G276100 Sobic007G078100--Sobic004G276100 Sobic002G257300 Sobic002G257300 Sobic007G078100--Sobic002G257300 Sobic007G078100--Sobic007G161400 Sobic010G154700 Sobic010G154700 Sobic007G078100--Sobic010G154700 Sobic004G272800 Sobic004G272800 Sobic007G078100--Sobic004G272800 Sobic007G078100--Sobic004G051700 Sobic007G078100--Sobic005G188100 Sobic001G132100 Sobic001G132100 Sobic007G078100--Sobic001G132100 Sobic001G048832 Sobic001G048832 Sobic007G078100--Sobic001G048832 Sobic002G003800--Sobic006G197100 Sobic002G003800--Sobic004G042000 Sobic002G003800--Sobic003G311800 Sobic001G302600 Sobic001G302600 Sobic002G003800--Sobic001G302600 Sobic002G003800--Sobic001G049900 Sobic002G003800--Sobic001G416200 Sobic002G003800--Sobic004G310200 Sobic003G079400 Sobic003G079400 Sobic002G003800--Sobic003G079400 Sobic001G304100 Sobic001G304100 Sobic002G003800--Sobic001G304100 Sobic008G106700 Sobic008G106700 Sobic001G494000--Sobic008G106700 Sobic003G343900 Sobic003G343900 Sobic001G494000--Sobic003G343900 Sobic007G186100 Sobic007G186100 Sobic001G494000--Sobic007G186100 Sobic001G494000--Sobic004G046200 Sobic003G219800 Sobic003G219800 Sobic001G494000--Sobic003G219800 Sobic001G494000--Sobic010G195500 Sobic001G494000--Sobic003G079400 Sobic010G062100 Sobic010G062100 Sobic001G494000--Sobic010G062100 Sobic001G494000--Sobic002G003800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.