Gene annotation
Transcriptome id Sobic.002G365700.1
Synonym Sb02g038480
Functional annotation -
UniProt A0A1B6QFE5
Pfam -
Panther DB PTHR33088
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G365700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G188100 nitrilase-associated protein, putative, expressed K18635: protein SPIRAL1 and related proteins
2 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
4 Sobic.003G146200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@two-component response regulator, putative, expressed -
5 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.001G510000 cytochrome P450 86A1, putative, expressed -
7 Sobic.001G468300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
8 Sobic.009G056400 fasciclin domain containing protein, expressed -
9 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
10 Sobic.005G169700 targeting protein for Xklp2, putative, expressed -
11 Sobic.010G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.006G066500 expressed protein -
13 Sobic.006G001000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450 93A2, putative, expressed -
14 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
15 Sobic.005G135700 chalcone and stilbene synthases, putative, expressed -
16 Sobic.003G085200 expressed protein -
17 Sobic.005G132300 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
18 Sobic.010G108301 - K15397: 3-ketoacyl-CoA synthase
19 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
20 Sobic.003G414100 tropinone reductase, putative, expressed K08081: tropinone reductase I


Gene co-expression network
sample Sobic002G365700 Sobic002G365700 Sobic006G188100 Sobic006G188100 Sobic002G365700--Sobic006G188100 Sobic003G352800 Sobic003G352800 Sobic002G365700--Sobic003G352800 Sobic007G027200 Sobic007G027200 Sobic002G365700--Sobic007G027200 Sobic003G146200 Sobic003G146200 Sobic002G365700--Sobic003G146200 Sobic006G166800 Sobic006G166800 Sobic002G365700--Sobic006G166800 Sobic001G510000 Sobic001G510000 Sobic002G365700--Sobic001G510000 Sobic001G468300 Sobic001G468300 Sobic002G365700--Sobic001G468300 Sobic009G056400 Sobic009G056400 Sobic002G365700--Sobic009G056400 Sobic003G427900 Sobic003G427900 Sobic002G365700--Sobic003G427900 Sobic008G005400 Sobic008G005400 Sobic006G188100--Sobic008G005400 Sobic010G108301 Sobic010G108301 Sobic006G188100--Sobic010G108301 Sobic003G414100 Sobic003G414100 Sobic006G188100--Sobic003G414100 Sobic002G267000 Sobic002G267000 Sobic006G188100--Sobic002G267000 Sobic006G188100--Sobic001G510000 Sobic007G138800 Sobic007G138800 Sobic006G188100--Sobic007G138800 Sobic005G135000 Sobic005G135000 Sobic006G188100--Sobic005G135000 Sobic001G173100 Sobic001G173100 Sobic006G188100--Sobic001G173100 Sobic010G108600 Sobic010G108600 Sobic006G188100--Sobic010G108600 Sobic003G352800--Sobic006G166800 Sobic009G162800 Sobic009G162800 Sobic003G352800--Sobic009G162800 Sobic003G352800--Sobic007G027200 Sobic002G003200 Sobic002G003200 Sobic003G352800--Sobic002G003200 Sobic009G241600 Sobic009G241600 Sobic003G352800--Sobic009G241600 Sobic008G059800 Sobic008G059800 Sobic003G352800--Sobic008G059800 Sobic009G153800 Sobic009G153800 Sobic003G352800--Sobic009G153800 Sobic003G352800--Sobic003G427900 Sobic010G196400 Sobic010G196400 Sobic003G352800--Sobic010G196400 Sobic007G027200--Sobic006G166800 Sobic001G510200 Sobic001G510200 Sobic007G027200--Sobic001G510200 Sobic007G027200--Sobic009G241600 Sobic002G394700 Sobic002G394700 Sobic007G027200--Sobic002G394700 Sobic003G153400 Sobic003G153400 Sobic007G027200--Sobic003G153400 Sobic010G199700 Sobic010G199700 Sobic007G027200--Sobic010G199700 Sobic007G027200--Sobic003G352800 Sobic007G027200--Sobic009G162800 Sobic007G043800 Sobic007G043800 Sobic007G027200--Sobic007G043800 Sobic003G146200--Sobic010G108301 Sobic003G146200--Sobic007G138800 Sobic003G146200--Sobic006G188100 Sobic003G146200--Sobic003G414100 Sobic003G146200--Sobic002G267000 Sobic003G146200--Sobic006G166800 Sobic003G146200--Sobic001G173100 Sobic003G146200--Sobic008G005400 Sobic003G146200--Sobic005G135000 Sobic006G166800--Sobic007G027200 Sobic006G166800--Sobic009G162800 Sobic006G166800--Sobic001G510200 Sobic006G166800--Sobic003G352800 Sobic006G166800--Sobic003G153400 Sobic006G166800--Sobic002G394700 Sobic006G166800--Sobic010G196400 Sobic006G166800--Sobic007G043800 Sobic006G166800--Sobic009G241600 Sobic001G510000--Sobic006G188100 Sobic001G510000--Sobic010G108301 Sobic001G510000--Sobic003G414100 Sobic005G135700 Sobic005G135700 Sobic001G510000--Sobic005G135700 Sobic001G510000--Sobic008G005400 Sobic001G510000--Sobic003G146200 Sobic001G510000--Sobic002G267000 Sobic001G510000--Sobic007G138800 Sobic001G510000--Sobic007G027200 Sobic003G236701 Sobic003G236701 Sobic001G468300--Sobic003G236701 Sobic009G048000 Sobic009G048000 Sobic001G468300--Sobic009G048000 Sobic006G066500 Sobic006G066500 Sobic001G468300--Sobic006G066500 Sobic001G468300--Sobic010G199700 Sobic001G468300--Sobic009G241600 Sobic002G332300 Sobic002G332300 Sobic001G468300--Sobic002G332300 Sobic003G112200 Sobic003G112200 Sobic001G468300--Sobic003G112200 Sobic006G226200 Sobic006G226200 Sobic001G468300--Sobic006G226200 Sobic001G468300--Sobic008G059800 Sobic004G170600 Sobic004G170600 Sobic009G056400--Sobic004G170600 Sobic009G056400--Sobic003G352800 Sobic006G139300 Sobic006G139300 Sobic009G056400--Sobic006G139300 Sobic005G088500 Sobic005G088500 Sobic009G056400--Sobic005G088500 Sobic009G056400--Sobic005G135700 Sobic009G056400--Sobic002G003200 Sobic009G196200 Sobic009G196200 Sobic009G056400--Sobic009G196200 Sobic009G056400--Sobic006G166800 Sobic009G056400--Sobic007G027200 Sobic003G427900--Sobic003G352800 Sobic010G086800 Sobic010G086800 Sobic003G427900--Sobic010G086800 Sobic003G296400 Sobic003G296400 Sobic003G427900--Sobic003G296400 Sobic003G427900--Sobic006G066500 Sobic009G226900 Sobic009G226900 Sobic003G427900--Sobic009G226900 Sobic003G427900--Sobic001G468300 Sobic006G036400 Sobic006G036400 Sobic003G427900--Sobic006G036400 Sobic003G386200 Sobic003G386200 Sobic003G427900--Sobic003G386200 Sobic003G062000 Sobic003G062000 Sobic003G427900--Sobic003G062000
Octagon: transcription factors


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