Gene annotation
Transcriptome id Sobic.002G382800.1
Synonym Sb02g039920
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6QFP3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g43480.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.002G382800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G269300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
2 Sobic.001G104600 expressed protein -
3 Sobic.001G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
4 Sobic.001G289500 kinase, pfkB family, putative, expressed -
5 Sobic.002G381700 WD-40 repeat family protein, putative, expressed -
6 Sobic.008G064700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VTC2, putative, expressed K14190: GDP-L-galactose phosphorylase
7 Sobic.002G314300 OsAPRL1 adenosine 5\'-phosphosulfate reductase-like OsAPRL1, expressed K05907: adenylyl-sulfate reductase (glutathione)
8 Sobic.004G238600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@starch synthase, putative, expressed K00703: starch synthase
9 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
10 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
11 Sobic.003G028900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.009G129300 heat shock protein DnaJ, putative, expressed -
13 Sobic.007G161500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PGR5, putative, expressed -
14 Sobic.002G116000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Granule -bound starch synthase 1b (Os)(PubMedID : 27208977)@"GbssIIa(Ortholog in maize:Jiang et al., 2013)"(PubMedID : 31659853)@starch synthase, putative, expressed K13679: granule-bound starch synthase
15 Sobic.001G020100 expressed protein -
16 Sobic.001G498000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
17 Sobic.004G223400 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
18 Sobic.002G306800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monooxygenase, putative, expressed -
19 Sobic.006G130300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed K19269: PGP, phosphoglycolate phosphatase
20 Sobic.003G005000 expressed protein -


Gene co-expression network
sample Sobic002G382800 Sobic002G382800 Sobic003G269300 Sobic003G269300 Sobic002G382800--Sobic003G269300 Sobic001G104600 Sobic001G104600 Sobic002G382800--Sobic001G104600 Sobic001G181000 Sobic001G181000 Sobic002G382800--Sobic001G181000 Sobic001G289500 Sobic001G289500 Sobic002G382800--Sobic001G289500 Sobic002G381700 Sobic002G381700 Sobic002G382800--Sobic002G381700 Sobic008G064700 Sobic008G064700 Sobic002G382800--Sobic008G064700 Sobic002G314300 Sobic002G314300 Sobic002G382800--Sobic002G314300 Sobic004G238600 Sobic004G238600 Sobic002G382800--Sobic004G238600 Sobic002G382700 Sobic002G382700 Sobic002G382800--Sobic002G382700 Sobic003G269300--Sobic008G064700 Sobic009G225600 Sobic009G225600 Sobic003G269300--Sobic009G225600 Sobic001G485100 Sobic001G485100 Sobic003G269300--Sobic001G485100 Sobic001G046000 Sobic001G046000 Sobic003G269300--Sobic001G046000 Sobic002G047400 Sobic002G047400 Sobic003G269300--Sobic002G047400 Sobic003G228300 Sobic003G228300 Sobic003G269300--Sobic003G228300 Sobic003G186800 Sobic003G186800 Sobic003G269300--Sobic003G186800 Sobic006G221000 Sobic006G221000 Sobic003G269300--Sobic006G221000 Sobic001G207800 Sobic001G207800 Sobic003G269300--Sobic001G207800 Sobic001G104700 Sobic001G104700 Sobic001G104600--Sobic001G104700 Sobic001G015200 Sobic001G015200 Sobic001G104600--Sobic001G015200 Sobic007G046950 Sobic007G046950 Sobic001G104600--Sobic007G046950 Sobic001G411100 Sobic001G411100 Sobic001G104600--Sobic001G411100 Sobic002G030900 Sobic002G030900 Sobic001G104600--Sobic002G030900 Sobic003G103300 Sobic003G103300 Sobic001G104600--Sobic003G103300 Sobic005G172400 Sobic005G172400 Sobic001G104600--Sobic005G172400 Sobic002G370600 Sobic002G370600 Sobic001G104600--Sobic002G370600 Sobic010G101000 Sobic010G101000 Sobic001G104600--Sobic010G101000 Sobic003G175800 Sobic003G175800 Sobic001G181000--Sobic003G175800 Sobic006G020300 Sobic006G020300 Sobic001G181000--Sobic006G020300 Sobic002G052100 Sobic002G052100 Sobic001G181000--Sobic002G052100 Sobic007G163433 Sobic007G163433 Sobic001G181000--Sobic007G163433 Sobic003G340350 Sobic003G340350 Sobic001G181000--Sobic003G340350 Sobic008G012100 Sobic008G012100 Sobic001G181000--Sobic008G012100 Sobic002G052000 Sobic002G052000 Sobic001G181000--Sobic002G052000 Sobic004G206800 Sobic004G206800 Sobic001G181000--Sobic004G206800 Sobic001G181100 Sobic001G181100 Sobic001G181000--Sobic001G181100 Sobic003G005000 Sobic003G005000 Sobic001G289500--Sobic003G005000 Sobic001G491000 Sobic001G491000 Sobic001G289500--Sobic001G491000 Sobic004G202200 Sobic004G202200 Sobic001G289500--Sobic004G202200 Sobic006G238200 Sobic006G238200 Sobic001G289500--Sobic006G238200 Sobic006G102000 Sobic006G102000 Sobic001G289500--Sobic006G102000 Sobic010G181300 Sobic010G181300 Sobic001G289500--Sobic010G181300 Sobic007G108900 Sobic007G108900 Sobic001G289500--Sobic007G108900 Sobic003G094100 Sobic003G094100 Sobic001G289500--Sobic003G094100 Sobic002G275300 Sobic002G275300 Sobic001G289500--Sobic002G275300 Sobic004G219400 Sobic004G219400 Sobic002G381700--Sobic004G219400 Sobic002G295100 Sobic002G295100 Sobic002G381700--Sobic002G295100 Sobic001G498000 Sobic001G498000 Sobic002G381700--Sobic001G498000 Sobic002G381700--Sobic008G064700 Sobic003G425300 Sobic003G425300 Sobic002G381700--Sobic003G425300 Sobic002G381700--Sobic003G269300 Sobic003G313900 Sobic003G313900 Sobic002G381700--Sobic003G313900 Sobic004G323400 Sobic004G323400 Sobic002G381700--Sobic004G323400 Sobic001G057700 Sobic001G057700 Sobic002G381700--Sobic001G057700 Sobic008G064700--Sobic003G269300 Sobic008G064700--Sobic003G228300 Sobic008G064700--Sobic002G382700 Sobic008G064700--Sobic006G221000 Sobic008G064700--Sobic001G485100 Sobic010G249700 Sobic010G249700 Sobic008G064700--Sobic010G249700 Sobic008G064700--Sobic001G046000 Sobic001G283100 Sobic001G283100 Sobic008G064700--Sobic001G283100 Sobic008G064700--Sobic001G207800 Sobic007G161500 Sobic007G161500 Sobic002G314300--Sobic007G161500 Sobic003G370000 Sobic003G370000 Sobic002G314300--Sobic003G370000 Sobic002G314300--Sobic001G289500 Sobic008G064500 Sobic008G064500 Sobic002G314300--Sobic008G064500 Sobic005G056400 Sobic005G056400 Sobic002G314300--Sobic005G056400 Sobic002G306800 Sobic002G306800 Sobic002G314300--Sobic002G306800 Sobic001G020100 Sobic001G020100 Sobic002G314300--Sobic001G020100 Sobic009G129300 Sobic009G129300 Sobic002G314300--Sobic009G129300 Sobic002G314300--Sobic001G491000 Sobic008G053200 Sobic008G053200 Sobic004G238600--Sobic008G053200 Sobic004G283100 Sobic004G283100 Sobic004G238600--Sobic004G283100 Sobic004G305800 Sobic004G305800 Sobic004G238600--Sobic004G305800 Sobic004G238600--Sobic003G370000 Sobic004G238600--Sobic002G370600 Sobic004G238600--Sobic007G161500 Sobic001G329400 Sobic001G329400 Sobic004G238600--Sobic001G329400 Sobic004G272100 Sobic004G272100 Sobic004G238600--Sobic004G272100 Sobic001G519800 Sobic001G519800 Sobic004G238600--Sobic001G519800 Sobic002G382700--Sobic001G207800 Sobic001G258200 Sobic001G258200 Sobic002G382700--Sobic001G258200 Sobic006G090100 Sobic006G090100 Sobic002G382700--Sobic006G090100 Sobic003G341300 Sobic003G341300 Sobic002G382700--Sobic003G341300 Sobic002G382700--Sobic001G283100 Sobic007G058100 Sobic007G058100 Sobic002G382700--Sobic007G058100 Sobic001G077300 Sobic001G077300 Sobic002G382700--Sobic001G077300 Sobic002G162400 Sobic002G162400 Sobic002G382700--Sobic002G162400 Sobic007G227100 Sobic007G227100 Sobic002G382700--Sobic007G227100
Octagon: transcription factors


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