Gene annotation
Transcriptome id Sobic.003G046800.1
Synonym Sb03g004090
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5XMT5
Pfam PF00249
Panther DB PTHR31003 PTHR31003:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G03500 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os01g08160.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a023206
Brachypodium KQK02985 , KQJ86079
Barley HORVU2Hr1G062670.7 , HORVU2Hr1G062670.4 , HORVU3Hr1G022960.6 , HORVU3Hr1G022960.7 , HORVU3Hr1G022960.4 , HORVU3Hr1G022960.5 , HORVU3Hr1G022960.2 , HORVU3Hr1G022960.3 , HORVU3Hr1G022960.1 , HORVU3Hr1G022960.8 , HORVU2Hr1G062670.6 , HORVU5Hr1G018220.8 , HORVU5Hr1G018220.9 , HORVU5Hr1G018220.2 , HORVU5Hr1G018220.3 , HORVU5Hr1G018220.6 , HORVU5Hr1G018220.4 , HORVU5Hr1G018220.5 , HORVU3Hr1G022960.9 , HORVU5Hr1G018220.10 , HORVU5Hr1G018220.11 , HORVU5Hr1G018220.12 , HORVU5Hr1G018220.13
Wheat TraesCS2D02G259200 , TraesCS3A02G123700 , TraesCS5D02G081000 , TraesCS3D02G125300 , TraesCS2B02G277300 , TraesCS2D02G259200 , TraesCS2A02G264800 , TraesCS2A02G264800 , TraesCS3B02G144100 , TraesCS5B02G075300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G403100 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
2 Sobic.006G188900 GRAS family transcription factor domain containing protein, expressed -
3 Sobic.001G020500 lectin protein kinase family protein, putative, expressed -
4 Sobic.001G160200 expressed protein -
5 Sobic.008G166700 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
6 Sobic.004G307700 cyclin-dependent kinase inhibitor, putative, expressed -
7 Sobic.008G059400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
8 Sobic.002G192101 - -
9 Sobic.001G041500 basic helix-loop-helix, putative, expressed -
10 Sobic.010G054500 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
11 Sobic.001G145100 RIO1 family protein, expressed K08818: cell division cycle 2-like
12 Sobic.004G251300 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
13 Sobic.006G195200 purine permease, putative, expressed -
14 Sobic.005G090600 peptide transporter PTR2, putative, expressed -
15 Sobic.010G197700 cytochrome P450, putative, expressed -
16 Sobic.001G531700 armadillo, putative, expressed -
17 Sobic.001G031000 RD26, putative, expressed -
18 Sobic.001G336500 6-phosphogluconolactonase, putative, expressed K01057: PGLS, pgl, 6-phosphogluconolactonase
19 Sobic.005G158000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
20 Sobic.008G147101 - -


Gene co-expression network
sample Sobic003G046800 Sobic003G046800 Sobic002G403100 Sobic002G403100 Sobic003G046800--Sobic002G403100 Sobic006G188900 Sobic006G188900 Sobic003G046800--Sobic006G188900 Sobic001G020500 Sobic001G020500 Sobic003G046800--Sobic001G020500 Sobic001G160200 Sobic001G160200 Sobic003G046800--Sobic001G160200 Sobic008G166700 Sobic008G166700 Sobic003G046800--Sobic008G166700 Sobic004G307700 Sobic004G307700 Sobic003G046800--Sobic004G307700 Sobic008G059400 Sobic008G059400 Sobic003G046800--Sobic008G059400 Sobic002G192101 Sobic002G192101 Sobic003G046800--Sobic002G192101 Sobic001G041500 Sobic001G041500 Sobic003G046800--Sobic001G041500 Sobic002G330800 Sobic002G330800 Sobic002G403100--Sobic002G330800 Sobic009G254400 Sobic009G254400 Sobic002G403100--Sobic009G254400 Sobic003G128500 Sobic003G128500 Sobic002G403100--Sobic003G128500 Sobic002G306300 Sobic002G306300 Sobic002G403100--Sobic002G306300 Sobic008G163800 Sobic008G163800 Sobic002G403100--Sobic008G163800 Sobic010G267650 Sobic010G267650 Sobic002G403100--Sobic010G267650 Sobic003G397000 Sobic003G397000 Sobic002G403100--Sobic003G397000 Sobic008G145300 Sobic008G145300 Sobic002G403100--Sobic008G145300 Sobic001G263500 Sobic001G263500 Sobic002G403100--Sobic001G263500 Sobic006G182800 Sobic006G182800 Sobic006G188900--Sobic006G182800 Sobic006G188900--Sobic003G046800 Sobic006G188900--Sobic001G160200 Sobic010G076500 Sobic010G076500 Sobic006G188900--Sobic010G076500 Sobic005G061000 Sobic005G061000 Sobic006G188900--Sobic005G061000 Sobic001G396300 Sobic001G396300 Sobic006G188900--Sobic001G396300 Sobic009G195800 Sobic009G195800 Sobic006G188900--Sobic009G195800 Sobic006G188900--Sobic001G020500 Sobic010G233400 Sobic010G233400 Sobic006G188900--Sobic010G233400 Sobic001G020500--Sobic004G307700 Sobic006G195200 Sobic006G195200 Sobic001G020500--Sobic006G195200 Sobic001G296300 Sobic001G296300 Sobic001G020500--Sobic001G296300 Sobic003G118900 Sobic003G118900 Sobic001G020500--Sobic003G118900 Sobic004G334100 Sobic004G334100 Sobic001G020500--Sobic004G334100 Sobic005G052000 Sobic005G052000 Sobic001G020500--Sobic005G052000 Sobic005G098200 Sobic005G098200 Sobic001G020500--Sobic005G098200 Sobic006G087200 Sobic006G087200 Sobic001G020500--Sobic006G087200 Sobic010G108500 Sobic010G108500 Sobic001G020500--Sobic010G108500 Sobic007G153001 Sobic007G153001 Sobic001G160200--Sobic007G153001 Sobic001G075101 Sobic001G075101 Sobic001G160200--Sobic001G075101 Sobic007G169600 Sobic007G169600 Sobic001G160200--Sobic007G169600 Sobic001G106000 Sobic001G106000 Sobic001G160200--Sobic001G106000 Sobic003G040800 Sobic003G040800 Sobic001G160200--Sobic003G040800 Sobic001G509400 Sobic001G509400 Sobic001G160200--Sobic001G509400 Sobic002G023900 Sobic002G023900 Sobic001G160200--Sobic002G023900 Sobic002G342100 Sobic002G342100 Sobic001G160200--Sobic002G342100 Sobic003G083000 Sobic003G083000 Sobic001G160200--Sobic003G083000 Sobic001G109100 Sobic001G109100 Sobic008G166700--Sobic001G109100 Sobic003G423300 Sobic003G423300 Sobic008G166700--Sobic003G423300 Sobic006G114200 Sobic006G114200 Sobic008G166700--Sobic006G114200 Sobic003G409300 Sobic003G409300 Sobic008G166700--Sobic003G409300 Sobic001G140200 Sobic001G140200 Sobic008G166700--Sobic001G140200 Sobic008G065800 Sobic008G065800 Sobic008G166700--Sobic008G065800 Sobic002G216400 Sobic002G216400 Sobic008G166700--Sobic002G216400 Sobic008G109100 Sobic008G109100 Sobic008G166700--Sobic008G109100 Sobic001G095750 Sobic001G095750 Sobic008G166700--Sobic001G095750 Sobic004G307700--Sobic001G020500 Sobic002G046700 Sobic002G046700 Sobic004G307700--Sobic002G046700 Sobic006G122900 Sobic006G122900 Sobic004G307700--Sobic006G122900 Sobic010G136900 Sobic010G136900 Sobic004G307700--Sobic010G136900 Sobic002G293900 Sobic002G293900 Sobic004G307700--Sobic002G293900 Sobic007G124000 Sobic007G124000 Sobic004G307700--Sobic007G124000 Sobic008G147101 Sobic008G147101 Sobic004G307700--Sobic008G147101 Sobic004G307700--Sobic010G108500 Sobic004G033900 Sobic004G033900 Sobic004G307700--Sobic004G033900 Sobic007G064800 Sobic007G064800 Sobic008G059400--Sobic007G064800 Sobic007G124100 Sobic007G124100 Sobic008G059400--Sobic007G124100 Sobic002G160600 Sobic002G160600 Sobic008G059400--Sobic002G160600 Sobic010G197700 Sobic010G197700 Sobic008G059400--Sobic010G197700 Sobic001G161200 Sobic001G161200 Sobic008G059400--Sobic001G161200 Sobic010G268200 Sobic010G268200 Sobic008G059400--Sobic010G268200 Sobic008G059400--Sobic001G109100 Sobic004G176900 Sobic004G176900 Sobic008G059400--Sobic004G176900 Sobic002G207300 Sobic002G207300 Sobic008G059400--Sobic002G207300 Sobic002G192101--Sobic001G109100 Sobic004G337500 Sobic004G337500 Sobic002G192101--Sobic004G337500 Sobic001G145100 Sobic001G145100 Sobic002G192101--Sobic001G145100 Sobic009G188800 Sobic009G188800 Sobic002G192101--Sobic009G188800 Sobic002G192101--Sobic010G076500 Sobic002G192101--Sobic001G095750 Sobic004G275100 Sobic004G275100 Sobic002G192101--Sobic004G275100 Sobic001G044800 Sobic001G044800 Sobic002G192101--Sobic001G044800 Sobic002G192101--Sobic008G166700 Sobic001G041500--Sobic002G023900 Sobic004G244100 Sobic004G244100 Sobic001G041500--Sobic004G244100 Sobic006G026400 Sobic006G026400 Sobic001G041500--Sobic006G026400 Sobic001G041500--Sobic004G176900 Sobic006G203000 Sobic006G203000 Sobic001G041500--Sobic006G203000 Sobic002G037400 Sobic002G037400 Sobic001G041500--Sobic002G037400 Sobic008G059000 Sobic008G059000 Sobic001G041500--Sobic008G059000 Sobic009G076700 Sobic009G076700 Sobic001G041500--Sobic009G076700 Sobic009G076500 Sobic009G076500 Sobic001G041500--Sobic009G076500
Octagon: transcription factors


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