Gene annotation
Transcriptome id Sobic.001G031000.1
Synonym Sb01g002900
Functional annotation RD26, putative, expressed
UniProt C5WUY1
Pfam PF02365
Panther DB PTHR31989 PTHR31989:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g61249.1 : RD26, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G377300 POEI49 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
2 Sobic.005G158000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
3 Sobic.002G216400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.007G064800 "Production of (E)-b-caryophyllene, cytoplasm"(PubMedID : 21880075)@Protein terpene synthase 6 (Os)(PubMedID : 27208977)@terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
5 Sobic.010G063100 - -
6 Sobic.007G155300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bHelix-loop-helix transcription factor, putative, expressed -
7 Sobic.004G018900 terpene synthase, putative, expressed K15086: (3S)-linalool synthase
8 Sobic.007G055700 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@Protein terpene synthase 10 (Os)(PubMedID : 27208977)@terpene synthase, putative, expressed -
9 Sobic.003G305800 expressed protein -
10 Sobic.003G046800 MYB family transcription factor, putative, expressed -
11 Sobic.008G166700 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
12 Sobic.004G245300 - -
13 Sobic.006G090300 Negative regulator of cytokinine(PubMedID : 30367619)@OsRR1 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
14 Sobic.010G171900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase (Os)(PubMedID : 27208977)@L-ascorbate oxidase precursor, putative, expressed -
15 Sobic.002G008600 WRKY29, expressed -
16 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -
17 Sobic.001G123800 expressed protein -
18 Sobic.010G253500 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
19 Sobic.002G110000 glycosyl hydrolase, putative, expressed K01183: chitinase
20 Sobic.001G164100 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic001G031000 Sobic001G031000 Sobic001G377300 Sobic001G377300 Sobic001G031000--Sobic001G377300 Sobic005G158000 Sobic005G158000 Sobic001G031000--Sobic005G158000 Sobic002G216400 Sobic002G216400 Sobic001G031000--Sobic002G216400 Sobic007G064800 Sobic007G064800 Sobic001G031000--Sobic007G064800 Sobic010G063100 Sobic010G063100 Sobic001G031000--Sobic010G063100 Sobic007G155300 Sobic007G155300 Sobic001G031000--Sobic007G155300 Sobic004G018900 Sobic004G018900 Sobic001G031000--Sobic004G018900 Sobic007G055700 Sobic007G055700 Sobic001G031000--Sobic007G055700 Sobic003G305800 Sobic003G305800 Sobic001G031000--Sobic003G305800 Sobic001G377300--Sobic002G216400 Sobic010G231900 Sobic010G231900 Sobic001G377300--Sobic010G231900 Sobic007G152800 Sobic007G152800 Sobic001G377300--Sobic007G152800 Sobic001G377300--Sobic007G064800 Sobic006G163900 Sobic006G163900 Sobic001G377300--Sobic006G163900 Sobic001G377300--Sobic010G063100 Sobic003G105700 Sobic003G105700 Sobic001G377300--Sobic003G105700 Sobic010G199900 Sobic010G199900 Sobic001G377300--Sobic010G199900 Sobic001G377300--Sobic001G031000 Sobic001G164100 Sobic001G164100 Sobic005G158000--Sobic001G164100 Sobic010G253500 Sobic010G253500 Sobic005G158000--Sobic010G253500 Sobic001G210200 Sobic001G210200 Sobic005G158000--Sobic001G210200 Sobic001G110900 Sobic001G110900 Sobic002G216400--Sobic001G110900 Sobic001G095750 Sobic001G095750 Sobic002G216400--Sobic001G095750 Sobic006G220300 Sobic006G220300 Sobic002G216400--Sobic006G220300 Sobic002G013900 Sobic002G013900 Sobic002G216400--Sobic002G013900 Sobic003G131500 Sobic003G131500 Sobic002G216400--Sobic003G131500 Sobic006G114200 Sobic006G114200 Sobic002G216400--Sobic006G114200 Sobic006G203000 Sobic006G203000 Sobic002G216400--Sobic006G203000 Sobic002G110200 Sobic002G110200 Sobic002G216400--Sobic002G110200 Sobic003G234800 Sobic003G234800 Sobic002G216400--Sobic003G234800 Sobic002G160600 Sobic002G160600 Sobic007G064800--Sobic002G160600 Sobic007G183100 Sobic007G183100 Sobic007G064800--Sobic007G183100 Sobic007G064800--Sobic002G216400 Sobic005G218500 Sobic005G218500 Sobic007G064800--Sobic005G218500 Sobic004G176900 Sobic004G176900 Sobic007G064800--Sobic004G176900 Sobic008G059400 Sobic008G059400 Sobic007G064800--Sobic008G059400 Sobic008G075400 Sobic008G075400 Sobic007G064800--Sobic008G075400 Sobic007G064800--Sobic001G095750 Sobic001G462800 Sobic001G462800 Sobic007G064800--Sobic001G462800 Sobic005G094200 Sobic005G094200 Sobic010G063100--Sobic005G094200 Sobic001G342600 Sobic001G342600 Sobic010G063100--Sobic001G342600 Sobic010G054500 Sobic010G054500 Sobic010G063100--Sobic010G054500 Sobic010G197700 Sobic010G197700 Sobic010G063100--Sobic010G197700 Sobic008G052500 Sobic008G052500 Sobic010G063100--Sobic008G052500 Sobic006G208100 Sobic006G208100 Sobic010G063100--Sobic006G208100 Sobic009G016633 Sobic009G016633 Sobic010G063100--Sobic009G016633 Sobic010G063100--Sobic006G163900 Sobic005G016900 Sobic005G016900 Sobic010G063100--Sobic005G016900 Sobic007G155300--Sobic004G018900 Sobic008G080600 Sobic008G080600 Sobic007G155300--Sobic008G080600 Sobic008G067200 Sobic008G067200 Sobic007G155300--Sobic008G067200 Sobic006G027500 Sobic006G027500 Sobic007G155300--Sobic006G027500 Sobic010G171900 Sobic010G171900 Sobic007G155300--Sobic010G171900 Sobic008G080400 Sobic008G080400 Sobic007G155300--Sobic008G080400 Sobic009G254600 Sobic009G254600 Sobic007G155300--Sobic009G254600 Sobic010G038500 Sobic010G038500 Sobic007G155300--Sobic010G038500 Sobic005G118300 Sobic005G118300 Sobic007G155300--Sobic005G118300 Sobic004G018900--Sobic010G171900 Sobic004G018900--Sobic006G027500 Sobic005G186500 Sobic005G186500 Sobic004G018900--Sobic005G186500 Sobic004G018900--Sobic008G080600 Sobic004G245300 Sobic004G245300 Sobic004G018900--Sobic004G245300 Sobic008G060200 Sobic008G060200 Sobic004G018900--Sobic008G060200 Sobic005G065500 Sobic005G065500 Sobic004G018900--Sobic005G065500 Sobic006G180800 Sobic006G180800 Sobic004G018900--Sobic006G180800 Sobic004G019100 Sobic004G019100 Sobic004G018900--Sobic004G019100 Sobic007G055700--Sobic005G016900 Sobic007G073750 Sobic007G073750 Sobic007G055700--Sobic007G073750 Sobic007G055700--Sobic010G253500 Sobic007G055700--Sobic001G164100 Sobic007G143100 Sobic007G143100 Sobic007G055700--Sobic007G143100 Sobic003G397400 Sobic003G397400 Sobic007G055700--Sobic003G397400 Sobic007G143200 Sobic007G143200 Sobic007G055700--Sobic007G143200 Sobic009G068900 Sobic009G068900 Sobic007G055700--Sobic009G068900 Sobic007G055700--Sobic005G158000 Sobic002G008600 Sobic002G008600 Sobic003G305800--Sobic002G008600 Sobic008G114200 Sobic008G114200 Sobic003G305800--Sobic008G114200 Sobic002G251200 Sobic002G251200 Sobic003G305800--Sobic002G251200 Sobic010G215700 Sobic010G215700 Sobic003G305800--Sobic010G215700 Sobic007G206000 Sobic007G206000 Sobic003G305800--Sobic007G206000 Sobic010G236000 Sobic010G236000 Sobic003G305800--Sobic010G236000 Sobic001G266100 Sobic001G266100 Sobic003G305800--Sobic001G266100 Sobic007G049100 Sobic007G049100 Sobic003G305800--Sobic007G049100 Sobic005G090100 Sobic005G090100 Sobic003G305800--Sobic005G090100
Octagon: transcription factors


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