Gene annotation
Transcriptome id Sobic.002G110000.1
Synonym CHIA, ATCHIA, Sb02g009390
Functional annotation glycosyl hydrolase, putative, expressed
UniProt A0A1W0W3B9
Pfam PF00704
Panther DB PTHR11177 PTHR11177:SF179
NCBI CDD -
KEGG Orthology K01183; chitinase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G24090 : chitinase A
RAP-DB (Rice) LOC_Os07g19040.1 : glycosyl hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a045635 , Zm00025a026760 , Zm00025a026759
Brachypodium KQK20132 , PNT72617 , KQK10704 , KQK10702 , PNT72403
Barley HORVU3Hr1G087870.1 , HORVU3Hr1G054970.1 , HORVU2Hr1G105560.1 , HORVU3Hr1G083670.2
Wheat TraesCS3D02G261700 , TraesCS3A02G261700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G090300 Negative regulator of cytokinine(PubMedID : 30367619)@OsRR1 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
2 Sobic.006G017200 Leucine Rich Repeat family protein, expressed -
3 Sobic.003G069100 regulator of ribonuclease, putative, expressed -
4 Sobic.002G285375 - -
5 Sobic.001G123800 expressed protein -
6 Sobic.003G237600 expressed protein -
7 Sobic.010G093500 CSLA3 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
8 Sobic.003G057900 ribosomal protein L5, putative, expressed -
9 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
10 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
11 Sobic.008G067200 inhibitor I family protein, putative, expressed -
12 Sobic.008G106200 cytochrome P450, putative, expressed -
13 Sobic.003G036100 - -
14 Sobic.009G222200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
15 Sobic.001G338500 ACT domain containing protein, expressed -
16 Sobic.006G090400 OsRR1 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
17 Sobic.004G026300 heat shock protein 18.2(PubMedID : 26465154)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
18 Sobic.001G068400 - -
19 Sobic.008G080400 "cyanogenic beta-glucosidase dhurrinase, up-regulated under drought stress "(PubMedID : 24655390)@Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
20 Sobic.010G276400 "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase


Gene co-expression network
sample Sobic002G110000 Sobic002G110000 Sobic006G090300 Sobic006G090300 Sobic002G110000--Sobic006G090300 Sobic006G017200 Sobic006G017200 Sobic002G110000--Sobic006G017200 Sobic003G069100 Sobic003G069100 Sobic002G110000--Sobic003G069100 Sobic002G285375 Sobic002G285375 Sobic002G110000--Sobic002G285375 Sobic001G123800 Sobic001G123800 Sobic002G110000--Sobic001G123800 Sobic003G237600 Sobic003G237600 Sobic002G110000--Sobic003G237600 Sobic010G093500 Sobic010G093500 Sobic002G110000--Sobic010G093500 Sobic003G057900 Sobic003G057900 Sobic002G110000--Sobic003G057900 Sobic001G189100 Sobic001G189100 Sobic002G110000--Sobic001G189100 Sobic006G090400 Sobic006G090400 Sobic006G090300--Sobic006G090400 Sobic009G243500 Sobic009G243500 Sobic006G090300--Sobic009G243500 Sobic002G213000 Sobic002G213000 Sobic006G090300--Sobic002G213000 Sobic005G030500 Sobic005G030500 Sobic006G090300--Sobic005G030500 Sobic006G090300--Sobic003G237600 Sobic001G068400 Sobic001G068400 Sobic006G090300--Sobic001G068400 Sobic006G090300--Sobic001G189100 Sobic010G030800 Sobic010G030800 Sobic006G090300--Sobic010G030800 Sobic006G017200--Sobic003G069100 Sobic010G276400 Sobic010G276400 Sobic006G017200--Sobic010G276400 Sobic004G026300 Sobic004G026300 Sobic006G017200--Sobic004G026300 Sobic003G199800 Sobic003G199800 Sobic006G017200--Sobic003G199800 Sobic003G234400 Sobic003G234400 Sobic006G017200--Sobic003G234400 Sobic007G171600 Sobic007G171600 Sobic006G017200--Sobic007G171600 Sobic010G019700 Sobic010G019700 Sobic006G017200--Sobic010G019700 Sobic010G095000 Sobic010G095000 Sobic006G017200--Sobic010G095000 Sobic002G233300 Sobic002G233300 Sobic006G017200--Sobic002G233300 Sobic003G069100--Sobic007G171600 Sobic008G067200 Sobic008G067200 Sobic003G069100--Sobic008G067200 Sobic003G069100--Sobic010G276400 Sobic003G069100--Sobic004G026300 Sobic002G000500 Sobic002G000500 Sobic003G069100--Sobic002G000500 Sobic003G069100--Sobic010G019700 Sobic003G069100--Sobic001G068400 Sobic001G379700 Sobic001G379700 Sobic003G069100--Sobic001G379700 Sobic003G069100--Sobic003G057900 Sobic006G011100 Sobic006G011100 Sobic002G285375--Sobic006G011100 Sobic004G026700 Sobic004G026700 Sobic002G285375--Sobic004G026700 Sobic001G274600 Sobic001G274600 Sobic002G285375--Sobic001G274600 Sobic002G285375--Sobic002G000500 Sobic002G285375--Sobic001G068400 Sobic002G285375--Sobic009G243500 Sobic003G209800 Sobic003G209800 Sobic002G285375--Sobic003G209800 Sobic001G361700 Sobic001G361700 Sobic002G285375--Sobic001G361700 Sobic010G109500 Sobic010G109500 Sobic002G285375--Sobic010G109500 Sobic009G244600 Sobic009G244600 Sobic001G123800--Sobic009G244600 Sobic004G267000 Sobic004G267000 Sobic001G123800--Sobic004G267000 Sobic001G123800--Sobic001G189100 Sobic006G006700 Sobic006G006700 Sobic001G123800--Sobic006G006700 Sobic007G198200 Sobic007G198200 Sobic001G123800--Sobic007G198200 Sobic003G231800 Sobic003G231800 Sobic001G123800--Sobic003G231800 Sobic001G123800--Sobic003G237600 Sobic003G036100 Sobic003G036100 Sobic001G123800--Sobic003G036100 Sobic003G237600--Sobic001G189100 Sobic001G355600 Sobic001G355600 Sobic003G237600--Sobic001G355600 Sobic003G237600--Sobic003G036100 Sobic009G254600 Sobic009G254600 Sobic003G237600--Sobic009G254600 Sobic009G222200 Sobic009G222200 Sobic003G237600--Sobic009G222200 Sobic010G183100 Sobic010G183100 Sobic003G237600--Sobic010G183100 Sobic004G035700 Sobic004G035700 Sobic003G237600--Sobic004G035700 Sobic008G106200 Sobic008G106200 Sobic003G237600--Sobic008G106200 Sobic006G127350 Sobic006G127350 Sobic010G093500--Sobic006G127350 Sobic010G093500--Sobic010G030800 Sobic004G095000 Sobic004G095000 Sobic010G093500--Sobic004G095000 Sobic010G093500--Sobic003G069100 Sobic010G093500--Sobic008G067200 Sobic001G300800 Sobic001G300800 Sobic010G093500--Sobic001G300800 Sobic005G202600 Sobic005G202600 Sobic010G093500--Sobic005G202600 Sobic008G105850 Sobic008G105850 Sobic010G093500--Sobic008G105850 Sobic003G131000 Sobic003G131000 Sobic010G093500--Sobic003G131000 Sobic001G192100 Sobic001G192100 Sobic003G057900--Sobic001G192100 Sobic010G006350 Sobic010G006350 Sobic003G057900--Sobic010G006350 Sobic009G132900 Sobic009G132900 Sobic003G057900--Sobic009G132900 Sobic003G057900--Sobic003G131000 Sobic008G080400 Sobic008G080400 Sobic003G057900--Sobic008G080400 Sobic010G094301 Sobic010G094301 Sobic003G057900--Sobic010G094301 Sobic006G136500 Sobic006G136500 Sobic003G057900--Sobic006G136500 Sobic001G198800 Sobic001G198800 Sobic003G057900--Sobic001G198800 Sobic006G234100 Sobic006G234100 Sobic003G057900--Sobic006G234100 Sobic001G189100--Sobic001G189100 Sobic001G189100--Sobic003G237600 Sobic001G189100--Sobic009G254600 Sobic001G189100--Sobic003G036100 Sobic001G189100--Sobic001G355600 Sobic001G189100--Sobic010G183100 Sobic001G189100--Sobic009G222200 Sobic001G189100--Sobic004G035700 Sobic001G189100--Sobic008G106200
Octagon: transcription factors


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