Gene annotation
Transcriptome id Sobic.006G017200.1
Synonym Sb06g001640
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt C5YC83
Pfam -
Panther DB PTHR23155 PTHR23155:SF498
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G51630 : Disease resistance protein (TIR-NBS-LRR class) family
RAP-DB (Rice) LOC_Os04g08390.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G000190.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G069100 regulator of ribonuclease, putative, expressed -
2 Sobic.010G276400 "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
3 Sobic.004G026300 heat shock protein 18.2(PubMedID : 26465154)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
4 Sobic.003G199800 expressed protein -
5 Sobic.003G234400 CA(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
6 Sobic.007G171600 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
7 Sobic.010G019700 cytochrome P450 86A1, putative, expressed -
8 Sobic.010G095000 kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
9 Sobic.002G233300 Cupredoxin superfamily protein(PubMedID : 26465154)@plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.002G000500 isoflavone reductase, putative, expressed -
11 Sobic.002G094800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.007G132000 MYB family transcription factor, putative, expressed -
13 Sobic.008G021300 Unnamed(PubMedID : 24676859)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
14 Sobic.004G023200 Polyketide cyclase/dehydrase and lipid transport superfamily protein(PubMedID : 26465154)@membrane related protein CP5, putative, expressed -
15 Sobic.010G109500 expressed protein -
16 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
17 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
18 Sobic.001G068400 - -
19 Sobic.003G057900 ribosomal protein L5, putative, expressed -
20 Sobic.001G338500 ACT domain containing protein, expressed -


Gene co-expression network
sample Sobic006G017200 Sobic006G017200 Sobic003G069100 Sobic003G069100 Sobic006G017200--Sobic003G069100 Sobic010G276400 Sobic010G276400 Sobic006G017200--Sobic010G276400 Sobic004G026300 Sobic004G026300 Sobic006G017200--Sobic004G026300 Sobic003G199800 Sobic003G199800 Sobic006G017200--Sobic003G199800 Sobic003G234400 Sobic003G234400 Sobic006G017200--Sobic003G234400 Sobic007G171600 Sobic007G171600 Sobic006G017200--Sobic007G171600 Sobic010G019700 Sobic010G019700 Sobic006G017200--Sobic010G019700 Sobic010G095000 Sobic010G095000 Sobic006G017200--Sobic010G095000 Sobic002G233300 Sobic002G233300 Sobic006G017200--Sobic002G233300 Sobic003G069100--Sobic007G171600 Sobic008G067200 Sobic008G067200 Sobic003G069100--Sobic008G067200 Sobic003G069100--Sobic010G276400 Sobic003G069100--Sobic004G026300 Sobic002G000500 Sobic002G000500 Sobic003G069100--Sobic002G000500 Sobic003G069100--Sobic010G019700 Sobic001G068400 Sobic001G068400 Sobic003G069100--Sobic001G068400 Sobic001G379700 Sobic001G379700 Sobic003G069100--Sobic001G379700 Sobic003G057900 Sobic003G057900 Sobic003G069100--Sobic003G057900 Sobic010G109500 Sobic010G109500 Sobic010G276400--Sobic010G109500 Sobic010G276400--Sobic003G199800 Sobic010G276400--Sobic002G000500 Sobic002G040100 Sobic002G040100 Sobic010G276400--Sobic002G040100 Sobic006G234100 Sobic006G234100 Sobic010G276400--Sobic006G234100 Sobic010G276400--Sobic001G068400 Sobic008G038300 Sobic008G038300 Sobic010G276400--Sobic008G038300 Sobic010G276400--Sobic007G171600 Sobic003G209800 Sobic003G209800 Sobic010G276400--Sobic003G209800 Sobic003G131000 Sobic003G131000 Sobic004G026300--Sobic003G131000 Sobic004G026300--Sobic010G276400 Sobic004G026300--Sobic003G199800 Sobic004G026300--Sobic003G234400 Sobic010G038500 Sobic010G038500 Sobic004G026300--Sobic010G038500 Sobic001G111700 Sobic001G111700 Sobic004G026300--Sobic001G111700 Sobic004G026300--Sobic001G068400 Sobic004G026300--Sobic002G040100 Sobic004G026300--Sobic003G069100 Sobic003G199800--Sobic002G040100 Sobic003G199800--Sobic010G276400 Sobic003G199800--Sobic002G000500 Sobic010G183100 Sobic010G183100 Sobic003G199800--Sobic010G183100 Sobic004G035500 Sobic004G035500 Sobic003G199800--Sobic004G035500 Sobic003G199800--Sobic008G038300 Sobic003G199800--Sobic010G109500 Sobic007G189700 Sobic007G189700 Sobic003G199800--Sobic007G189700 Sobic009G191300 Sobic009G191300 Sobic003G199800--Sobic009G191300 Sobic006G008700 Sobic006G008700 Sobic003G234400--Sobic006G008700 Sobic003G234400--Sobic010G095000 Sobic003G303700 Sobic003G303700 Sobic003G234400--Sobic003G303700 Sobic008G021300 Sobic008G021300 Sobic003G234400--Sobic008G021300 Sobic004G353700 Sobic004G353700 Sobic003G234400--Sobic004G353700 Sobic008G061401 Sobic008G061401 Sobic003G234400--Sobic008G061401 Sobic001G076900 Sobic001G076900 Sobic003G234400--Sobic001G076900 Sobic003G234400--Sobic004G026300 Sobic010G201700 Sobic010G201700 Sobic003G234400--Sobic010G201700 Sobic007G171600--Sobic002G000500 Sobic007G171600--Sobic003G069100 Sobic007G171600--Sobic010G109500 Sobic007G171600--Sobic010G276400 Sobic007G171600--Sobic003G199800 Sobic004G023200 Sobic004G023200 Sobic007G171600--Sobic004G023200 Sobic007G171600--Sobic002G040100 Sobic001G338700 Sobic001G338700 Sobic007G171600--Sobic001G338700 Sobic007G171600--Sobic006G234100 Sobic009G196800 Sobic009G196800 Sobic010G019700--Sobic009G196800 Sobic010G019700--Sobic004G023200 Sobic010G019700--Sobic004G026300 Sobic010G019700--Sobic003G069100 Sobic002G098800 Sobic002G098800 Sobic010G019700--Sobic002G098800 Sobic010G019700--Sobic007G171600 Sobic010G019700--Sobic003G199800 Sobic001G069000 Sobic001G069000 Sobic010G019700--Sobic001G069000 Sobic002G180400 Sobic002G180400 Sobic010G019700--Sobic002G180400 Sobic010G095000--Sobic001G076900 Sobic010G095000--Sobic003G234400 Sobic010G095000--Sobic006G008700 Sobic005G056400 Sobic005G056400 Sobic010G095000--Sobic005G056400 Sobic010G153900 Sobic010G153900 Sobic010G095000--Sobic010G153900 Sobic004G305800 Sobic004G305800 Sobic010G095000--Sobic004G305800 Sobic010G095000--Sobic010G201700 Sobic004G125700 Sobic004G125700 Sobic010G095000--Sobic004G125700 Sobic005G200200 Sobic005G200200 Sobic010G095000--Sobic005G200200 Sobic002G233300--Sobic010G038500 Sobic002G233300--Sobic003G199800 Sobic002G233300--Sobic002G040100 Sobic001G344600 Sobic001G344600 Sobic002G233300--Sobic001G344600 Sobic002G233300--Sobic009G191300 Sobic007G034300 Sobic007G034300 Sobic002G233300--Sobic007G034300 Sobic002G233300--Sobic001G338700 Sobic001G520800 Sobic001G520800 Sobic002G233300--Sobic001G520800 Sobic002G233300--Sobic008G038300
Octagon: transcription factors


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