Gene annotation
Transcriptome id Sobic.002G285375.1
Synonym -
Functional annotation -
UniProt A0A1W0W649
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G011100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G026700 down-regulated TF in developmental senescence(PubMedID : 27586543)@transcription factor, putative, expressed K09060: plant G-box-binding factor
3 Sobic.001G274600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.002G000500 isoflavone reductase, putative, expressed -
5 Sobic.001G068400 - -
6 Sobic.009G243500 polygalacturonase, putative, expressed -
7 Sobic.003G209800 Chorophyll a/b binding protein 2(PubMedID : 26186930)@Protein chlorophyll a-b binding protein 2 (Os)(PubMedID : 27208977)@chlorophyll A-B binding protein, putative, expressed K08912: light-harvesting complex II chlorophyll a/b binding protein 1
8 Sobic.001G361700 expressed protein -
9 Sobic.010G109500 expressed protein -
10 Sobic.008G038300 uncharacterized protein ycf53, putative, expressed -
11 Sobic.010G183032 - -
12 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
13 Sobic.010G108401 - -
14 Sobic.003G052500 Photosystem I reaction center subunit XI(PubMedID : 26186930)@Photosystem I subunit L(PubMedID : 29017446)@photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed K02699: photosystem I subunit XI
15 Sobic.001G338700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
16 Sobic.001G184100 Osmotic stress potassium transporter(PubMedID : 28620409)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
17 Sobic.002G180400 isochorismate synthase 1, chloroplast precursor, putative, expressed K02552: menaquinone-specific isochorismate synthase
18 Sobic.010G276400 "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
19 Sobic.006G234100 shikimate/quinate 5-dehydrogenase, putative, expressed K02492: glutamyl-tRNA reductase
20 Sobic.007G171600 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase


Gene co-expression network
sample Sobic002G285375 Sobic002G285375 Sobic006G011100 Sobic006G011100 Sobic002G285375--Sobic006G011100 Sobic004G026700 Sobic004G026700 Sobic002G285375--Sobic004G026700 Sobic001G274600 Sobic001G274600 Sobic002G285375--Sobic001G274600 Sobic002G000500 Sobic002G000500 Sobic002G285375--Sobic002G000500 Sobic001G068400 Sobic001G068400 Sobic002G285375--Sobic001G068400 Sobic009G243500 Sobic009G243500 Sobic002G285375--Sobic009G243500 Sobic003G209800 Sobic003G209800 Sobic002G285375--Sobic003G209800 Sobic001G361700 Sobic001G361700 Sobic002G285375--Sobic001G361700 Sobic010G109500 Sobic010G109500 Sobic002G285375--Sobic010G109500 Sobic006G011100--Sobic010G109500 Sobic006G011100--Sobic002G000500 Sobic006G011100--Sobic001G274600 Sobic006G011100--Sobic003G209800 Sobic006G234100 Sobic006G234100 Sobic006G011100--Sobic006G234100 Sobic003G052500 Sobic003G052500 Sobic006G011100--Sobic003G052500 Sobic002G339200 Sobic002G339200 Sobic006G011100--Sobic002G339200 Sobic001G448400 Sobic001G448400 Sobic006G011100--Sobic001G448400 Sobic002G040100 Sobic002G040100 Sobic006G011100--Sobic002G040100 Sobic004G026700--Sobic002G000500 Sobic004G026700--Sobic001G274600 Sobic004G026700--Sobic001G361700 Sobic004G026700--Sobic002G040100 Sobic004G026700--Sobic006G011100 Sobic003G199800 Sobic003G199800 Sobic004G026700--Sobic003G199800 Sobic004G035601 Sobic004G035601 Sobic004G026700--Sobic004G035601 Sobic004G026700--Sobic003G209800 Sobic001G338700 Sobic001G338700 Sobic004G026700--Sobic001G338700 Sobic008G038300 Sobic008G038300 Sobic001G274600--Sobic008G038300 Sobic004G071800 Sobic004G071800 Sobic001G274600--Sobic004G071800 Sobic001G274600--Sobic003G209800 Sobic001G274600--Sobic006G011100 Sobic001G274600--Sobic003G052500 Sobic010G183032 Sobic010G183032 Sobic001G274600--Sobic010G183032 Sobic001G274600--Sobic002G000500 Sobic010G108401 Sobic010G108401 Sobic001G274600--Sobic010G108401 Sobic006G073500 Sobic006G073500 Sobic001G274600--Sobic006G073500 Sobic002G000500--Sobic002G040100 Sobic002G000500--Sobic006G011100 Sobic002G000500--Sobic010G109500 Sobic010G276400 Sobic010G276400 Sobic002G000500--Sobic010G276400 Sobic002G000500--Sobic003G199800 Sobic002G000500--Sobic008G038300 Sobic007G171600 Sobic007G171600 Sobic002G000500--Sobic007G171600 Sobic002G000500--Sobic003G209800 Sobic002G000500--Sobic001G274600 Sobic001G068400--Sobic002G040100 Sobic010G038500 Sobic010G038500 Sobic001G068400--Sobic010G038500 Sobic010G183100 Sobic010G183100 Sobic001G068400--Sobic010G183100 Sobic004G035700 Sobic004G035700 Sobic001G068400--Sobic004G035700 Sobic008G081200 Sobic008G081200 Sobic001G068400--Sobic008G081200 Sobic001G068400--Sobic010G276400 Sobic001G068400--Sobic002G000500 Sobic001G068400--Sobic003G199800 Sobic001G068400--Sobic010G183032 Sobic009G243500--Sobic002G040100 Sobic009G243500--Sobic006G011100 Sobic009G243500--Sobic008G038300 Sobic009G243500--Sobic002G000500 Sobic009G243500--Sobic010G109500 Sobic009G243500--Sobic001G274600 Sobic009G243500--Sobic010G276400 Sobic009G243500--Sobic001G068400 Sobic009G243500--Sobic003G209800 Sobic003G209800--Sobic003G052500 Sobic003G209800--Sobic010G109500 Sobic003G209800--Sobic001G274600 Sobic003G209800--Sobic006G011100 Sobic003G209800--Sobic008G038300 Sobic003G209800--Sobic006G234100 Sobic006G105900 Sobic006G105900 Sobic003G209800--Sobic006G105900 Sobic003G209800--Sobic004G071800 Sobic003G209800--Sobic002G000500 Sobic001G361700--Sobic004G026700 Sobic001G361700--Sobic002G000500 Sobic001G361700--Sobic001G068400 Sobic001G361700--Sobic010G183032 Sobic001G361700--Sobic002G040100 Sobic001G361700--Sobic010G108401 Sobic001G361700--Sobic010G183100 Sobic001G361700--Sobic006G011100 Sobic001G361700--Sobic010G038500 Sobic010G109500--Sobic006G234100 Sobic010G109500--Sobic001G448400 Sobic010G109500--Sobic006G011100 Sobic010G109500--Sobic003G209800 Sobic010G109500--Sobic010G276400 Sobic010G109500--Sobic002G339200 Sobic010G109500--Sobic002G000500 Sobic010G109500--Sobic003G052500 Sobic004G343300 Sobic004G343300 Sobic010G109500--Sobic004G343300
Octagon: transcription factors


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